scholarly journals A nonrigid registration method for correcting brain deformation induced by tumor resection

2014 ◽  
Vol 41 (10) ◽  
pp. 101710 ◽  
Author(s):  
Yixun Liu ◽  
Chengjun Yao ◽  
Fotis Drakopoulos ◽  
Jinsong Wu ◽  
Liangfu Zhou ◽  
...  
2002 ◽  
Vol 49 (3) ◽  
pp. 782-788 ◽  
Author(s):  
E. Debreuve ◽  
M. Barlaud ◽  
I. Laurette ◽  
G. Aubert ◽  
J. Darcourt

2014 ◽  
Vol 33 (1) ◽  
pp. 147-158 ◽  
Author(s):  
D. Caleb Rucker ◽  
Yifei Wu ◽  
Logan W. Clements ◽  
Janet E. Ondrake ◽  
Thomas S. Pheiffer ◽  
...  

2021 ◽  
Author(s):  
Parastoo Farnia ◽  
Bahador Makkiabadi ◽  
Meysam Alimohammadi ◽  
Ebrahim Najafzadeh ◽  
Maryam Basij ◽  
...  

Brain shift is an important obstacle for the application of image guidance during neurosurgical interventions. There has been a growing interest in intra-operative imaging systems to update the image-guided surgery systems with real-time data. However, due to the innate limitations of the current imaging modalities, accurate and real-time brain shift compensation remains as a challenging problem. In this study, application of the intra-operative photoacoustic (PA) imaging and registration of the intra-operative PA images with pre-operative brain MR images is proposed to compensate brain deformation during surgery. Finding a satisfactory multimodal image registration method is a challenging problem due to complicated and unpredictable nature of brain deformation. In this study, the co-sparse analysis model is proposed for PA-MR image registration which can capture the interdependency of two modalities. The proposed algorithm works based on the minimization of mapping transform by using a pair of analysis operators. These operators are learned by the alternating direction method of multipliers. The method was evaluated using experimental phantom and ex-vivo data obtained from mouse brain. The results of phantom data show about 60% and 63% improvement in root mean square error (RMSE) and target registration error (TRE) in comparison with commonly used normalized mutual information registration method. In addition, the results of mouse brain and phantom data shown more accurate performance for PA versus ultrasound imaging for brain shift calculation. Finally, by using the proposed registration method, the intra-operative PA images could become a promising tool when the brain shift invalidated pre-operative MRI.


Author(s):  
Yixun Liu ◽  
Andriy Kot ◽  
Fotis Drakopoulos ◽  
Chengjun Yao ◽  
Andriy Fedorov ◽  
...  

2010 ◽  
Vol 37 (7Part1) ◽  
pp. 3760-3772 ◽  
Author(s):  
Luiza Bondar ◽  
Mischa S. Hoogeman ◽  
Eliana M. Vásquez Osorio ◽  
Ben J. M. Heijmen

2012 ◽  
Vol 39 (11) ◽  
pp. 6858-6867 ◽  
Author(s):  
Jennifer Pursley ◽  
Petter Risholm ◽  
Andriy Fedorov ◽  
Kemal Tuncali ◽  
Fiona M. Fennessy ◽  
...  

2005 ◽  
Vol 61 (2) ◽  
pp. 594-607 ◽  
Author(s):  
David Sarrut ◽  
Vlad Boldea ◽  
Myriam Ayadi ◽  
Jean-Noël Badel ◽  
Chantal Ginestet ◽  
...  

2020 ◽  
Vol 6 (1) ◽  
Author(s):  
Ramy A. Zeineldin ◽  
Mohamed E. Karar ◽  
Jan Coburger ◽  
Christian R. Wirtz ◽  
Franziska Mathis-Ullrich ◽  
...  

AbstractIntraoperative brain deformation, so-called brain shift, affects the applicability of preoperative magnetic resonance imaging (MRI) data to assist the procedures of intraoperative ultrasound (iUS) guidance during neurosurgery. This paper proposes a deep learning-based approach for fast and accurate deformable registration of preoperative MRI to iUS images to correct brain shift. Based on the architecture of 3D convolutional neural networks, the proposed deep MRI-iUS registration method has been successfully tested and evaluated on the retrospective evaluation of cerebral tumors (RESECT) dataset. This study showed that our proposed method outperforms other registration methods in previous studies with an average mean squared error (MSE) of 85. Moreover, this method can register three 3D MRI-US pair in less than a second, improving the expected outcomes of brain surgery.


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