Development of classification models to detectSalmonella EnteritidisandSalmonella Typhimuriumfound in poultry carcass rinses by visible-near infrared hyperspectral imaging

2013 ◽  
Author(s):  
Young Wook Seo ◽  
Seung Chul Yoon ◽  
Bosoon Park ◽  
Arthur Hinton ◽  
William R. Windham ◽  
...  
Author(s):  
Aoife Gowen ◽  
Jun-Li Xu ◽  
Ana Herrero-Langreo

Applications of hyperspectral imaging (HSI) to the quantitative and qualitative measurement of samples have grown widely in recent years, due mainly to the improved performance and lower cost of imaging spectroscopy instrumentation. Data sampling is a crucial yet often overlooked step in hyperspectral image analysis, which impacts the subsequent results and their interpretation. In the selection of pixel spectra for the calibration of classification models, the spatial information in HSI data can be exploited. In this paper, a variety of sampling strategies for selection of pixel spectra are presented, exemplified through five case studies. The strategies are compared in terms of the proportion of global variability captured, practicality and predictive model performance. The use of variographic analysis as a guide to the spatial segmentation prior to sampling leads to the selection of representative subsets while reducing the variation in model performance parameters over repeated random selection.


Molecules ◽  
2019 ◽  
Vol 24 (18) ◽  
pp. 3268 ◽  
Author(s):  
Zhu ◽  
Zhou ◽  
Gao ◽  
Bao ◽  
He ◽  
...  

Cotton seed purity is a critical factor influencing the cotton yield. In this study, near-infrared hyperspectral imaging was used to identify seven varieties of cotton seeds. Score images formed by pixel-wise principal component analysis (PCA) showed that there were differences among different varieties of cotton seeds. Effective wavelengths were selected according to PCA loadings. A self-design convolution neural network (CNN) and a Residual Network (ResNet) were used to establish classification models. Partial least squares discriminant analysis (PLS-DA), logistic regression (LR) and support vector machine (SVM) were used as direct classifiers based on full spectra and effective wavelengths for comparison. Furthermore, PLS-DA, LR and SVM models were used for cotton seeds classification based on deep features extracted by self-design CNN and ResNet models. LR and PLS-DA models using deep features as input performed slightly better than those using full spectra and effective wavelengths directly. Self-design CNN based models performed slightly better than ResNet based models. Classification models using full spectra performed better than those using effective wavelengths, with classification accuracy of calibration, validation and prediction sets all over 80% for most models. The overall results illustrated that near-infrared hyperspectral imaging with deep learning was feasible to identify cotton seed varieties.


Author(s):  
Chih-Cheng Pai ◽  
Yang-Chu Chen ◽  
Keng-Hao Liu ◽  
Yuan-Hsun Tsai ◽  
Po-Chi Hu ◽  
...  

2020 ◽  
Author(s):  
L. Granlund ◽  
M. Keinänen ◽  
T. Tahvanainen

Abstract Aims Hyperspectral imaging (HSI) has high potential for analysing peat cores, but methodologies are deficient. We aimed for robust peat type classification and humification estimation. We also explored other factors affecting peat spectral properties. Methods We used two laboratory setups: VNIR (visible to near-infrared) and SWIR (shortwave infrared) for high resolution imaging of intact peat profiles with fen-bog transitions. Peat types were classified with support vector machines, indices were developed for von Post estimation, and K-means clustering was used to analyse stratigraphic patterns in peat quality. With separate experiments, we studied spectral effects of drying and oxidation. Results Despite major effects, oxidation and water content did not impede robust HSI classification. The accuracy between Carex peat and Sphagnum peat in validation was 80% with VNIR and 81% with SWIR data. The spectral humification indices had accuracies of 82% with VNIR and 56%. Stratigraphic HSI patterns revealed that 36% of peat layer shifts were inclined by over 20 degrees. Spectral indices were used to extrapolate visualisations of element concentrations. Conclusions HSI provided reliable information of basic peat quality and was useful in visual mapping, that can guide sampling for other analyses. HSI can manage large amounts of samples to widen the scope of detailed analysis beyond single profiles and it has wide potential in peat research beyond the exploratory scope of this paper. We were able to confirm the capacity of HSI to reveal shifts of peat quality, connected to ecosystem-scale change.


LWT ◽  
2021 ◽  
pp. 111737
Author(s):  
Yujie Wang ◽  
Ying Liu ◽  
Yuyu Chen ◽  
Qingqing Cui ◽  
Luqing Li ◽  
...  

2021 ◽  
Vol 175 ◽  
pp. 111497
Author(s):  
Weijie Lan ◽  
Benoit Jaillais ◽  
Catherine M.G.C. Renard ◽  
Alexandre Leca ◽  
Songchao Chen ◽  
...  

LWT ◽  
2021 ◽  
Vol 143 ◽  
pp. 111092
Author(s):  
Jose Marcelino S. Netto ◽  
Fernanda A. Honorato ◽  
Patrícia M. Azoubel ◽  
Louise E. Kurozawa ◽  
Douglas F. Barbin

Sign in / Sign up

Export Citation Format

Share Document