Homoeoallelic gene Ncc-tmp of Triticum timopheevii conferring compatibility with the cytoplasm of Aegilops squarrosa in the tetraploid wheat nuclear background

Genome ◽  
2000 ◽  
Vol 43 (3) ◽  
pp. 503-511 ◽  
Author(s):  
Nobuaki Asakura ◽  
Chiharu Nakamura ◽  
Ichiro Ohtsuka
Keyword(s):  
Random Amplified Polymorphic Dna ◽  
Tetraploid Wheat ◽  
Seed Viability ◽  
Nuclear Gene ◽  
Triticum Timopheevii ◽  
Aegilops Squarrosa ◽  
Limited Degree ◽  
Group 1 Chromosomes ◽  
Marker Phenotype ◽  
Group 1

A nuclear gene, Ncc-tmp1A, of Triticum timopheevii is required for the nucleus-cytoplasm (NC) compatibility in tetraploid NC hybrids with the cytoplasm of Aegilops squarrosa. A euploid NC hybrid of T. durum was previously produced by introgressing the gene from chromosome 1A of T. timopheevii. To examine the possible presence of a functional homoeoallele in the G genome of T. timopheevii, segregation of seed viability was studied as a marker phenotype in BC1s involving the two types of NC hybrids, (Ae. squarrosa) - T. timopheevii and (Ae. squarrosa) - T. turgidum. The result of these test crosses suggested that the G genome possesses a functional homoeoallele Ncc-tmp1G. Segregation of two RAPD (random amplified polymorphic DNA) markers that were closely linked to Ncc-tmp1A was further studied among the viable BC1s obtained from a test cross of (Ae. squarrosa) - T. timopheevii × T. turgidum. Some viable BC1 segregants without the markers were obtained, suggesting a limited degree of transmission of chromosome 1G carrying Ncc-tmp1G. However, a similar RAPD analysis of BC1s obtained after backcrosses of reciprocal F1s of T. timopheevii / T. turgidum with T. turgidum showed random marker segregation. Thus, it was concluded that Ncc-tmp1A is not required for compatibility with its own cytoplasm. Southern blot analysis of the euploid NC hybrid using RFLP (restriction fragment length polymorphism) markers on the homoeologous group 1 chromosomes showed that Ncc-tmp1A locates in the centromeric region.Key words: nucleus-cytoplasm (NC) compatibility, Ncc genes, Aegilops squarrosa, Triticum timopheevii, durum wheat.

RAPD markers linked to the nuclear gene from Triticum timopheevii that confers compatibility with Aegilops squarrosa cytoplasm on alloplasmic durum wheat

Genome ◽  
1997 ◽  
Vol 40 (2) ◽  
pp. 201-210 ◽  
Author(s):  
Nobuaki Asakura ◽  
Chiharu Nakamura ◽  
Ichiro Ohtsuka
Keyword(s):  
Durum Wheat ◽  
Rapd Markers ◽  
Random Amplified Polymorphic Dna ◽  
Rapd Marker ◽  
Repetitive Sequences ◽  
Tetraploid Wheat ◽  
Nuclear Gene ◽  
Triticum Timopheevii ◽  
Wide Range ◽  
Aegilops Squarrosa

Alien cytoplasms cause a wide range of phenotypic alterations in the nucleus–cytoplasm (NC) hybrids in the Triticeae. Nuclear genomes of timopheevii wheat (Triticum timopheevii and Triticum araraticum) are fully compatible with the cytoplasm of Aegilops squarrosa, while those of a majority of emmer or durum wheat cultivars and more than half the wild emmer wheats are incompatible, and a maternal 1D chromosome is required to restore seed viability and male fertility in the NC hybrids. A euploid NC hybrid of Triticum durum cv. Langdon with Ae. squarrosa cytoplasm produced by introgressing the NC compatibility (Ncc) gene from T. timopheevii was used to identify random amplified polymorphic DNA (RAPD) markers linked to it. After a survey of 200 random decamer primers, four markers were selected, all of which were completely linked in 64 individuals of a SB8 mapping population. One marker was derived from a single locus, while three others were from interspersed repetitive sequences. Also, the hybrid chromosomes and those of the parental T. durum had identical C-banding patterns. RAPD-PCR analysis of 65 accessions from wild and cultivated tetraploid wheat species showed the exclusive presence of the markers in timopheevii wheat. In conclusion, the chromosomal region flanking Ncc of T. timopheevii is highly conserved in the genome of this group of tetraploid wheats.Key words: nucleus–cytoplasm compatibility, Ncc gene, Aegilops squarrosa, Triticum timopheevii, tetraploid wheat, RAPD marker.

scholarly journals Identification and Physical Localization of Useful Genes and Markers to a Major Gene-Rich Region on Wheat Group1SChromosomes

Genetics ◽  
2001 ◽  
Vol 157 (4) ◽  
pp. 1735-1747 ◽  
Author(s):  
Devinder Sandhu ◽  
Julie A Champoux ◽  
Svetlana N Bondareva ◽  
Kulvinder S Gill
Keyword(s):  
Dna Analysis ◽  
Major Gene ◽  
Rflp Markers ◽  
Rich Region ◽  
Wheat Group ◽  
Marker Loci ◽  
Group 1 Chromosomes ◽  
Gene Rich Region ◽  
Homeologous Group ◽  
Group 1

AbstractThe short arm of Triticeae homeologous group 1 chromosomes is known to contain many agronomically important genes. The objectives of this study were to physically localize gene-containing regions of the group 1 short arm, enrich these regions with markers, and study the distribution of genes and recombination. We focused on the major gene-rich region (“1S0.8 region”) and identified 75 useful genes along with 93 RFLP markers by comparing 35 different maps of Poaceae species. The RFLP markers were tested by gel blot DNA analysis of wheat group 1 nullisomic-tetrasomic lines, ditelosomic lines, and four single-break deletion lines for chromosome arm 1BS. Seventy-three of the 93 markers mapped to group 1 and detected 91 loci on chromosome 1B. Fifty-one of these markers mapped to two major gene-rich regions physically encompassing 14% of the short arm. Forty-one marker loci mapped to the 1S0.8 region and 10 to 1S0.5 region. Two cDNA markers mapped in the centromeric region and the remaining 24 loci were on the long arm. About 82% of short arm recombination was observed in the 1S0.8 region and 17% in the 1S0.5 region. Less than 1% recombination was observed for the remaining 85% of the physical arm length.

scholarly journals Triticum aestivum × Triticum timopheevii introgression lines as a source of pathogen resistance genes

2011 ◽  
Vol 47 (Special Issue) ◽  
pp. S49-S55 ◽  
Author(s):  
I.N. Leonova ◽  
E.B. Budashkina ◽  
N.P. Kalinina ◽  
M.S. Röder ◽  
A. Börner ◽  
...  
Keyword(s):  
Triticum Aestivum ◽  
Microsatellite Markers ◽  
Molecular Mapping ◽  
Tetraploid Wheat ◽  
Leaf Rust Resistance ◽  
Pathogen Resistance ◽  
Introgression Lines ◽  
Phenotypic Variance ◽  
Triticum Timopheevii ◽  
Loose Smut

A collection of introgression lines was obtained from crosses of common wheat (Triticum aestivum L.) cultivars with tetraploid wheat Triticum timopheevii (Zhuk.). Evaluation of resistance to fungal diseases revealed the lines with resistance to leaf and stem rusts, powdery mildew, spot blotch, and loose smut, the most widespread in Siberian region of Russia. Localization of the T. timopheevii genome fragments by means of microsatellite markers determined higher frequency of substitutions and translocations on chromosomes 1А, 2A, 2B, 5A, 5B and 6B. Molecular mapping of the loci determining leaf rust resistance revealed two independent loci on chromosomes 5B and 2A. The major locus on 5BS.5BL-5GL translocated chromosome accounting 64% of the phenotypic variance of the trait was found to be closely linked to microsatellite markers Xgwm814 and Xgwm1257. The other, minor locus, controlling 11% of the trait was mapped next to Xgwm312 on chromosome 2A. Microsatellite markers located near these genes may be used for controlling the transfer of valuable traits in new wheat cultivars.

A family of endosperm globulins encoded by genes located in group 1 chromosomes of wheat and related species

1988 ◽  
Vol 214 (3) ◽  
pp. 541-546 ◽  
Author(s):  
Luis Gomez ◽  
Rosa Sanchez-Monge ◽  
Gabriel Salcedo
Keyword(s):  
Related Species ◽  
Group 1 Chromosomes ◽  
Group 1

scholarly journals Molecular-genetic maps for group 1 chromosomes of Triticeae species and their relation to chromosomes in rice and oat

Genome ◽  
1995 ◽  
Vol 38 (1) ◽  
pp. 45-59 ◽  
Author(s):  
A. E. Van Deynze ◽  
J. Dubcovsky ◽  
K. S. Gill ◽  
J. C. Nelson ◽  
M. E. Sorrells ◽  
...  
Keyword(s):  
Dna Markers ◽  
Molecular Genetic ◽  
Genetic Maps ◽  
Chromosome 1 ◽  
Linkage Maps ◽  
Consensus Map ◽  
Triticeae Species ◽  
Group 1 Chromosomes ◽  
Homoeologous Chromosomes ◽  
Group 1

Group 1 chromosomes of the Triticeae tribe have been studied extensively because many important genes have been assigned to them. In this paper, chromosome 1 linkage maps of Triticum aestivum, T. tauschii, and T. monococcum are compared with existing barley and rye maps to develop a consensus map for Triticeae species and thus facilitate the mapping of agronomic genes in this tribe. The consensus map that was developed consists of 14 agronomically important genes, 17 DNA markers that were derived from known-function clones, and 76 DNA markers derived from anonymous clones. There are 12 inconsistencies in the order of markers among seven wheat, four barley, and two rye maps. A comparison of the Triticeae group 1 chromosome consensus map with linkage maps of homoeologous chromosomes in rice indicates that the linkage maps for the long arm and the proximal portion of the short arm of group 1 chromosomes are conserved among these species. Similarly, gene order is conserved between Triticeae chromosome 1 and its homoeologous chromosome in oat. The location of the centromere in rice and oat chromosomes is estimated from its position in homoeologous group 1 chromosomes of Triticeae.Key words: Triticeae, RFLP, consensus, comparative.

Control of lectins in Triticum aestivum and Aegilops umbellulata by homoeologous group 1 chromosomes

1983 ◽  
Vol 67 (1) ◽  
pp. 53-58 ◽  
Author(s):  
H. M. Stinissen ◽  
W. J. Peumans ◽  
C. N. Law ◽  
P. I. Payne
Keyword(s):  
Triticum Aestivum ◽  
Homoeologous Group ◽  
Aegilops Umbellulata ◽  
Group 1 Chromosomes ◽  
Group 1

scholarly journals Assessment of RAPD Markers to Analyse the Genetic Diversity among Sunflower (Helianthus annuus L.) Genotypes

2018 ◽  
Vol 6 (1) ◽  
pp. 107 ◽  
Author(s):  
Ali Raza ◽  
Haseeb Shaukat ◽  
Qasim Ali ◽  
Madiha Habib
Keyword(s):  
Genetic Diversity ◽  
Genetic Similarity ◽  
Rapd Markers ◽  
Polymorphic Information Content ◽  
Random Amplified Polymorphic Dna ◽  
Future Studies ◽  
Group 2 ◽  
Maximum Similarity ◽  
Sunflower Genome ◽  
Group 1

Genetic diversity estimation among different species is an important tool for genetic improvement to maximize the yield, desirable quality, wider adaptation, pest and insect resistance that ultimately boosting traditional plant breeding methods. The most efficient way of diversity estimation is application of molecular markers. In this study, twenty random amplified polymorphic DNA (RAPD) primers were utilized to estimate the genetic diversity between ten sunflower genotypes. Overall 227 bands were amplified by 20 primers with an average of 11.35 bands per primer. RAPD data showed 86.34% polymorophic bands and 13.65% of monomorophic bands. Genetic similarity was ranged from 50.22% to 87.22%. The lowest similarity (50.22%) was observed between FH-352 and FH-359 and the maximum similarity 87.22% was observed between A-23 and G-46. Polymorphic information content (PIC) values were varying from 0.05 to 0.12 with a mean of 0.09. Cluster analysis based on RAPD results displayed two major distinct groups 1 and 2. Group-2 contains FH-352 which was the most diverse genotype, while group-1 consists of few sub groups with all other genotypes. Ample diversity was found in all the genotypes. Present study reveals novel information about sunflower genome which can be used in future studies for sunflower improvement.

Tetraploid wheat species Triticum timopheevii and Triticum militinae in common wheat improvement

2002 ◽  
Vol 50 (4) ◽  
pp. 463-477 ◽  
Author(s):  
K Järve ◽  
I. Jakobson ◽  
T. Enno
Keyword(s):  
Disease Resistance ◽  
Common Wheat ◽  
Tetraploid Wheat ◽  
Introgressive Hybridization ◽  
Fungal Diseases ◽  
Triticum Timopheevii ◽  
Wheat Species ◽  
Major Genes ◽  
Wheat Improvement ◽  
Unknown Species

Timopheevii wheats are discussed as donors for improving the disease resistance of common wheat. Attention is paid to the comparison of the morphological and chromosomal characteristics of Triticum timopheevii and T. militinae, their crossability with T. aestivum and their response to fungal diseases. The possible origin of T. militinae from an introgressive hybridization between T. timopheevii and an unknown species is discussed. Major genes for resistance to various fungal diseases, transferred to common wheat from T. timopheevii, are listed.

Homoeologous pairing and recombination between the long arms of group 1 chromosomes in wheat × rye hybrids

Genome ◽  
1989 ◽  
Vol 32 (2) ◽  
pp. 293-301 ◽  
Author(s):  
T. Naranjo ◽  
P. Fernández-Rueda ◽  
P. G. Goicoechea ◽  
A. Roca ◽  
R. Giráldez
Keyword(s):  
Banding Pattern ◽  
Homoeologous Pairing ◽  
Parental Type ◽  
C Banding ◽  
Group 1 Chromosomes ◽  
The Relationship ◽  
Double Recombinant ◽  
Group 1 ◽  
Metaphase I

The relationship between homoeologous pairing at metaphase I and recombination at anaphase I between the arms 1AL, 1BL, 1DL, and 1RL was analyzed in ph1b, 5B-deficient, and ph2b wheat × rye hybrids. All four arms could be identified at metaphase I, as well as the arms 1BL and 1RL at anaphase I, by means of C-banding. On the basis of the C-heterochromatin constitution that 1BL and 1RL showed at anaphase I and that association at metaphase I was essentially homoeologous, the following anaphase I chromosome types could be distinguished: parental type, single and double recombinant types between 1BL and 1AL or 1DL, between 1BL and 1RL, and between 1RL and 1AL or 1DL. Recombinant types 1AL – 1DL did not differ from the parental type for the C-banding pattern and was not considered. In the three genotypes, most if not all of 1BL – 1AL, 1BL – 1DL, and 1BL – 1RL metaphase I bonds were chiasmatic. 1RL – 1AL and 1RL – 1DL associations were scarce. Frequencies of one chiasma and two chiasmata for the arm combinations 1BL – 1AL plus 1BL – 1DL, 1BL – 1RL, and 1RL – 1AL plus 1RL – 1DL were estimated. Values decreased in the order ph1b, 5B-deficient, and ph2b hybrids.Key words: C-banding, chiasmata, homoeologues, anaphase I, ph genes.

Molecular genetic identification of Avena chromosomes related to the group 1 chromosomes of the Triticeae

Genome ◽  
1995 ◽  
Vol 38 (1) ◽  
pp. 185-189 ◽  
Author(s):  
E. N. Jellen ◽  
R. L. Phillips ◽  
W. L. Rooney ◽  
H. W. Rines
Keyword(s):  
Molecular Genetic ◽  
Genetic Identification ◽  
Target Sequence ◽  
Homoeologous Group ◽  
Chinese Spring Wheat ◽  
Complete Series ◽  
Group 1 Chromosomes ◽  
Molecular Genetic Identification ◽  
Homoeologous Chromosomes ◽  
Group 1

A collection of 19 wheat (Triticum aestivum) probes, detecting sequences in the seven homoeologous groups of chromosomes, were hybridized to DNA from the 'Kanota' series of oat monosomic lines (Avena byzantina) to investigate their use for identifying groups of homoeologous oat chromosomes. Three probes from homoeologous group 1 of wheat, psr161, psr162, and psr121, mapped among the set of oat chromosomes 1C, 14, and 17. One homoeologous group 6 probe, psr167, mapped to oat chromosomes 1C and 17. Two oat probes that had previously been shown to map to oat chromosomes 1C, 14, and 17 were then hybridized to DNA from the 'Chinese Spring' wheat ditelosomics. They localized to homoeologous group 1 wheat chromosomes, one to the short arm and one to the long arm. These results reveal that in hexaploid oat there is a group of three chromosomes that correspond at least in part to homoeologous group 1 of wheat. The remaining wheat probes identifying other wheat homoeologous sets did not detect a complete series of homoeologous chromosomes in oat. This was presumably due to the incomplete status of the 'Kanota' monosomic series, chromosomal rearrangement in Avena, weak hybridization signals owing to low probe-target sequence homology, and (or) detection of only two hybridization bands by the wheat probe.Key words: oat, RFLPs, aneuploids, wheat, homoeologous groups.

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