Analyzing growth in cell cultures. II. Effect of initial cell mass on growth

1986 ◽  
Vol 64 (1) ◽  
pp. 238-241 ◽  
Author(s):  
Susan R. Singer ◽  
Carl N. McDaniel

Numerous factors must be considered when analyzing growth in a cultured cell system. One extremely critical factor is the initial cell mass. The effect of initial mass (10 to 400 mg) on growth rate was assessed for cell lines tolerant and susceptible to the herbicides 3-amino-1,2,4-triazole (amitrole) and N-(phosphonomethyl)glycine (glyphosate). For a given cell line, the relationship between initial mass and growth rate was comparable in the presence and absence of the growth inhibitors. However, among cell lines the response varied. For one amitrole- and glyphosate-tolerant cell line, increased initial callus mass resulted in an increased relative rate of growth. However, the opposite effect was observed for another cell line which was also tolerant to both herbicides. For a third cell line which was herbicide sensitive no initial mass effect was observed. A fourth cell line (amitrole tolerant – glyphosate sensitive) also showed no initial mass effect except for the very small 10-mg calluses, which had significantly lower growth rates. The observed effect of initial mass was dependent on the method of calculating growth rates.

1999 ◽  
Vol 112 (6) ◽  
pp. 939-946 ◽  
Author(s):  
C.R. Carlson ◽  
B. Grallert ◽  
T. Stokke ◽  
E. Boye

Cells of Schizosaccharomyces pombe were grown in minimal medium with different nitrogen sources under steady-state conditions, with doubling times ranging from 2.5 to 14 hours. Flow cytometry and fluorescence microscopy confirmed earlier findings that at rapid growth rates, the G1 phase was short and cell separation occurred at the end of S phase. For some nitrogen sources, the growth rate was greatly decreased, the G1 phase occupied 30–50% of the cell cycle, and cell separation occurred in early G1. In contrast, other nitrogen sources supported low growth rates without any significant increase in G1 duration. The method described allows manipulation of the length of G1 and the relative cell cycle position of S phase in wild-type cells. Cell mass was measured by flow cytometry as scattered light and as protein-associated fluorescence. The extensions of G1 were not related to cell mass at entry into S phase. Our data do not support the hypothesis that the cells must reach a certain fixed, critical mass before entry into S. We suggest that cell mass at the G1/S transition point is variable and determined by a set of molecular parameters. In the present experiments, these parameters were influenced by the different nitrogen sources in a way that was independent of the actual growth rate.


Blood ◽  
2008 ◽  
Vol 112 (11) ◽  
pp. 1707-1707
Author(s):  
Bonnie K Arendt ◽  
Xiaosheng Wu ◽  
Philip R Greipp ◽  
S. Vincent Rajkumar ◽  
Robert Kyle ◽  
...  

Abstract Malignant plasma cell (PC) disorders are clonal diseases based on their immunoglobulin variable region sequence signature. However, intratumor phenotypic, genetic, and morphologic heterogeneity is often observed, fueling the notion that a subpopulation of the malignant PC clone may have extensive self-renewal properties whereas others may not. Little information exists regarding the relationship between these putative tumor subpopulations that is instrumental to our understanding of the growth, progression and therapeutic targeting of PC disorders. We recently described establishment of two novel cell lines from one patient initially diagnosed with primary amyloidosis (ALMC-1), who eventually progressed to a combination of AL and symptomatic multiple myeloma (MM; ALMC-2). Although both cell lines are clonally related, they exhibit a number of intriguing differences, including a marked variability in their makeup of mononuclear (MoN) and multinuclear cells (2 − >10 nuclei; MuN). The ALMC-1 cell line consistently displays a much larger fraction of MuN cells (~50%) than the ALMC-2 cell line (~20%). By contrast, the growth rate of the ALMC-2 cells is significantly higher than ALMC-1 cells suggesting an inverse relationship between growth rate and fraction of MuN cells. It has been demonstrated that MoN plasmablastic morphology is a predictor of poor survival in MM, however the clinical significance of MuN PCs, which are frequently observed in bone marrow biopsies, has yet to be determined. We therefore used the ALMC-1 and ALMC-2 cell lines to begin to test the hypothesis that the MoN fraction in both cell lines contains cells with extensive self-renewal properties whereas the MuN cells are no longer capable of cell division. The central questions become by what mechanism are MuN PCs generated and how are MoN PCs maintained? Two hypotheses that can explain the dual persistence of both types of cells are: random cell fusion; regulated or sporadic cell division of MoN cells into 2 daughter cells, one of which divides normally and the other one fails to undergo cytokinesis. To address the first possibility, each cell line was transfected with GFP or YFP. Single positive (GFP or YFP) cells were then mixed and cocultured for assessing the frequency of dual positive cells by flow cytometry at various time points. However, studies to date suggest this mechanism does not occur. To begin to address the second possibility and determine whether extrinsic factors, e.g., cytokines, may regulate the rate of generation of MuN PCs, we cultured both cell lines +/− IL-6 and IGF-I and assessed numbers of MoN and MuN PCs. Initial analyses suggest that IL-6, but not IGF-I, increases the proportion of MoN PCs in both cell lines. To address the hypothesis that MuN PCs are no longer capable of growth, cells were labeled with bromodeoxyuridine (BrDU) to assess the capability of MuN cells to synthesize DNA. We observed that MuN PCs incorporating BrDU did so uniformly in each nucleus present in the cell. We then assessed the ability of cell division of MuN cells by quantitating normal vs abnormal metaphases in both cell lines and observed that >90% of metaphases were present in MoN PCs, suggesting that MoN PCs largely give rise to MuN PCs and the latter are likely compromised in cytokinesis. As centrosomes play a critical role in regulating cell division and centrosome abnormalities have been noted in MM by others, we next used gamma-tubulin immunofluorescence to detect centrosomes. MoN PCs exhibited uniformly normal centrosome numbers and positioning while MuN PCs showed clear centrosomal abnormalities including accumulation of centrosomes, centrosome clustering, and multiple directional centrosome polarization, suggesting a mechanism by which the MuN cells may be generated. In summary, our data suggest that MuN PCs lack growth potential and that intrinsic and/or extrinsic factors may drive accumulation of these cells. These observations support the possibility that patients with a larger proportion of MuN PCs may have differences in clinical outcome from those patients with largely MoN PCs. To test this, we have begun hematopathological analysis of a large series of patients diagnosed with various plasma cell disorders. Knowledge of the signals that regulate the balance between MoN and MuN cells could lend itself toward identification of therapeutic modalities that may maximize differentiation of tumor cells into end-stage cells.


2001 ◽  
Vol 67 (6) ◽  
pp. 2526-2530 ◽  
Author(s):  
Bodun A. Rabiu ◽  
Andrew J. Jay ◽  
Glenn R. Gibson ◽  
Robert A. Rastall

ABSTRACT β-Galactosidase enzymes were extracted from pure cultures ofBifidobacterium angulatum, B. bifidum BB-12, B. adolescentis ANB-7, B. infantis DSM-20088, andB. pseudolongum DSM-20099 and used in glycosyl transfer reactions to synthesize oligosaccharides from lactose. At a lactose concentration of 30% (wt/wt) oligosaccharide yields of 24.7 to 47.6% occurred within 7 h. Examination of the products by thin-layer chromatography and methylation analysis revealed distinct product derived spectra from each enzyme. These were found to be different to that of Oligomate 55, a commercial prebiotic galacto-oligosaccharide. Fermentation testing of the oligosaccharides showed an increase in growth rate, compared to Oligomate 55, with products derived fromB. angulatum, B. bifidum, B. infantis, and B. pseudolongum. However B. adolescentis had a lower growth rates on its oligosaccharide compared with Oligomate 55. Mixed culture testing of the B. bifidum BS-4 oligosaccharide showed that the overall prebiotic effect was equivalent to that of Oligomate 55.


Cancers ◽  
2021 ◽  
Vol 14 (1) ◽  
pp. 144
Author(s):  
Patrícia Neuperger ◽  
József Á. Balog ◽  
László Tiszlavicz ◽  
József Furák ◽  
Nikolett Gémes ◽  
...  

Intratumoral heterogeneity (ITH) is responsible for the majority of difficulties encountered in the treatment of lung-cancer patients. Therefore, the heterogeneity of NSCLC cell lines and primary lung adenocarcinoma was investigated by single-cell mass cytometry (CyTOF). First, we studied the single-cell heterogeneity of frequent NSCLC adenocarcinoma models, such as A549, H1975, and H1650. The intra- and inter-cell-line single-cell heterogeneity is represented in the expression patterns of 13 markers—namely GLUT1, MCT4, CA9, TMEM45A, CD66, CD274 (PD-L1), CD24, CD326 (EpCAM), pan-keratin, TRA-1-60, galectin-3, galectin-1, and EGFR. The qRT-PCR and CyTOF analyses revealed that a hypoxic microenvironment and altered metabolism may influence cell-line heterogeneity. Additionally, human primary lung adenocarcinoma and non-involved healthy lung tissue biopsies were homogenized to prepare a single-cell suspension for CyTOF analysis. The CyTOF showed the ITH of human primary lung adenocarcinoma for 14 markers; particularly, the higher expressions of GLUT1, MCT4, CA9, TMEM45A, and CD66 were associated with the lung-tumor tissue. Our single-cell results are the first to demonstrate TMEM45A expression in human lung adenocarcinoma, which was verified by immunohistochemistry.


Blood ◽  
2014 ◽  
Vol 124 (21) ◽  
pp. 2383-2383
Author(s):  
Francois Mercier ◽  
Jiantao Shi ◽  
David Sykes ◽  
Youmna Sami Kfoury ◽  
Rushdia Z. Yusuf ◽  
...  

Abstract Rationale: Human malignancies are often composed of multiple, related clones that arise through a process of branching Darwinian evolution. In acute myeloid leukemia (AML), high-throughput DNA sequencing identifies clonal heterogeneity at the mutational level, but the downstream molecular pathways driving clonal fitness, and their impact on response to therapy are still poorly understood. We report on the development of a novel experimental tool that allows prospective tracking of clonal evolution at the functional level. Using a combination of murine models of AML and fluorescent protein labeling, we can measure clonal evolution in real time, serially isolate live clones competing in the same environment for phenotypic characterization, and correlate these findings with mutational, epigenetic and gene expression profiling. Methods: A clonal pre-leukemic cell line, derived from a murine granulocyte-macrophage progenitor infected with a retrovirus enforcing expression of the MLL-AF9 fusion protein, was labeled with a pool of lentiviruses driving the expression of multiple fluorescent proteins (FPs). From this cell line, fluorescently distinguishable sub-clones were selected and expanded. This pool of clones was transplanted in multiple recipients. Disease competition and evolution was tracked prospectively in primary recipients through repeated sampling of blood and bone marrow. Secondary leukemic cell lines were established from individual clones harvested at serial time points during growth in vivo. In order to study the cell-intrinsic characteristics acquired following exposure to the bone marrow microenvironment, these secondary cell lines were transplanted into additional recipients to measure engraftment potential, growth rate, cell cycle and apoptosis, gene expression profile and acquisition of secondary mutations. Results: By transplanting in competition multiple pre-leukemic clones in a cohort of primary recipients, we observed emergence of dominant clones during the development of AML. By sampling “winner” clones at different time points, we could observe the gradual acquisition of a cell-intrinsic growth advantage that was preserved in secondary transplantation, whereas control “loser” clones grew at a significantly lower rate. Functional characterization of the winner clones demonstrated a higher engraftment rate in vivo, whereas the self-renewal potential and growth rate in vitro was similar among winner and loser clones. By comparing the gene expression profile of leukemic stem cells isolated from various clones, we observed that the most aggressive clones share a common signature characterized by activation of multiple metabolic pathways, such as steroid biosynthesis and response to oxidative stress. Since these pathways are not activated in the less aggressive clones, we hypothesize that secondary genetic events that promote growth spontaneously occured in vivo. Functional validation of these pathways is underway and, in parallel, constitutes the basis of ongoing pooled genetic perturbation screens to identify novel therapeutic targets that impede malignant cell growth. Disclosures No relevant conflicts of interest to declare.


2006 ◽  
Vol 18 (2) ◽  
pp. 210 ◽  
Author(s):  
M. A. Serrano ◽  
M. C. Gómez ◽  
M. Lopez ◽  
C. L. Dumas ◽  
K. E. Smith ◽  
...  

Interspecific nuclear transfer has been successfully demonstrated in nondomestic cats (Gomez et al. 2004 Cloning Stem Cells 6, 247); however, the efficiency remains low and may be attributable to nuclear reprogramming errors. Embryonic stem cells (ESC) may complete nuclear reprogramming more efficiently than somatic cells and, therefore, are potentially useful for increasing cloning success (Jaenisch et al. 2002 Cloning Stem Cells 4, 389). The objectives of this study were to: (1) compare efficiency of immunosurgery vs. mechanical separation for isolating the inner cell mass (ICM) of in vitro-derived cat blastocysts; and (2) determine the influence of mouse (MEF: CF-1) and cat (CEF) embryonic fibroblast feeder layers on ICM attachment and growth of ES-like cells. After ICMs were isolated from in vitro-derived blastocysts (n = 142) by immunosurgery or mechanically, they were plated either on mitotically inactivated CEF (40 �L/mL Mitomycin-C; 5 h) or MEF (30 �L/mL Mitomycin-C; 2.5 h). Cells were cultured in DMEM-F12, 1 mM L-Glutamine, 0.1 mM 2-mercaptoethanol, 1.25% nonessential amino acids, 15% knock-out replacement serum, 5% fetal bovine serum, 40 ng/mL leukemia inhibitory factor, 5 ng/mL basic fibroblast growth factor, 100 IU penicillin, 100 �g/mL streptomycin, and 25 �L/mL amphotericin-B in a humidified atmosphere of 5% CO2 in air at 38�C. Our results indicated that ICM isolation and attachment were not affected by either the method of isolation (immunosurgery: 75.8 � 6.9% vs. mechanical: 89.5 � 6.4%) or the feeders (MEF: 74.6 � 6.7% vs. CEF: 90.7 � 6.6%). However, the incidence of ES-like cell colony formation was significantly affected by the feeder layer (CEF: 55.4 � 7.2% vs. MEF: 12.7 � 7.2%; P < 0.001). A total of 32 ES-like cell lines were derived on CEF (n = 26) and MEF (n = 6), of which 50% were alkaline phosphatase (AP)-positive. One ES-like cell line derived on MEF spontaneously differentiated into myocardiocytes after 14 days in culture. Three ES-like cell lines derived on CEF were immunostained for ESC-markers Oct-4, SSEA-1, and SSEA-4, and for AP. Positive results for all markers were observed in a few colonies of each line, with colonies from one cell line appearing on Day 23 and remaining in culture for 102 days (12 passages). Colonies from the other two cell lines appeared on Day 17 and remained in culture for 78 days (9 passages). Colonies derived on MEF appeared on average at 17.9 days and remained in culture an additional 15 to 61 days without further characterization. The present results describe the first isolation of cat ES-like cells. We have demonstrated an important species-specific relationship between feeder layers and the derivation of cat ESCs. Further studies are in progress to improve culture conditions for the derivation and expansion of stable cat ESC lines.


2021 ◽  
Author(s):  
Jacobo Varela Rodríguez ◽  
Juan Huang ◽  
Donald A Spong ◽  
Jiale Chen ◽  
Vincent Chan ◽  
...  

Abstract The aim of this study is to analyze the stability of Alfven Eigenmodes (AE) in the China Fusion Engineering Test Reactor (CFETR) plasma for steady state operations. The analysis is done using the gyro-fluid code FAR3d including the effect of the acoustic modes, EP Finite Larmor radius damping effects and multiple energetic particle populations. Two high poloidal β scenarios are studied with respect to the location of the internal transport barrier (ITB) at r/a ≈ 0.45 (case A) and r/a ≈ 0.6 (case B). Both operation scenarios show a narrow TAE gap between the inner-middle plasma region and a wide EAE gap all along the plasma radius. The AE stability of CFETR plasmas improves if the ITB is located inwards, case A, showing AEs with lower growth rates with respect to the case B. The AEs growth rate is smaller in the case A because the modes are located in the inner-middle plasma region where the stabilizing effect of the magnetic shear is stronger with respect to the case B. Multiple EP populations effects (NBI driven EP + alpha articles) are negligible for the case A, although the simulations for the case B show a stabilizing effect of the NBI EP on the n=1 BAE caused by alpha particles during the thermalization process. If the FLR damping effects are included in the simulations, the growth rate of the EAE/NAE decreases up to 70 %, particularly for n > 3 toroidal families. Low n AEs (n<6) show the largest growth rates. On the other hand, high n modes (n=6 to 15) are triggered in the frequency range of the NAE, strongly damped by the FLR effects.


1999 ◽  
Vol 68 (4) ◽  
pp. 567-575 ◽  
Author(s):  
S. D. Johnston ◽  
R. W. J. Steen ◽  
D. J. Kilpatrick ◽  
D. E. Lowe ◽  
D. M. B. Chestnutt

AbstractA comparison was made over 2 years of sires of Suffolk and Dutch Texel breeds and ewes of Greyface (Border Leicester × Scottish Blackface), Suffolk Cheviot and Dutch Texel breeds in terms of food intake, prolificacy and lamb growth rates under a grass-based system of production. Suffolk Cheviot ewes consumed significantly more silage dry matter than the Greyface ewes in both years of the study. There was no overall difference between Greyface and Suffolk Cheviot ewes in terms of prolificacy. However lambs from Suffolk Cheviot ewes had a higher growth rate than lambs from Greyface ewes from birth to weaning in year 1 (P < 0·01). In the comparison of the three ewe breeds sired by Dutch Texel rams in year 2, Dutch Texel ewes produced a similar number of lambs to the other genotypes but had a higher incidence of difficult lambings, higher lamb mortality and consequently a lower number of lambs weaned. Purebred Dutch Texel male lambs had lower growth rates than crossbred Dutch Texel lambs (143 compared with 158 glday for lambs from Greyface ewes and 166 (s.e. 13.4) glday for lambs from Suffolk Cheviot ewes in year 1 and 183 compared with 251 and 248 respectively (s.e. 10.9) glday in year 2). Lambs sired by Suffolk rams had higher growth rates than those sired by Dutch Texel rams (252 compared with 224 (s.e. 5.4) glday) in year 2.


1996 ◽  
Vol 16 (1) ◽  
pp. 53-65 ◽  
Author(s):  
C Strahl ◽  
E H Blackburn

The ribonucleoprotein telomerase, a specialized cellular reverse transcriptase, synthesizes one strand of the telomeric DNA of eukaryotes. We analyzed telomere maintenance in two immortalized human cell lines: the B-cell line JY616 and the T-cell line Jurkat E6-1, and determined whether known inhibitors of retroviral reverse transcriptases could perturb telomere lengths and growth rates of these cells in culture. Dideoxyguanosine (ddG) caused reproducible, progressive telomere shortening over several weeks of passaging, after which the telomeres stabilized and remained short. However, the prolonged passaging in ddG caused no observable effects on cell population doubling rates or morphology. Azidothymidine (AZT) caused progressive telomere shortening in some but not all T- and B-cell cultures. Telomerase activity was present in both cell lines and was inhibited in vitro by ddGTP and AZT triphosphate. Prolonged passaging in arabinofuranyl-guanosine, dideoxyinosine (ddI), dideoxyadenosine (ddA), didehydrothymidine (d4T), or phosphonoformic acid (foscarnet) did not cause reproducible telomere shortening or decreased cell growth rates or viabilities. Combining AZT, foscarnet, and/or arabinofuranyl-guanosine with ddG did not significantly augment the effects of ddG alone. Strikingly, with or without inhibitors, telomere lengths were often highly unstable in both cell lines and varied between parallel cell cultures. We propose that telomere lengths in these T- and B-cell lines are determined by both telomerase and telomerase-independent mechanisms.


Author(s):  
Tong-Pu Li ◽  
Si-Si Zha ◽  
Chun-Ying Zhou ◽  
Xue Xia ◽  
Ary A. Hoffmann ◽  
...  

Wolbachia endosymbionts can induce multiple reproductive manipulations in their hosts, with cytoplasmic incompatibility (CI) being one of the most common manipulations. The important agricultural pests, white-backed planthopper ( Sogatella furcifera ) and brown planthopper ( Nilaparvata lugens ), are usually infected with CI-inducing Wolbachia w Fur and non-CI-inducing Wolbachia w Lug, respectively. The biological effects of these infections when present in a host cell are unknown. Here, we introduced the two Wolbachia strains into an Aedes albopictus cell line to stably establish a w Fur-infected cell line (WFI) and a w Lug-infected cell line (WLI). In a mixed culture, WFI cells were completely replaced by WLI cells, pointing to a stronger competitiveness of the WLI cell line. We found that infection by both Wolbachia strains reduced cell growth rates, but WLI had a faster cell growth rate than WFI, and this difference in cell growth rate combined with possible Wolbachia differences in diffusivity may have affected cell competitiveness. By examining gene expression and metabolites in the two lines, we found that some genes and key metabolites responded to differences in cell competitiveness. These results point to potential mechanisms that could contribute to the relative performance of hosts infected by these strains and also highlight the substantial impact of a non-CI Wolbachia on metabolism, which may in turn influence fitness of its native host. IMPORTANCE Wolbachia transinfection in insects can be used to suppress pests and block virus transmission. We stably introduced two Wolbachia strains from rice planthoppers into cell lines of an important arbovirus mosquito vector, Aedes albopictus . The competitiveness of host cells from the lines infected by the two Wolbachia strains was different, as were metabolic responses of the cell lines. These results suggest potential metabolic effects of Wolbachia on native hosts which could be exploited when they are transinfected into novel hosts for pest control.


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