scholarly journals Ericoid mycorrhizal fungi and their genomes: another side to the mycorrhizal symbiosis?

2018 ◽  
Vol 220 (4) ◽  
pp. 1141-1147 ◽  
Author(s):  
Silvia Perotto ◽  
Stefania Daghino ◽  
Elena Martino
Keyword(s):  
Mycorrhizal Fungi ◽  
Mycorrhizal Symbiosis ◽  
Ericoid Mycorrhizal Fungi

Isolation and identification of hydroxamate siderophores of ericoid mycorrhizal fungi

BioMetals ◽  
1992 ◽  
Vol 5 (1) ◽  
pp. 51-56 ◽  
Author(s):  
Kurt Haselwandter ◽  
Barbara Dobernigg ◽  
Werner Beck ◽  
G�nther Jung ◽  
Alexander Cansier ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Isolation And Identification ◽  
Ericoid Mycorrhizal Fungi ◽  
Hydroxamate Siderophores

Deciphering the Chitin Code in Plant Symbiosis, Defense, and Microbial Networks

2021 ◽  
Vol 75 (1) ◽  
pp. 583-607
Author(s):  
Devanshi Khokhani ◽  
Cristobal Carrera Carriel ◽  
Shivangi Vayla ◽  
Thomas B. Irving ◽  
Christina Stonoha-Arther ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Growth And Development ◽  
Fungal Growth ◽  
Mycorrhizal Symbiosis ◽  
Signal Molecules ◽  
Symbiotic Relationship ◽  
Beneficial Microbes ◽  
Symbiotic Interactions ◽  
Microbe Interactions ◽  
Structural Polymer

Chitin is a structural polymer in many eukaryotes. Many organisms can degrade chitin to defend against chitinous pathogens or use chitin oligomers as food. Beneficial microorganisms like nitrogen-fixing symbiotic rhizobia and mycorrhizal fungi produce chitin-based signal molecules called lipo-chitooligosaccharides (LCOs) and short chitin oligomers to initiate a symbiotic relationship with their compatible hosts and exchange nutrients. A recent study revealed that a broad range of fungi produce LCOs and chitooligosaccharides (COs), suggesting that these signaling molecules are not limited to beneficial microbes. The fungal LCOs also affect fungal growth and development, indicating that the roles of LCOs beyond symbiosis and LCO production may predate mycorrhizal symbiosis. This review describes the diverse structures of chitin; their perception by eukaryotes and prokaryotes; and their roles in symbiotic interactions, defense, and microbe-microbe interactions. We also discuss potential strategies of fungi to synthesize LCOs and their roles in fungi with different lifestyles.

scholarly journals Dual RNA-seq reveals large-scale non-conserved genotype x genotype specific genetic reprograming and molecular crosstalk in the mycorrhizal symbiosis

2018 ◽  
Author(s):  
Ivan D. Mateus ◽  
Frédéric G. Masclaux ◽  
Consolée Aletti ◽  
Edward C. Rojas ◽  
Romain Savary ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Large Scale ◽  
Molecular Mechanisms ◽  
Arbuscular Mycorrhizal ◽  
Mycorrhizal Symbiosis ◽  
Rna Seq ◽  
Plant Host ◽  
Transcriptional Responses ◽  
Plant Genes ◽  
Fungal Genetic

AbstractArbuscular mycorrhizal fungi (AMF) impact plant growth and are a major driver of plant diversity and productivity. We quantified the contribution of intra-specific genetic variability in cassava (Manihot esculenta) and Rhizophagus irregularis to gene reprogramming in symbioses using dual RNA-sequencing. A large number of cassava genes exhibited altered transcriptional responses to the fungus but transcription of most of these plant genes (72%) responded in a different direction or magnitude depending on the plant genotype. Two AMF isolates displayed large differences in their transcription, but the direction and magnitude of the transcriptional responses for a large number of these genes was also strongly influenced by the genotype of the plant host. This indicates that unlike the highly conserved plant genes necessary for the symbiosis establishment, plant and fungal gene transcriptional responses are not conserved and are greatly influenced by plant and fungal genetic differences, even at the within-species level. The transcriptional variability detected allowed us to identify an extensive gene network showing the interplay in plant-fungal reprogramming in the symbiosis. Key genes illustrated that the two organisms jointly program their cytoskeleton organisation during growth of the fungus inside roots. Our study reveals that plant and fungal genetic variation plays a strong role in shaping the genetic reprograming in response to symbiosis, indicating considerable genotype x genotype interactions in the mycorrhizal symbiosis. Such variation needs to be considered in order to understand the molecular mechanisms between AMF and their plant hosts in natural communities.

scholarly journals Ericoid mycorrhizal diversity increases with soil age and progressive phosphorus limitation across a 4.1 million-year chronosequence

2020 ◽  
Author(s):  
Devin R. Leopold ◽  
Kabir G. Peay ◽  
Peter M. Vitousek ◽  
Tadashi Fukami
Keyword(s):  
Species Composition ◽  
Nutrient Limitation ◽  
Mycorrhizal Fungi ◽  
Fungal Diversity ◽  
Species Turnover ◽  
Phosphorus Limitation ◽  
Fungal Species ◽  
Direct Role ◽  
Ericoid Mycorrhizal Fungi ◽  
Soil Age

AbstractEricaceous plants rely on ericoid mycorrhizal fungi for nutrient acquisition. However, the factors that affect the composition and structure of these fungal communities remain largely unknown. Here, we use a 4.1-myr soil chronosequence in Hawaii to test the hypothesis that changes in nutrient availability with soil age determine the diversity and species composition of fungi associated with ericoid roots. We sampled roots of a native Hawaiian plant, Vaccinium calycinum, and used DNA metabarcoding to quantify changes in fungal diversity and species composition. We also used a fertilization experiment at the youngest and oldest sites to assess the importance of nutrient limitation. We found an increase in diversity and a clear pattern of species turnover across the chronosequence, driven largely by putative ericoid mycorrhizal fungi. Fertilization with nitrogen at the youngest site and phosphorus at the oldest site reduced total fungal diversity, suggesting a direct role of nutrient limitation. Our results also reveal the presence of novel fungal species associated with Hawaiian Ericaceae and suggest a greater importance of phosphorus availability for communities of ericoid mycorrhizal fungi than is generally assumed.

scholarly journals The Mycorrhizal Tragedy of the Commons

2021 ◽  
Author(s):  
Nils Henriksson ◽  
Oskar Franklin ◽  
Lasse Tarvainen ◽  
John Marshall ◽  
Judith Lundberg-Felten ◽  
...  
Keyword(s):  
Mycorrhizal Fungi ◽  
Boreal Forests ◽  
Nitrogen Availability ◽  
Carbon Allocation ◽  
Tragedy Of The Commons ◽  
Nitrogen Immobilization ◽  
Mycorrhizal Symbiosis ◽  
Individual Tree ◽  
Carbon Supply ◽  
The Commons

The mycorrhizal symbiosis is ubiquitous in boreal forests. Trees and plants provide their fungal partners with photosynthetic carbon in exchange for soil nutrients like nitrogen, which is critical to the growth and survival of the plants. But plant carbon allocation to mycorrhizal symbionts can also fuel nitrogen immobilization, hampering tree growth. Here we present results from field and greenhouse experiments combined with mathematical modelling, showing that mycorrhizal fungi can be simultaneously mutualistic to an individual tree and parasitic to the networked community of trees. Mycorrhizal networks connect multiple plants and fungi, and we show that each tree gains additional nitrogen at the expense of its neighbors by supplying more carbon to the fungi. But this additional carbon supply eventually aggravates nitrogen immobilization in the shared fungal biomass. Individual trees may thus independently benefit from increasing their carbon investment to mycorrhiza, while causing a decline in nitrogen availability for the whole plant community. We illustrate the evolutionary underpinnings of this situation by drawing on the analogous the tragedy of the commons, and explain how rising atmospheric CO2 may lead to greater nitrogen immobilization in the future.

Phylogenomics of orchids and their mycorrhizal fungi : trees, diversity, and the pursuit of symbiosis

2019 ◽  
Author(s):  
◽  
Sarah Unruh
Keyword(s):  
Mycorrhizal Fungi ◽  
Phylogenetic Trees ◽  
High Throughput Sequencing ◽  
Genomic Sequence ◽  
Sequence Data ◽  
Mycorrhizal Symbiosis ◽  
Sequencing Data ◽  
Phylogenetic Structure ◽  
University Of Missouri ◽  
Fungal Symbiosis

[ACCESS RESTRICTED TO THE UNIVERSITY OF MISSOURI AT REQUEST OF AUTHOR.] Phylogenetic trees show us how organisms are related and provide frameworks for studying and testing evolutionary hypotheses. To better understand the evolution of orchids and their mycorrhizal fungi, I used high-throughput sequencing data and bioinformatic analyses, to build phylogenetic hypotheses. In Chapter 2, I used transcriptome sequences to both build a phylogeny of the slipper orchid genera and to confirm the placement of a polyploidy event at the base of the orchid family. Polyploidy is hypothesized to be a strong driver of evolution and a source of unique traits so confirming this event leads us closer to explaining extant orchid diversity. The list of orthologous genes generated from this study will provide a less expensive and more powerful method for researchers examining the evolutionary relationships in Orchidaceae. In Chapter 3, I generated genomic sequence data for 32 fungal isolates that were collected from orchids across North America. I inferred the first multi-locus nuclear phylogenetic tree for these fungal clades. The phylogenetic structure of these fungi will improve the taxonomy of these clades by providing evidence for new species and for revising problematic species designations. A robust taxonomy is necessary for studying the role of fungi in the orchid mycorrhizal symbiosis. In chapter 4 I summarize my work and outline the future directions of my lab at Illinois College including addressing the remaining aims of my Community Sequencing Proposal with the Joint Genome Institute by analyzing the 15 fungal reference genomes I generated during my PhD. Together these chapters are the start of a life-long research project into the evolution and function of the orchid/fungal symbiosis.

scholarly journals Synergy of arbuscular mycorrhizal symbiosis and exogenous Ca2+ benefits peanut (Arachis hypogaea L.) growth through the shared hormone and flavonoid pathway

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Li Cui ◽  
Feng Guo ◽  
Jialei Zhang ◽  
Sha Yang ◽  
JingJing Meng ◽  
...  
Keyword(s):  
Arachis Hypogaea ◽  
Mycorrhizal Fungi ◽  
Differentially Expressed Gene ◽  
Sufficient Conditions ◽  
Arbuscular Mycorrhizal ◽  
Mycorrhizal Symbiosis ◽  
Marker Genes ◽  
Specific Marker ◽  
Flavonoid Pathway ◽  
Am Symbiosis

Abstract Peanut yield is severely affected by exchangeable calcium ion (Ca2+) deficiency in the soil. Arbuscular mycorrhizal (AM) symbiosis increases the absorption of Ca2+ for host plants. Here, we analyzed the physiological and transcriptional changes in the roots of Arachis hypogaea L. colonized by Funneliformismosseae under Ca2+-deficient and -sufficient conditions. The results showed that exogenous Ca2+ application increased arbuscular mycorrhizal fungi (AMF) colonization, plant dry weight, and Ca content of AM plants. Simultaneously, transcriptome analysis showed that Ca2+ application further induced 74.5% of differentially expressed gene transcripts in roots of AM peanut seedlings. These genes are involved in AM symbiosis development, hormone biosynthesis and signal transduction, and carotenoid and flavonoid biosynthesis. The transcripts of AM-specific marker genes in AM plants with Ca2+ deprivation were further up-regulated by Ca2+ application. Gibberellic acid (GA3) and flavonoid contents were higher in roots of AM- and Ca2+-treated plants, but salicylic acid (SA) and carotenoid contents specifically increased in roots of the AM plants. Thus, these results suggest that the synergy of AM symbiosis and Ca2+ improves plant growth due to the shared GA- and flavonoid-mediated pathway, whereas SA and carotenoid biosynthesis in peanut roots are specific to AM symbiosis.

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