Evaluation of time-resolved multi-distance methods to retrieve absorption and reduced scattering coefficients of adult heads in vivo: Optical parameters dependences on geometrical structures of the models used to calculate reflectance

2016 ◽  
Author(s):  
T. Tanifuji
Keyword(s):  
Optical Parameters ◽  
Geometrical Structures ◽  
Time Resolved ◽  
Scattering Coefficients ◽  
Distance Methods

Analysis of Short Pulse Radiation Transport Through Tissues for Tumor Detection

2005 ◽  
Author(s):  
Soumyadipta Basu ◽  
Gopalendu Pal ◽  
Kunal Mitra ◽  
Michael S. Grace
Keyword(s):  
Radiation Transport ◽  
Numerical Study ◽  
Short Pulse ◽  
Optical Detection ◽  
Skin Surface ◽  
Tissue Samples ◽  
Time Resolved ◽  
Detection Scheme ◽  
Scattering Coefficients

The objective of this paper is to perform a comprehensive experimental and numerical study to analyze short pulse laser propagation through animal tissue samples and phantoms with inhomogeneities imbedded in them. Initially a parametric study of different absorption and scattering coefficients of the tissue phantoms and of inhomogeneities imbedded in them, size and location of the inhomogeneities is performed in order to optimize the time resolved optical detection scheme. Tissues can be modeled primarily as having two main layers-skin and the underlying muscle. To study the interaction of light with the tissue layers, experiments are next performed on freshly excised rat tissue samples to validate the time varying optical signatures of rat skin and muscle with the numerical model. The next step is to perform in vivo imaging of anaesthetized rats with tumors injected on the skin as well as below the skin surface in order to test the optical detection scheme. The goal is the detection and characterization of tumors in rats.

Determination of optical parameters of pulp suspensions by time-resolved detection of photoacoustic signals and total diffuse reflectance measurements

Open Physics ◽  
2010 ◽  
Vol 8 (2) ◽  
Author(s):  
Zuomin Zhao ◽  
Matti Törmänen ◽  
Risto Myllylä
Keyword(s):  
Attenuation Coefficient ◽  
Diffuse Reflectance ◽  
Lignin Content ◽  
Kappa Number ◽  
Laser Source ◽  
Optical Parameters ◽  
Time Resolved ◽  
Scattering Coefficients ◽  
Pulp Suspensions ◽  
Effective Attenuation Coefficient

AbstractTime-resolved photoacoustics were used to measure the optical parameters of pulp suspensions for the first time. Reconstructing stress distribution along the direction of the incident laser light allows the effective attenuation coefficient of these suspensions to be determined. Simultaneously, the total diffuse reflectance of the suspensions was measured by the same laser source. Based on the effective attenuation coefficient and total diffuse reflectance, the absorption and reduced scattering coefficients of pulp suspensions can be calculated. In this study, three kinds of pulp suspensions with different kappa number (2, 13, and 16), a measure of lignin content in pulp fibers, were diluted with water to make samples with a consistency range from 1% to 5%, and studied at 355 nm wavelength. The results showed that the optical coefficients were approximately proportional to pulp consistency; on the other hand, the absorption coefficient was linearly correlated with kappa number, but the reduced scattering coefficient was not. Therefore, by determining its optical parameters, it is possible to extract the consistency and kappa number of an unknown pulp suspension.

scholarly journals Real-time observation of tetrapyrrole binding to an engineered bacterial phytochrome

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Yusaku Hontani ◽  
Mikhail Baloban ◽  
Francisco Velazquez Escobar ◽  
Swetta A. Jansen ◽  
Daria M. Shcherbakova ◽  
...  
Keyword(s):  
Real Time ◽  
Rational Design ◽  
Near Infrared ◽  
Fluorescent Proteins ◽  
Covalent Bond ◽  
Binding Pocket ◽  
Tissue Imaging ◽  
Covalent Attachment ◽  
Time Resolved

AbstractNear-infrared fluorescent proteins (NIR FPs) engineered from bacterial phytochromes are widely used for structural and functional deep-tissue imaging in vivo. To fluoresce, NIR FPs covalently bind a chromophore, such as biliverdin IXa tetrapyrrole. The efficiency of biliverdin binding directly affects the fluorescence properties, rendering understanding of its molecular mechanism of major importance. miRFP proteins constitute a family of bright monomeric NIR FPs that comprise a Per-ARNT-Sim (PAS) and cGMP-specific phosphodiesterases - Adenylyl cyclases - FhlA (GAF) domain. Here, we structurally analyze biliverdin binding to miRFPs in real time using time-resolved stimulated Raman spectroscopy and quantum mechanics/molecular mechanics (QM/MM) calculations. Biliverdin undergoes isomerization, localization to its binding pocket, and pyrrolenine nitrogen protonation in <1 min, followed by hydrogen bond rearrangement in ~2 min. The covalent attachment to a cysteine in the GAF domain was detected in 4.3 min and 19 min in miRFP670 and its C20A mutant, respectively. In miRFP670, a second C–S covalent bond formation to a cysteine in the PAS domain occurred in 14 min, providing a rigid tetrapyrrole structure with high brightness. Our findings provide insights for the rational design of NIR FPs and a novel method to assess cofactor binding to light-sensitive proteins.

scholarly journals Influence of Oxidative Stress on Time-Resolved Oxygen Detection by [Ru(Phen)3]2+ In Vivo and In Vitro

Molecules ◽  
2021 ◽  
Vol 26 (2) ◽  
pp. 485
Author(s):  
Veronika Huntosova ◽  
Denis Horvath ◽  
Robert Seliga ◽  
Georges Wagnieres
Keyword(s):  
Oxidative Stress ◽  
Tissue Oxygenation ◽  
Intact Cell ◽  
Molecular Probes ◽  
Stress Factors ◽  
Time Resolved ◽  
Invasive Approach ◽  
Oxygen Detection

Detection of tissue and cell oxygenation is of high importance in fundamental biological and in many medical applications, particularly for monitoring dysfunction in the early stages of cancer. Measurements of the luminescence lifetimes of molecular probes offer a very promising and non-invasive approach to estimate tissue and cell oxygenation in vivo and in vitro. We optimized the evaluation of oxygen detection in vivo by [Ru(Phen)3]2+ in the chicken embryo chorioallantoic membrane model. Its luminescence lifetimes measured in the CAM were analyzed through hierarchical clustering. The detection of the tissue oxygenation at the oxidative stress conditions is still challenging. We applied simultaneous time-resolved recording of the mitochondrial probe MitoTrackerTM OrangeCMTMRos fluorescence and [Ru(Phen)3]2+ phosphorescence imaging in the intact cell without affecting the sensitivities of these molecular probes. [Ru(Phen)3]2+ was demonstrated to be suitable for in vitro detection of oxygen under various stress factors that mimic oxidative stress: other molecular sensors, H2O2, and curcumin-mediated photodynamic therapy in glioma cancer cells. Low phototoxicities of the molecular probes were finally observed. Our study offers a high potential for the application and generalization of tissue oxygenation as an innovative approach based on the similarities between interdependent biological influences. It is particularly suitable for therapeutic approaches targeting metabolic alterations as well as oxygen, glucose, or lipid deprivation.

scholarly journals A Versatile Setup for Time-Resolved Functional Near Infrared Spectroscopy Based on Fast-Gated Single-Photon Avalanche Diode and on Four-Wave Mixing Laser

2019 ◽  
Vol 9 (11) ◽  
pp. 2366 ◽  
Author(s):  
Laura Di Sieno ◽  
Alberto Dalla Mora ◽  
Alessandro Torricelli ◽  
Lorenzo Spinelli ◽  
Rebecca Re ◽  
...  
Keyword(s):  
Infrared Spectroscopy ◽  
Near Infrared Spectroscopy ◽  
Near Infrared ◽  
Single Photon ◽  
Wave Mixing ◽  
Functional Near Infrared Spectroscopy ◽  
Time Resolved ◽  
Diffusive Medium ◽  
Spectroscopy System

In this paper, a time-domain fast gated near-infrared spectroscopy system is presented. The system is composed of a fiber-based laser providing two pulsed sources and two fast gated detectors. The system is characterized on phantoms and was tested in vivo, showing how the gating approach can improve the contrast and contrast-to-noise-ratio for detection of absorption perturbation inside a diffusive medium, regardless of source-detector separation.

In vivo high-contrast visualization of upconversion nanoparticle labeled virus using time-resolved approach

Nano Today ◽  
2021 ◽  
Vol 40 ◽  
pp. 101264
Author(s):  
Gaoju Pang ◽  
Yingying Zhang ◽  
Xiaoyong Wang ◽  
Huizhuo Pan ◽  
Xinyu Zhang ◽  
...  
Keyword(s):  
High Contrast ◽  
Time Resolved

scholarly journals Fiber-Optic Time-Resolved Fluorescence Sensor for in Vitro Serotonin Determination

1993 ◽  
Vol 47 (5) ◽  
pp. 590-597 ◽  
Author(s):  
Stephane Mottin ◽  
Canh Tran-Minh ◽  
Pierre Laporte ◽  
Raymond Cespuglio ◽  
Michel Jouvet
Keyword(s):  
Chemical Sensor ◽  
Fiber Optic ◽  
Fiber Optic Sensor ◽  
Excitation Wavelength ◽  
Nitrogen Laser ◽  
Time Resolved ◽  
Temporal Effects ◽  
Starting Point

At pH 7 and with the excitation at wavelengths above 315 nm, previously unreported fluorescence of 5-HT (5-hydroxytryptamine) is observed. Two fluorescence bands were observed for 5-HT; the first emits at around 390 nm with an associated lifetime near 1 ns, and the other (well known) emits at 340 nm with an associated lifetime of 2.7 ns. With both static and time-resolved fluorescences, the spectral and temporal effects of the excitation wavelength were studied between 285 and 340 nm. With these basic spectroscopic properties as a starting point, a fiber-optic chemical sensor (FOCS) was developed in order to measure 5-HT with a single-fiber configuration, nitrogen laser excitation, and fast digitizing techniques. Temporal effects including fluorescence of the optical fiber were studied and compared with measurements both directly in cuvette and through the fiber-optic sensor. Less than thirty seconds are required for each measurement. A detection limit of 5-HT is reached in the range of 5 μM. Our system, with an improved sensitivity, could therefore be a possible and convenient “tool” for in vivo determination of 5-HT.

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