scholarly journals Real-time interactive simulations of large-scale systems on personal computers and cell phones: Toward patient-specific heart modeling and other applications

2019 ◽  
Vol 5 (3) ◽  
pp. eaav6019 ◽  
Author(s):  
Abouzar Kaboudian ◽  
Elizabeth M. Cherry ◽  
Flavio H. Fenton
Keyword(s):  
Real Time ◽  
High Performance ◽  
Large Scale ◽  
Personal Computers ◽  
Patient Specific ◽  
Dynamics Modeling ◽  
Large Scale Systems ◽  
Simulation Tools ◽  
Cardiac Dynamics ◽  
Research And Education

Cardiac dynamics modeling has been useful for studying and treating arrhythmias. However, it is a multiscale problem requiring the solution of billions of differential equations describing the complex electrophysiology of interconnected cells. Therefore, large-scale cardiac modeling has been limited to groups with access to supercomputers and clusters. Many areas of computational science face similar problems where computational costs are too high for personal computers so that supercomputers or clusters currently are necessary. Here, we introduce a new approach that makes high-performance simulation of cardiac dynamics and other large-scale systems like fluid flow and crystal growth accessible to virtually anyone with a modest computer. For cardiac dynamics, this approach will allow not only scientists and students but also physicians to use physiologically accurate modeling and simulation tools that are interactive in real time, thereby making diagnostics, research, and education available to a broader audience and pushing the boundaries of cardiac science.

Fault detection algorithms for real-time diagnosis in large-scale systems

2001 ◽  
Author(s):  
Thiagalingam Kirubarajan ◽  
Venkatesh N. Malepati ◽  
Somnath Deb ◽  
Jie Ying
Keyword(s):  
Fault Detection ◽  
Real Time ◽  
Large Scale ◽  
Large Scale Systems ◽  
Detection Algorithms ◽  
Time Diagnosis

scholarly journals HiBuffer: Buffer Analysis of 10-Million-Scale Spatial Data in Real Time

2018 ◽  
Vol 7 (12) ◽  
pp. 467 ◽  
Author(s):  
Mengyu Ma ◽  
Ye Wu ◽  
Wenze Luo ◽  
Luo Chen ◽  
Jun Li ◽  
...  
Keyword(s):  
Real Time ◽  
Spatial Data ◽  
High Performance ◽  
Large Scale ◽  
Computation Time ◽  
Buffer Analysis ◽  
Data Volume ◽  
Time Buffer ◽  
Real World Datasets ◽  
Spatial Indexes

Buffer analysis, a fundamental function in a geographic information system (GIS), identifies areas by the surrounding geographic features within a given distance. Real-time buffer analysis for large-scale spatial data remains a challenging problem since the computational scales of conventional data-oriented methods expand rapidly with increasing data volume. In this paper, we introduce HiBuffer, a visualization-oriented model for real-time buffer analysis. An efficient buffer generation method is proposed which introduces spatial indexes and a corresponding query strategy. Buffer results are organized into a tile-pyramid structure to enable stepless zooming. Moreover, a fully optimized hybrid parallel processing architecture is proposed for the real-time buffer analysis of large-scale spatial data. Experiments using real-world datasets show that our approach can reduce computation time by up to several orders of magnitude while preserving superior visualization effects. Additional experiments were conducted to analyze the influence of spatial data density, buffer radius, and request rate on HiBuffer performance, and the results demonstrate the adaptability and stability of HiBuffer. The parallel scalability of HiBuffer was also tested, showing that HiBuffer achieves high performance of parallel acceleration. Experimental results verify that HiBuffer is capable of handling 10-million-scale data.

Visualising large-scale geodynamic simulations: How to Dive into Earth's Mantle with Virtual Reality

2020 ◽  
Author(s):  
Markus Wiedemann ◽  
Bernhard S.A. Schuberth ◽  
Lorenzo Colli ◽  
Hans-Peter Bunge ◽  
Dieter Kranzlmüller
Keyword(s):  
Virtual Reality ◽  
Real Time ◽  
High Performance ◽  
Large Scale ◽  
Large Data ◽  
Optimization Techniques ◽  
Physical Parameters ◽  
Mantle Flow ◽  
Data Set ◽  
Precise Knowledge

<p>Precise knowledge of the forces acting at the base of tectonic plates is of fundamental importance, but models of mantle dynamics are still often qualitative in nature to date. One particular problem is that we cannot access the deep interior of our planet and can therefore not make direct in situ measurements of the relevant physical parameters. Fortunately, modern software and powerful high-performance computing infrastructures allow us to generate complex three-dimensional models of the time evolution of mantle flow through large-scale numerical simulations.</p><p>In this project, we aim at visualizing the resulting convective patterns that occur thousands of kilometres below our feet and to make them "accessible" using high-end virtual reality techniques.</p><p>Models with several hundred million grid cells are nowadays possible using the modern supercomputing facilities, such as those available at the Leibniz Supercomputing Centre. These models provide quantitative estimates on the inaccessible parameters, such as buoyancy and temperature, as well as predictions of the associated gravity field and seismic wavefield that can be tested against Earth observations.</p><p>3-D visualizations of the computed physical parameters allow us to inspect the models such as if one were actually travelling down into the Earth. This way, convective processes that occur thousands of kilometres below our feet are virtually accessible by combining the simulations with high-end VR techniques.</p><p>The large data set used here poses severe challenges for real time visualization, because it cannot fit into graphics memory, while requiring rendering with strict deadlines. This raises the necessity to balance the amount of displayed data versus the time needed for rendering it.</p><p>As a solution, we introduce a rendering framework and describe our workflow that allows us to visualize this geoscientific dataset. Our example exceeds 16 TByte in size, which is beyond the capabilities of most visualization tools. To display this dataset in real-time, we reduce and declutter the dataset through isosurfacing and mesh optimization techniques.</p><p>Our rendering framework relies on multithreading and data decoupling mechanisms that allow to upload data to graphics memory while maintaining high frame rates. The final visualization application can be executed in a CAVE installation as well as on head mounted displays such as the HTC Vive or Oculus Rift. The latter devices will allow for viewing our example on-site at the EGU conference.</p>

scholarly journals Real-time Analysis of City Scale Transportation Networks in New Orleans Metropolitan Area using an Agent Based Model Approach

2019 ◽  
Vol 271 ◽  
pp. 06007
Author(s):  
Millard McElwee ◽  
Bingyu Zhao ◽  
Kenichi Soga
Keyword(s):  
New Orleans ◽  
Real Time ◽  
High Performance ◽  
Large Scale ◽  
Transportation Networks ◽  
Transportation Network ◽  
Regional Scale ◽  
Agent Based Model ◽  
Agent Based ◽  
Real Time Analysis

The primary focus of this research is to develop and implement an agent-based model (ABM) to analyze the New Orleans Metropolitan transportation network near real-time. ABMs have grown in popularity because of their ability to analyze multifaceted community scale resilience with hundreds of thousands of links and millions of agents. Road closures and reduction in capacities are examples of influences on the weights or removal of edges which can affect the travel time, speed, and route of agents in the transportation model. Recent advances in high-performance computing (HPC) have made modeling networks on the city scale much less computationally intensive. We introduce an open-source ABM which utilizes parallel distributed computing to enable faster convergence to large scale problems. We simulate 50,000 agents on the entire southeastern Louisiana road network and part of Mississippi as well. This demonstrates the capability to simulate both city and regional scale transportation networks near real time.

Monitoring and Controlling Large Scale Systems

2010 ◽  
pp. 141-167
Author(s):  
Valentin Cristea ◽  
Ciprian Dobre ◽  
Corina Stratan ◽  
Florin Pop
Keyword(s):  
Distributed Systems ◽  
Performance Management ◽  
High Performance ◽  
Large Scale ◽  
Survey Study ◽  
Large Scale Systems ◽  
General Management ◽  
Large Numbers ◽  
Scalable Monitoring ◽  
High Performance Computers

The architectural shift presented in the previous chapters towards high performance computers assembled from large numbers of commodity resources raises numerous design issues and assumptions pertaining to traceability, fault tolerance and scalability. Hence, one of the key challenges faced by high performance distributed systems is scalable monitoring of system state. The aim of this chapter is to realize a survey study of existing work and trends in distributed systems monitoring by introducing the involved concepts and requirements, techniques, models and related standardization activities. Monitoring can be defined as the process of dynamic collection, interpretation and presentation of information concerning the characteristics and status of resources of interest. It is needed for various purposes such as debugging, testing, program visualization and animation. It may also be used for general management activities, which have a more permanent and continuous nature (performance management, configuration management, fault management, security management, etc.). In this case the behavior of the system is observed and monitoring information is gathered. This information is used to make management decisions and perform the appropriate control actions on the system. Unlike monitoring which is generally a passive process, control actively changes the behavior of the managed system and it has to be considered and modeled separately. Monitoring proves to be an essential process to observe and improve the reliability and the performance of large-scale distributed systems.

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