scholarly journals Fungi associated with hibernating bats in New Brunswick caves: the genus Leuconeurospora

Botany ◽  
2016 ◽  
Vol 94 (12) ◽  
pp. 1171-1181 ◽  
Author(s):  
David Malloch ◽  
Lynne Sigler ◽  
Sarah Hambleton ◽  
Karen J. Vanderwolf ◽  
Connie Fe C. Gibas ◽  
...  

Two species of Leuconeurospora, Leuconeurospora capsici (J.F.H. Beyma) Malloch, Sigler & Hambleton and Leuconeurospora polypaeciloides Malloch, Sigler & Hambleton (Ascomycota: Pseudeurotiaceae), are reported from the fur and skin of hibernating bats and from other substrata in caves in New Brunswick, Canada. Separate analyses using ITS, RPB1, and RPB2 DNA sequence data are in agreement and show these two species and the type species, Leuconeurospora pulcherrima (G. Winter) Malloch & Cain, form discrete clades within a distinct Leuconeurospora clade. The three species are distinguishable morphologically by their anamorphs, having dark conidia in L. capsici, hyaline conidia in L. polypaeciloides, and no conidia in L. pulcherrima. Ascomata and ascospores are produced in L. pulcherrima and in mated isolates of L. polypaeciloides, but have not been observed in L. capsici. Leuconeurospora species are psychrotolerant, with faster growth and heavier conidial development at 7 °C than at 22 °C. Of 151 bats sampled from 10 caves, 51 yielded isolates of L. polypaeciloides and 15 yielded L. capsici. The results were not uniform: neither species was isolated from bats in three caves, while three caves yielded isolates of both species and two yielded L. polypaeciloides only. These species were also isolated from cave walls and arthropods in the cave.

2020 ◽  
Vol 6 (1) ◽  
pp. 1-24
Author(s):  
M. Hernández-Restrepo ◽  
A. Giraldo ◽  
R. van Doorn ◽  
M.J. Wingfield ◽  
J.Z. Groenewald ◽  
...  

The Genera of Fungi series, of which this is the sixth contribution, links type species of fungal genera to their morphology and DNA sequence data. Five genera of microfungi are treated in this study, with new species introduced in Arthrographis, Melnikomyces, and Verruconis. The genus Thysanorea is emended and two new species and nine combinations are proposed. Kramasamuha sibika, the type species of the genus, is provided with DNA sequence data for first time and shown to be a member of Helminthosphaeriaceae (Sordariomycetes). Aureoconidiella is introduced as a new genus representing a new lineage in the Dothideomycetes.


Zootaxa ◽  
2012 ◽  
Vol 3350 (1) ◽  
pp. 1 ◽  
Author(s):  
BARRY J. RICHARDSON ◽  
NICOLE L. GUNTER

The genus Servaea Simon 1887 is revised and redefined. Descriptions and identification keys are provided to the following sixspecies, of which three are described as new: Servaea incana (Karsch 1878), Servaea narraweena n. sp., Servaea melaina n.sp., Servaea spinibarbis Simon 1909, Servaea villosa (Keyserling 1881) and Servaea zabkai n. sp. The type species of thegenus, Servaea vestita (L. Koch 1879), is proposed here to be a junior synonym of Servaea incana. In addition to the diagnosesand descriptions, distributional and nucleotide sequence information are provided. DNA sequence data for the segment of COIused in other salticid studies was obtained for the five species for which suitable material was available. Intraspecific variationin S. villosa and S. incana were studied in more detail. Within-species divergence was S. melaina and S spinibarbis, had adjacent predicted distributions, one coastal on sandy soils and one inland on other soil types.


2020 ◽  
Vol 5 (1) ◽  
pp. 77-98 ◽  
Author(s):  
P.W. Crous ◽  
R.K. Schumacher ◽  
A.R. Wood ◽  
J.Z. Groenewald

The present paper represents the fifth contribution in the Genera of Fungi series, linking type species of fungal genera to their morphology and DNA sequence data. This paper focuses on 11 genera of microfungi, for seven of which the type species are neo- or epitypified here: Arthrinium (Arthrinium caricicola; Apiosporaceae, Xylariales, Sordariomycetes), Ceratosphaeria (Ceratosphaeria lampadophora; Magnaporthaceae, Magnaporthales, Sordariomycetes), Dimerosporiopsis (Dimerosporiopsis engleriana; Venturiaceae, Venturiales, Dothideomycetes), Hormodochis (Hormodochis melanochlora; Stictidaceae, Ostropales, Ostropomycetidae, OSLEUM clade, Lecanoromycetes), Lecanostictopsis (Lecanostictopsis kamatii; Mycosphaerellaceae, Capnodiales, Dothideomycetes), Lembosina (Lembosina aulographoides; Lembosinaceae fam. nov., Lembosinales ord. nov., Dothideomycetes), Neomelanconium (Neomelanconium gelatosporum; Cenangiaceae, Helotiales, Leotiomycetes), Phragmotrichum (Phragmotrichum chailletii; Melanommataceae, Pleosporales, Pleosporomycetidae, Dothideomycetes), Pseudomelanconium gen. nov. (Pseudomelanconium spartii; incertae sedis, Pezizomycotina), Rutola (Rutola graminis; Torulaceae, Pleosporales, Pleosporomycetidae, Dothideomycetes), and Trullula (Trullula oreoselini; incertae sedis, Pezizomycotina).


2020 ◽  
Vol 78 ◽  
pp. 33-40
Author(s):  
Hui Geng ◽  
Cheng-De Li ◽  
Jason Mottern ◽  
Andrew Polaszek

Idiococcobius Hayat, syn. nov., is synonymised with Coccobius Ratzeburg, based on morphological and molecular data from a new species of Coccobius from Malaysian Borneo. The new species is sufficiently similar morphologically to the type species of Idiococcobius to place it unambiguously within that genus, but molecular data from the new species, and a reassessment of the morphology of Idiococcobius, indicate synonymy of the two genera. Idiococcobius encarsoides Hayat is therefore transferred to Coccobius; resulting in the new combination: Coccobius encarsoides (Hayat), comb. nov.Coccobius islandicus Geng & Polaszek, sp. nov, is described from morphology and DNA sequence data.


Author(s):  
Alain Pauly ◽  
Jason Gibbs ◽  
Michael Kuhlmann

Capalictus, a new subgenus of Lasioglossum Curtis, 1833 (Hymenoptera, Apoidea, Halic-tidae), endemic to the South African Cape Province, is described. The type species is Halictus mosselinus Cockerell, 1945. Evylaeus (Sellalictus) fynbosensis (Pauly et al., 2008) is a new junior synonym of L. (C.) mosselinum. Three new species are described: Lasioglossum (Capalictus) hantamense sp. nov., L. (C.) tigrinum sp. nov. and L. (C.) timmermanni sp. nov. DNA sequence data from three nuclear genes support morphologically-determined species limits. Capalictus is a basal clade of the Hemihalictus series of Lasioglossum.


2019 ◽  
Vol 189 (4) ◽  
pp. 1438-1463
Author(s):  
Qingquan Xue ◽  
Yalin Zhang

Abstract The phylogeny of the Oriental leafhopper genus Amritodus is reconstructed, for the first time, based on 47 discrete morphological characters and DNA sequence data from one nuclear and two mitochondrial genes. The phylogenetic results show that Amritodus is not monophyletic, and its concept is narrowed here to include four species: Amritodus atkinsoni, Amritodus brevis, Amritodus brevistylus and Amritodus saeedi. The phylogenetic results support establishment of a new genus, Paramritodus gen. nov., with three new species,Paramritodus triangulus sp. nov. (type species), Paramritodus introflexus sp. nov., Paramritodus spatiosus sp. nov. and three species previously included in Amritodus: Paramritodus pistacious comb. nov., Paramritodus flavocapitatus comb. nov. and Paramritodus podocarpus comb. nov. In addition, Amritodus flavoscutatus is transferred from Amritodus to Hyalinocerus as Hyalinocerus flavoscutatus comb. nov. Keys to species of Amritodus and Paramritodus are provided.


ZooKeys ◽  
2021 ◽  
Vol 1044 ◽  
pp. 41-152
Author(s):  
David H. Kavanaugh ◽  
David R. Maddison ◽  
W. Brian Simison ◽  
Sean D. Schoville ◽  
Joachim Schmidt ◽  
...  

The phylogeny of the carabid beetle supertribe Nebriitae is inferred from analyses of DNA sequence data from eight gene fragments including one nuclear ribosomal gene (28S), four nuclear-protein coding genes (CAD, topoisomerase 1, PEPCK, and wingless), and three mitochondrial gene fragments (16S + tRNA-Leu + ND1, COI (“barcode” region) and COI (“Pat/Jer” region)). Our taxon sample included 264 exemplars representing 241 species and subspecies (25% of the known nebriite fauna), 39 of 41 currently accepted genera and subgenera (all except Notiokasis and Archileistobrius), and eight outgroup taxa. Separate maximum likelihood (ML) analyses of individual genes, combined ML analyses of nuclear, nuclear protein-coding, and mitochondrial genes, and combined ML and Bayesian analyses of the eight-gene-fragment matrix resulted in a well-resolved phylogeny of the supertribe, with most nodes in the tree strongly supported. Within Nebriitae, 167 internal nodes of the tree (out of the maximum possible 255) are supported by maximum-likelihood bootstrap values of 90% or more. The tribes Notiophilini, Opisthiini, Pelophilini, and Nebriini are well supported as monophyletic but relationships among these are not well resolved. Nippononebria is a distinct genus more closely related to Leistus than Nebria. Archastes, Oreonebria, Spelaeonebria, and Eurynebria, previously treated as distinct genera by some authors, are all nested within a monophyletic genus Nebria. Within Nebria, four major clades are recognized: (1) the Oreonebria Series, including eight subgenera arrayed in two subgeneric complexes (the Eonebria and Oreonebria Complexes); (2) the Nebriola Series, including only subgenus Nebriola; (3) the Nebria Series, including ten subgenera arrayed in two subgeneric complexes, the Boreonebria and Nebria Complexes, with the latter further subdivided into three subgeneric subcomplexes (the Nebria, Epinebriola, and Eunebria Subcomplexes)); and (4) the Catonebria Series, including seven subgenera arrayed in two subgeneric complexes (the Reductonebria and Catonebria Complexes). A strong concordance of biogeography with the inferred phylogeny is noted and some evident vicariance patterns are highlighted. A revised classification, mainly within the Nebriini, is proposed to reflect the inferred phylogeny. Three genus-group taxa (Nippononebria, Vancouveria and Archastes) are given revised status and seven are recognized as new synonymies (Nebriorites Jeannel, 1941 and Marggia Huber, 2014 = Oreonebria Daniel, 1903; Pseudonebriola Ledoux & Roux, 1989 = Boreonebria Jeannel, 1937; Patrobonebria Bänninger, 1923, Paranebria Jeannel, 1937 and Barbonebriola Huber & Schmidt, 2017 = Epinebriola Daniel & Daniel, 1904; and Asionebria Shilenkov, 1982 = Psilonebria Andrewes, 1923). Six new subgenera are proposed and described for newly recognized clades: Parepinebriola Kavanaugh subgen. nov. (type species: Nebria delicata Huber & Schmidt, 2017), Insulanebria Kavanaugh subgen. nov. (type species: Nebria carbonaria Eschscholtz, 1829), Erwinebria Kavanaugh subgen. nov. (type species Nebria sahlbergii Fischer von Waldheim, 1828), Nivalonebria Kavanaugh subgen. nov. (type species: Nebria paradisi Darlington, 1931), Neaptenonebria Kavanaugh subgen. nov. (type species: Nebria ovipennis LeConte, 1878), and Palaptenonebria Kavanaugh subgen. nov. (type species: Nebria mellyi Gebler, 1847). Future efforts to better understand relationships within the supertribe should aim to expand the taxon sampling of DNA sequence data, particularly within subgenera Leistus and Evanoleistus of genus Leistus and the Nebria Complex of genus Nebria.


2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Heleen Plaisier ◽  
Thomas R. Meagher ◽  
Daniel Barker

Abstract Objective Visualisation methods, primarily color-coded representation of sequence data, have been a predominant means of representation of DNA data. Algorithmic conversion of DNA sequence data to sound—sonification—represents an alternative means of representation that uses a different range of human sensory perception. We propose that sonification has value for public engagement with DNA sequence information because it has potential to be entertaining as well as informative. We conduct preliminary work to explore the potential of DNA sequence sonification in public engagement with bioinformatics. We apply a simple sonification technique for DNA, in which each DNA base is represented by a specific note. Additionally, a beat may be added to indicate codon boundaries or for musical effect. We report a brief analysis from public engagement events we conducted that featured this method of sonification. Results We report on use of DNA sequence sonification at two public events. Sonification has potential in public engagement with bioinformatics, both as a means of data representation and as a means to attract audience to a drop-in stand. We also discuss further directions for research on integration of sonification into bioinformatics public engagement and education.


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