scholarly journals Robust CRISPR/Cas9 mediated genome editing and its application in manipulating plant height in the first generation of hexaploid Ma bamboo ( Dendrocalamus latiflorus Munro )

2020 ◽  
Vol 18 (7) ◽  
pp. 1501-1503 ◽  
Author(s):  
Shanwen Ye ◽  
Gang Chen ◽  
Markus V. Kohnen ◽  
Wenjia Wang ◽  
Changyang Cai ◽  
...  
Keyword(s):  
Genome Editing ◽  
Plant Height ◽  
First Generation ◽  
Dendrocalamus Latiflorus ◽  
Ma Bamboo

scholarly journals Phenotyping first-generation genome editing mutants: a new standard?

2017 ◽  
Vol 28 (7-8) ◽  
pp. 377-382 ◽  
Author(s):  
Lydia Teboul ◽  
Stephen A. Murray ◽  
Patrick M. Nolan
Keyword(s):  
Genome Editing ◽  
First Generation

scholarly journals Winter wheat (triticum aestivum l.) mutation depression under gamma-rays action

2021 ◽  
Author(s):  
M. Nazarenko ◽  
◽  
Y. Lykholat ◽  
V. Savosko ◽  
◽  
...  
Keyword(s):  
Winter Wheat ◽  
Plant Height ◽  
Gamma Rays ◽  
First Generation ◽  
Triticum Aestivum L ◽  
Pollen Sterility ◽  
Wheat Varieties ◽  
Research Fields ◽  
Yield Structure ◽  
Local Breeding

The purpose of our investigation was to identify the features of the depressive effects of the aftereffect of different doses of gamma-rays on winter wheat varieties of local breeding in terms of germination, survival, morphometry, yield. The parameters of germination and survival, the passage of the main phases of ontogenesis in winter wheat plants of French varieties (Courtiot and Gallixe) at the first generation were studied. The influence of mutagenic depression on parameters of yield structure (morphometry of mature plants) was established and the level of their variability was estimated too. In 2019 - 2020, experiments were conducted in the research fields of the research center of the Dnieper State Agrarian and Economic University. The experiments used seeds of Courtiot and Gallixe varieties, irradiated with gamma rays in doses of 100, 150, 200, 250, 300 Gy. Control was dry seeds. The variety Gallixe can be classified as resistant to gamma-rays, the variety Courtiotwas corresponded to high-sensitive. Parameter of germination and survival were directly correlated with increasing dose, with a dose of 200 Gy already semi-lethal, a dose of 250 Gy for variety Courtiot was sublethal, 300 Gy doze full-lethal, for the variety Gallixe sublethal was 300 Gy dose by which almost no plant material was obtained. Such parameters as plant height, weight of grain from the main spike and weight of thousand grains, partially (except for doses of 100-150 Gy) weight of grain from the plant reliably reproduce the mutagenic depression. Depression of the variety is affected by the dose of mutagen more than the genotype of the variety; the plant height parameter clearly demonstrates mutagenic depression. According to the results of factor and discriminant analysis as indicators affected by genotype-mutagenic interaction should be used germination and survival, pollen sterility, plant height, grain weight per spike, weight of thousand grains. Doses of 100 - 200 Gy are optimal for further use to obtain mutations; it is possible to use a dose of 250 Gy for the variety Gallixe.

scholarly journals First‐generation genome editing in potato using hairy root transformation

2020 ◽  
Vol 18 (11) ◽  
pp. 2201-2209 ◽  
Author(s):  
Nathaniel M. Butler ◽  
Shelley H. Jansky ◽  
Jiming Jiang
Keyword(s):  
Genome Editing ◽  
Hairy Root ◽  
First Generation ◽  
Root Transformation

scholarly journals Transgene-Free Genome Editing in Tomato and Potato Plants Using Agrobacterium-Mediated Delivery of a CRISPR/Cas9 Cytidine Base Editor

2019 ◽  
Vol 20 (2) ◽  
pp. 402 ◽  
Author(s):  
Florian Veillet ◽  
Laura Perrot ◽  
Laura Chauvin ◽  
Marie-Paule Kermarrec ◽  
Anouchka Guyon-Debast ◽  
...  
Keyword(s):  
Genome Editing ◽  
First Generation ◽  
Genome Engineering ◽  
Crop Improvement ◽  
Point Mutations ◽  
Acetolactate Synthase ◽  
Agrobacterium Mediated Transformation ◽  
Dicotyledonous Plants ◽  
Function Discovery ◽  
Vegetatively Propagated Plants

Genome editing tools have rapidly been adopted by plant scientists for gene function discovery and crop improvement. The current technical challenge is to efficiently induce precise and predictable targeted point mutations valuable for crop breeding purposes. Cytidine base editors (CBEs) are CRISPR/Cas9 derived tools recently developed to direct a C-to-T base conversion. Stable genomic integration of CRISPR/Cas9 components through Agrobacterium-mediated transformation is the most widely used approach in dicotyledonous plants. However, elimination of foreign DNA may be difficult to achieve, especially in vegetatively propagated plants. In this study, we targeted the acetolactate synthase (ALS) gene in tomato and potato by a CBE using Agrobacterium-mediated transformation. We successfully and efficiently edited the targeted cytidine bases, leading to chlorsulfuron-resistant plants with precise base edition efficiency up to 71% in tomato. More importantly, we produced 12.9% and 10% edited but transgene-free plants in the first generation in tomato and potato, respectively. Such an approach is expected to decrease deleterious effects due to the random integration of transgene(s) into the host genome. Our successful approach opens up new perspectives for genome engineering by the co-edition of the ALS with other gene(s), leading to transgene-free plants harboring new traits of interest.

scholarly journals Genome editing in plants using CRISPR type I-D nuclease

2020 ◽  
Vol 3 (1) ◽  
Author(s):  
Keishi Osakabe ◽  
Naoki Wada ◽  
Tomoko Miyaji ◽  
Emi Murakami ◽  
Kazuya Marui ◽  
...  
Keyword(s):  
Genome Editing ◽  
First Generation ◽  
Genome Engineering ◽  
Targeted Mutagenesis ◽  
Plant Genome ◽  
Type I ◽  
Crispr System ◽  
Target Dna ◽  
Short Indels

Abstract Genome editing in plants has advanced greatly by applying the clustered regularly interspaced short palindromic repeats (CRISPRs)-Cas system, especially CRISPR-Cas9. However, CRISPR type I—the most abundant CRISPR system in bacteria—has not been exploited for plant genome modification. In type I CRISPR-Cas systems, e.g., type I-E, Cas3 nucleases degrade the target DNA in mammals. Here, we present a type I-D (TiD) CRISPR-Cas genome editing system in plants. TiD lacks the Cas3 nuclease domain; instead, Cas10d is the functional nuclease in vivo. TiD was active in targeted mutagenesis of tomato genomic DNA. The mutations generated by TiD differed from those of CRISPR/Cas9; both bi-directional long-range deletions and short indels mutations were detected in tomato cells. Furthermore, TiD can be used to efficiently generate bi-allelic mutant plants in the first generation. These findings indicate that TiD is a unique CRISPR system that can be used for genome engineering in plants.

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