SU-E-T-23: A Developing Australian Network for Datamining and Modelling Routine Radiotherapy Clinical Data and Radiomics Information for Rapid Learning and Clinical Decision Support

2015 ◽  
Vol 42 (6Part12) ◽  
pp. 3335-3336
Author(s):  
D Thwaites ◽  
L Holloway ◽  
M Bailey ◽  
S Barakat ◽  
M Carolan ◽  
...  
2020 ◽  
Vol 15 (1) ◽  
Author(s):  
Jannik Schaaf ◽  
Martin Sedlmayr ◽  
Johanna Schaefer ◽  
Holger Storf

Abstract Background Rare Diseases (RDs), which are defined as diseases affecting no more than 5 out of 10,000 people, are often severe, chronic and life-threatening. A main problem is the delay in diagnosing RDs. Clinical decision support systems (CDSSs) for RDs are software systems to support clinicians in the diagnosis of patients with RDs. Due to their clinical importance, we conducted a scoping review to determine which CDSSs are available to support the diagnosis of RDs patients, whether the CDSSs are available to be used by clinicians and which functionalities and data are used to provide decision support. Methods We searched PubMed for CDSSs in RDs published between December 16, 2008 and December 16, 2018. Only English articles, original peer reviewed journals and conference papers describing a clinical prototype or a routine use of CDSSs were included. For data charting, we used the data items “Objective and background of the publication/project”, “System or project name”, “Functionality”, “Type of clinical data”, “Rare Diseases covered”, “Development status”, “System availability”, “Data entry and integration”, “Last software update” and “Clinical usage”. Results The search identified 636 articles. After title and abstracting screening, as well as assessing the eligibility criteria for full-text screening, 22 articles describing 19 different CDSSs were identified. Three types of CDSSs were classified: “Analysis or comparison of genetic and phenotypic data,” “machine learning” and “information retrieval”. Twelve of nineteen CDSSs use phenotypic and genetic data, followed by clinical data, literature databases and patient questionnaires. Fourteen of nineteen CDSSs are fully developed systems and therefore publicly available. Data can be entered or uploaded manually in six CDSSs, whereas for four CDSSs no information for data integration was available. Only seven CDSSs allow further ways of data integration. thirteen CDSS do not provide information about clinical usage. Conclusions Different CDSS for various purposes are available, yet clinicians have to determine which is best for their patient. To allow a more precise usage, future research has to focus on CDSSs RDs data integration, clinical usage and updating clinical knowledge. It remains interesting which of the CDSSs will be used and maintained in the future.


2015 ◽  
Vol 11 (2) ◽  
pp. e206-e211 ◽  
Author(s):  
Peter Paul Yu

This article describes three unique sources of health data that underlie fundamentally different types of knowledge bases which feed into clinical decision support systems.


Stroke ◽  
2017 ◽  
Vol 48 (suppl_1) ◽  
Author(s):  
Benjamin R Kummer ◽  
Jorge M Luna ◽  
Charles C Esenwa ◽  
Hojjat Salmasian ◽  
David K Vawdrey ◽  
...  

Introduction: Real-time identification of patients with acute ischemic stroke (AIS) in the electronic health record (EHR) can enhance care delivery systems, clinical decision support, and research subject recruitment. EHR data that is accessible during a patient’s admission may be used to identify patients with AIS, but established methods for characterizing which data to use have not yet been determined. Hypotheses: 1. An EHR “phenotype” of AIS can be identified using clinical EHR data. 2. Machine learning can identify the AIS phenotype using similar inputs with greater accuracy than clinician-specified identification algorithms. Methods: Two stroke neurologists selected generalizable AIS-related clinical data points from the Columbia University Medical Center EHR (clinical laboratory results and medication, imaging, and stroke service list orders) to identify the AIS phenotype, and determined pre-specified priority logic based on institutional practice patterns. Separately, a regularized logistic regression (RLR) model was applied to all available neurology-related order sets and clinical laboratory inputs. The classification accuracy of the two algorithms was compared using a “gold standard” data set, consisting of our institution’s ischemic stroke registry from January 1 st , 2015 to March 31 st , 2016. Negative controls were selected from all patients admitted to the neurology service at our institution during the same time period. Results: Our data contained 482 patients with AIS and 3,628 negative controls. The clinician-specified identification algorithm identified the AIS phenotype with sensitivity of 90.6%, specificity of 50.4%, and positive predictive value (PPV) of 93.5%. In comparison, the RLR-based algorithm had a sensitivity of 96.3%, specificity of 52.2%, and PPV of 93.8%. Conclusions: We determined an AIS phenotype that could be identified using clinical, non-claims data that is available during a patient’s admission, and used machine learning to optimize the classifying ability. While specificity is low, the high sensitivity may allow use for screening and clinical decision support. Further studies are needed to externally validate these findings and optimize algorithm specificity.


2020 ◽  
Author(s):  
Jonah Feldman ◽  
Adam Szerencsy ◽  
Devin Mann ◽  
Jonathan Austrian ◽  
Ulka Kothari ◽  
...  

BACKGROUND The transformation of healthcare during COVID-19 with the rapid expansion of telemedicine visits presents new challenges to chronic care and preventive health providers. Clinical decision support (CDS) is critically important to chronic care providers, and CDS malfunction is common during times of change. It is essential to regularly re-assess an organization's ambulatory CDS program to maintain care quality. This is especially true after an immense change, like the COVID-19 telemedicine expansion. OBJECTIVE Our objective is to re-assess the ambulatory CDS program at a large academic medical center in light of telemedicine's expansion in response to COVID-19. METHODS Our clinical informatics team devised a practical framework for an intra-pandemic ambulatory CDS assessment focused on the impact of the telemedicine expansion. This assessment began with a quantitative analysis comparing CDS alert performance in the context of in-person and telemedicine visits. Board-certified physician informaticists then completed a formal workflow review of alerts with inferior performance in telemedicine visits. Informaticists then reported on themes and optimization opportunities through the existing CDS governance structure. RESULTS Our assessment revealed that 10 of our top 40 alerts by volume were not firing as expected in telemedicine visits. In 3 out of the top 5 alerts, providers were significantly less likely to take action in telemedicine when compared to office visits. Cumulatively, alerts in telemedicine encounters had an action taken rate of 5.3% (3,257/64,938) compared to 8.3% (19,427/233,636) for office visits. Observations from a clinical informaticist workflow review included: (1) Telemedicine visits have different workflows than office visits. Some alerts developed for the office were not appearing at the optimal time in the telemedicine workflow. (2) Missing clinical data is a common reason for decreased alert firing seen in telemedicine visits. (3) Remote patient monitoring and patient-reported clinical data entered through the portal could replace data collection usually completed in the office by an MA or RN. CONCLUSIONS Conclusions: In a large academic medical center at the pandemic epicenter, an intra-pandemic ambulatory CDS assessment revealed clinically significant CDS malfunctions that highlight the importance of re-assessing ambulatory CDS performance after the telemedicine expansion. CLINICALTRIAL


2013 ◽  
Vol 46 (2) ◽  
pp. 52
Author(s):  
CHRISTOPHER NOTTE ◽  
NEIL SKOLNIK

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