scholarly journals Chain formation can enhance the vertical migration of phytoplankton through turbulence

2019 ◽  
Vol 5 (10) ◽  
pp. eaaw7879 ◽  
Author(s):  
Salvatore Lovecchio ◽  
Eric Climent ◽  
Roman Stocker ◽  
William M. Durham
Keyword(s):  
Cell Division ◽  
Water Column ◽  
Surface Waters ◽  
Vertical Migration ◽  
Numerical Models ◽  
Single Cells ◽  
Physical Processes ◽  
Chain Formation ◽  
Swimming Direction ◽  
Turbulent Water

Many species of motile phytoplankton can actively form long multicellular chains by remaining attached to one another after cell division. While chains swim more rapidly than single cells of the same species, chain formation also markedly reduces phytoplankton’s ability to maintain their bearing. This suggests that turbulence, which acts to randomize swimming direction, could sharply attenuate a chain’s ability to migrate between well-lit surface waters during the day and deeper nutrient-rich waters at night. Here, we use numerical models to investigate how chain formation affects the migration of phytoplankton through a turbulent water column. Unexpectedly, we find that the elongated shape of chains helps them travel through weak to moderate turbulence much more effectively than single cells, and isolate the physical processes that confer chains this ability. Our findings provide a new mechanistic understanding of how turbulence can select for phytoplankton with elongated morphologies and may help explain why turbulence triggers chain formation.

ABOUT SOME PECULIARITIES OF THE PHYSIOLOGICAL HETEROGENEITY OF THE POPULATION OF SCENEDESMUS QUADRICAUDA (TURP.) BREB. IN THE PRESENCE OF LOW CONCENTRATIONS OF METALS

2018 ◽  
pp. 34-43
Author(s):  
V. I. Ipatova ◽  
A. G. Dmitrieva ◽  
О. F. Filenko ◽  
T. V. Drozdenko
Keyword(s):  
Cell Division ◽  
Toxic Effect ◽  
Copper Chloride ◽  
Single Cells ◽  
Physiological State ◽  
Scenedesmus Quadricauda ◽  
Physiological Status ◽  
Lag Phase ◽  
Protective Mechanism ◽  
Low Concentrations

The structure of the laboratory population of green microalgae Scenedesmus quadricauda (Turp.) Breb (=Desmodesmus communis E. Hegew.) was studied at different stages of its growth (lag-phase, log-phase and stationary phase) at low concentrations of copper chloride and silver nitrate by the method microculture, allowing to monitor the state and development of single cells having different physiological status. The response of the culture of S. quadricauda - the change in the number of cells and the fractional composition (the fraction of dividing, «dormant» and dying cells) depended not only on the concentration of the toxicant in the medium, but also on the physiological state of the culture: the level of synchronization and the growth phase. Silver ions at low concentrations had a more pronounced toxic effect on the culture than copper ions at different phases of its development, especially at a concentration of 0.001 mg/l (10-9 M). The main mechanism of the toxic effect of metals is to inhibit the process of cell division. At low concentrations of toxicants, especially at a concentration of 0.001 mg/l, a «paradoxical» effect expressed in the predominance of the fraction of «dormant» cells was revealed. The temporary inhibition of the process of cell division can be regarded as a protective mechanism that allows preserving the integrity of the population and its ability to survive in a changing environment. The obtained data explain the effect of action of low concentrations of substances due to their inclusion in the cell, the subsequent accumulation in the cell and their low excretion.

scholarly journals Advanced experimental approaches to marine water-column biogeochemical processes

2017 ◽  
Vol 75 (1) ◽  
pp. 30-42 ◽  
Author(s):  
Louis Legendre ◽  
Richard B Rivkin ◽  
Nianzhi Jiao
Keyword(s):  
Water Column ◽  
Numerical Models ◽  
Free Water ◽  
Sea Surface ◽  
Biogeochemical Processes ◽  
In Situ Experiments ◽  
Technological Developments ◽  
Approaches To Study ◽  
Experimental Approaches

Abstract This “Food for Thought” article examines the potential uses of several novel scientific and technological developments, which are currently available or being developed, to significantly advance or supplement existing experimental approaches to study water-column biogeochemical processes (WCB-processes). After examining the complementary roles of observation, experiments and numerical models to study WCB-processes, we focus on the main experimental approaches of free-water in situ experiments, and at-sea and on-land meso- and macrocosms. We identify some of the incompletely resolved aspects of marine WCB-processes, and explore advanced experimental approaches that could be used to reduce their uncertainties. We examine three such approaches: free-water experiments of lengthened duration using bioArgo floats and gliders, at-sea mesocosms deployed several 100s m below the sea-surface using new biogeochemical sensors, and 50 m-tall on-land macrocosms. These approaches could lead to significant progress in concepts related to marine WCB-processes.

scholarly journals Erosion and Subsequent Transport State of Escherichia coli from Cowpats

2005 ◽  
Vol 71 (6) ◽  
pp. 2875-2879 ◽  
Author(s):  
Richard William Muirhead ◽  
Robert Peter Collins ◽  
Philip James Bremer
Keyword(s):  
Escherichia Coli ◽  
Surface Waters ◽  
Overland Flow ◽  
Single Cells ◽  
Rainfall Event ◽  
Buffer Strips ◽  
Simulated Rainfall ◽  
E Coli ◽  
Unattached Fraction ◽  
Over Time

ABSTRACT Processes by which fecal bacteria enter overland flow and their transportation state to surface waters are poorly understood, making the effectiveness of measures designed to intercept this pathway, such as vegetated buffer strips, difficult to predict. Freshly made and aged (up to 30 days) cowpats were exposed to simulated rainfall, and samples of the cowpat material and runoff were collected. Escherichia coli in the runoff samples were separated into attached (to particles) and unattached fractions, and the unattached fraction was analyzed to determine if the cells were clumped. Within cowpats, E. coli grew for 6 to 14 days, rather than following a typical logarithmic die-off curve. E. coli numbers in the runoff correlated with numbers inside the cowpat. Most of the E. coli organisms eroded from the cowpats were transported as single cells, and only a small percentage (about 8%) attached to particles. The erosion of E. coli from cowpats and the state in which the cells were transported did not vary with time within a single rainfall event or over time as the cowpats aged and dried out. These findings indicate that cowpats can remain a significant source of E. coli in overland flow for more than 30 days. As well, most of the E. coli organisms eroded from cowpats will occur as readily transportable single cells.

Contribution of Gammarus lacustris to phosphorus recycling in a fishless alpine lake

1999 ◽  
Vol 56 (9) ◽  
pp. 1679-1686 ◽  
Author(s):  
Frank M Wilhelm ◽  
Jeff J Hudson ◽  
David W Schindler
Keyword(s):  
Water Column ◽  
Vertical Migration ◽  
Mountain Lakes ◽  
Plankton Community ◽  
Alpine Lake ◽  
Gammarus Lacustris ◽  
Benthic Pelagic Coupling ◽  
Phosphorus Recycling ◽  
Planktonic Community ◽  
Total P

We estimated the net P transport by Gammarus lacustris from the benthic to pelagic regions of a fishless alpine lake and compared it with P regeneration by the entire plankton community. Gammarus lacustris released between 5.2 and 18.1 ng P·L-1·h-1 (adults only and adults plus immatures, respectively) in the pelagic region during nighttime vertical migration. Additional P released into and removed from the water column due to predation on zooplankton was estimated at 1.87 and 2.3 ng P·L-1·h-1, respectively. The net daily regeneration of 52.2-181.4 ng P·L-1·day-1 by the G. lacustris population represented 9.5-32.9% of the total P regenerated by the planktonic community. The majority of the P released by G. lacustris represents "new" P to the pelagic zone because it originated in sediments. We conclude that G. lacustris can represent an important link in benthic-pelagic coupling in oligotrophic mountain lakes.

scholarly journals Radiocesium in the Taiwan Strait and the Kuroshio east of Taiwan from 2018 to 2019

2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Wei-Jen Huang ◽  
Ming-Ta Lee ◽  
Kuei-Chen Huang ◽  
Kai-Jung Kao ◽  
Ming-An Lee ◽  
...  
Keyword(s):  
Water Column ◽  
Surface Waters ◽  
Half Life ◽  
North Pacific Ocean ◽  
Taiwan Strait ◽  
Depth Range ◽  
Near Surface ◽  
Activity Concentrations ◽  
The Taiwan Strait ◽  
The Kuroshio

AbstractThe release of anthropogenic radiocesium to the North Pacific Ocean (NPO) has occurred in the past 60 years. Factors controlling 137Cs (half-life, 30.2 year) and 134Cs (half-life, 2.06 year) activity concentrations in the Kuroshio east of Taiwan and the Taiwan Strait (latitude 20° N–27° N, longitude 116° E–123° E) remain unclear. This study collected seawater samples throughout this region and analyzed 134Cs and 137Cs activity concentrations between 2018 and 2019. A principal component analysis (PCA) was performed to analyze the controlling factors of radiocesium. Results of all 134Cs activity concentrations were below the detection limit (0.5 Bq m−3). Analyses of water column 137Cs profiles revealed a primary concentration peak (2.1–2.2 Bq m−3) at a depth range of 200–400 m (potential density σθ: 25.3 to 26.1 kg m−3). The PCA result suggests that this primary peak was related to density layers in the water column. A secondary 137Cs peak (1.90 Bq m−3) was observed in the near-surface waters (σθ = 18.8 to 21.4 kg m−3) and was possibly related to upwelling and river-to-sea mixing on the shelf. In the Taiwan Strait, 137Cs activity concentrations in the near-surface waters were higher in the summer than in the winter. We suggest that upwelling facilitates the vertical transport of 137Cs at the shelf break of the western NPO.

scholarly journals Patterns of distribution and abundance of larval phosichthyidae (actinopterygii, stomiiformes) in southeastern Brazilian waters

2011 ◽  
Vol 59 (3) ◽  
pp. 213-229 ◽  
Author(s):  
Cássia Gôngora Goçalo ◽  
Mario Katsuragawa ◽  
Ilson Carlos Almeida da Silveira
Keyword(s):  
Vertical Distribution ◽  
Water Column ◽  
Vertical Migration ◽  
Diel Vertical Migration ◽  
Distribution Patterns ◽  
Southeastern Brazil ◽  
Patterns Of Distribution ◽  
Oceanic Region ◽  
Brazil Current ◽  
Horizontal And Vertical Distribution

Horizontal and vertical distribution patterns and abundance of larval phosichthyids were investigated from oblique and depth-stratified towns off Southeastern brazilian waters, from São Tomé cape (41ºW.; 22ºS.) to São Sebastião island (45ºW.; 24ºS.). The sampling was performed during two cruises (January/2002 -summer; August/2002 -winter). Overall 538 larvae of Phosichthyidae were collected during summer and 158 in the winter. Three species, Pollichthys mauli, Vinciguerria nimbaria and Ichthyioccoccus sp. occurred in the area, but Ichthyioccoccus sp. was extremely rare represented by only one specimen, caught in the oceanic region during the summer. Geographically, larval were concentrated in the oceanic region, and vertically distributed mainly between the surface and 80 m depth in the summer and winter. Larvae were more abundant during the night, performing a diel vertical migration in the water column. The results suggest that the meandering and eddies of Brazil Current play important role on the transport and distribution patterns of larval phosichthyids over the oceanic and neritic area in the Southeastern Brazil.

scholarly journals Extensive Regulation of Metabolism and Growth during the Cell Division Cycle

2014 ◽  
Author(s):  
Nikolai Slavov ◽  
David Botstein ◽  
Amy Caudy
Keyword(s):  
Gene Expression ◽  
Oxygen Consumption ◽  
Cell Division ◽  
Single Cell ◽  
Single Cells ◽  
Emergent Behavior ◽  
Yeast Cells ◽  
Physiological Data ◽  
Synchronized Cultures ◽  
Metabolic Cycle

Yeast cells grown in culture can spontaneously synchronize their respiration, metabolism, gene expression and cell division. Such metabolic oscillations in synchronized cultures reflect single-cell oscillations, but the relationship between the oscillations in single cells and synchronized cultures is poorly understood. To understand this relationship and the coordination between metabolism and cell division, we collected and analyzed DNA-content, gene-expression and physiological data, at hundreds of time-points, from cultures metabolically-synchronized at different growth rates, carbon sources and biomass densities. The data enabled us to extend and generalize our mechanistic model, based on ensemble average over phases (EAP), connecting the population-average gene-expression of asynchronous cultures to the gene-expression dynamics in the single-cells comprising the cultures. The extended model explains the carbon-source specific growth-rate responses of hundreds of genes. Our physiological data demonstrate that the frequency of metabolic cycling in synchronized cultures increases with the biomass density, suggesting that this cycling is an emergent behavior, resulting from the entraining of the single-cell metabolic cycle by a quorum-sensing mechanism, and thus underscoring the difference between metabolic cycling in single cells and in synchronized cultures. Measurements of constant levels of residual glucose across metabolically synchronized cultures indicate that storage carbohydrates are required to fuel not only the G1/S transition of the division cycle but also the metabolic cycle. Despite the large variation in profiled conditions and in the scale of their dynamics, most genes preserve invariant dynamics of coordination with each other and with the rate of oxygen consumption. Similarly, the G1/S transition always occurs at the beginning, middle or end of the high oxygen consumption phases, analogous to observations in human and drosophila cells. These results highlight evolutionary conserved coordination among metabolism, cell growth and division.

scholarly journals A Review of Hydraulic Fracturing Simulation

2021 ◽  
Author(s):  
Bin Chen ◽  
Beatriz Ramos Barboza ◽  
Yanan Sun ◽  
Jie Bai ◽  
Hywel R Thomas ◽  
...  
Keyword(s):  
Hydraulic Fracturing ◽  
State Of The Art ◽  
Numerical Models ◽  
Gas Production ◽  
Physical Processes ◽  
Horizontal Drilling ◽  
Improve Treatment ◽  
Multi Stage ◽  
Pros And Cons ◽  
Treatment Designs

AbstractAlong with horizontal drilling techniques, multi-stage hydraulic fracturing has improved shale gas production significantly in past decades. In order to understand the mechanism of hydraulic fracturing and improve treatment designs, it is critical to conduct modelling to predict stimulated fractures. In this paper, related physical processes in hydraulic fracturing are firstly discussed and their effects on hydraulic fracturing processes are analysed. Then historical and state of the art numerical models for hydraulic fracturing are reviewed, to highlight the pros and cons of different numerical methods. Next, commercially available software for hydraulic fracturing design are discussed and key features are summarised. Finally, we draw conclusions from the previous discussions in relation to physics, method and applications and provide recommendations for further research.

Temporal and spatial distribution and abundance of blue swimmer crab (Portunus pelagicus) larvae in a temperate gulf

2004 ◽  
Vol 55 (8) ◽  
pp. 809 ◽  
Author(s):  
Simon R. Bryars ◽  
Jon. N. Havenhand
Keyword(s):  
Spatial Distribution ◽  
Surface Waters ◽  
Vertical Migration ◽  
South Australia ◽  
Temporal And Spatial Distribution ◽  
Portunus Pelagicus ◽  
Limited Sampling ◽  
Sampling Programme ◽  
Temporal And Spatial ◽  
Stage 1

A plankton-sampling programme for blue swimmer crab (Portunus pelagicus) larvae was conducted in the temperate waters of Gulf St Vincent, South Australia, to investigate: (1) if larval hatching is seasonal; (2) if larvae are restricted to surface waters; (3) if larvae are hatched offshore; and (4) if larval development occurs offshore. The temporal and spatial distribution and abundance of larvae indicated that hatching and zoeal development occur mainly in deeper offshore waters during the warmer months of November to March, and that zoeal development occurs in a range of depths from the neuston to at least 14 m. Although peaks in abundance usually occurred in the upper 3 m, zoeae were distributed throughout the water column, with the majority occurring in sub-surface waters below 1 m depth. There was no evidence for a daylight ontogenetic or tidal vertical migration in the four zoeal stages. Limited sampling revealed no evidence for a diurnal vertical migration in stage-1 zoea. Although the seasonal and inshore-offshore patterns of hatching observed in the study were typical for a portunid species, the broad vertical distribution differed from that observed for P. pelagicus in previous studies.

Fog forecasting for Schiphol airport at sub-kilometre scale.  

2021 ◽  
Author(s):  
Gert-Jan Steeneveld ◽  
Roosmarijn Knol
Keyword(s):  
Spatial Resolution ◽  
Numerical Models ◽  
Wrf Model ◽  
Horizontal Resolution ◽  
Physical Processes ◽  
Radiation Fog ◽  
Fog Forecasting ◽  
Elevation Data ◽  
The Individual ◽  
The Impact

<p>Fog is a critical weather phenomenon for safety and operations in aviation. Unfortunately, the forecasting of radiation fog remains challenging due to the numerous physical processes that play a role and their complex interactions, in addition to the vertical and horizontal resolution of the numerical models. In this study we evaluate the performance of the Weather Research and Forecasting (WRF) model for a radiation fog event at Schiphol Amsterdam Airport (The Netherlands) and further develop the model towards a 100 m grid spacing. Hence we introduce high resolution land use and land elevation data. In addition we study the role of gravitational droplet settling, advection of TKE, top-down diffusion caused by strong radiative cooling at the fog top. Finally the impact of heat released by the terminal areas on the fog formation is studied. The model outcomes are evaluated against 1-min weather observations near multiple runways at the airport.</p><p>Overall we find the WRF model shows an reasonable timing of the fog onset and is well able to reproduce the visibility and meteorological conditions as observed during the case study. The model appears to be relatively insensitive to the activation of the individual physical processes. An increased spatial resolution to 100 m generally results in a better timing of the fog onset differences up to three hours, though not for all runways. The effect of the refined landuse dominates over the effect of refined elevation data. The modelled fog dissipation systematically occurs 3-4 h hours too early, regardless of physical processes or spatial resolution. Finally, the introduction of heat from terminal buildings delays the fog onset with a maximum of two hours, an overestimated visibility of 100-200 m and a decrease of the LWC with 0.10-0.15 g/kg compared to the reference.</p>

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