Genome-wide analysis and endo-β-mannanase gene family expression profiling of tomato and soybean

2018 ◽  
Vol 36 (6) ◽  
pp. njb-01580 ◽  
Author(s):  
Xiuling Chen ◽  
Changjiang Jin ◽  
Peiwen Wang ◽  
Kai Chen ◽  
Xiaoxuan Zhang ◽  
...  
2018 ◽  
Vol 44 (2) ◽  
pp. 197
Author(s):  
Li ZHANG ◽  
Hong-Ju JIAN ◽  
Bo YANG ◽  
Ao-Xiang ZHANG ◽  
Chao ZHANG ◽  
...  

BMC Genomics ◽  
2015 ◽  
Vol 16 (1) ◽  
Author(s):  
Yongqin Wang ◽  
Chenglin Chai ◽  
Babu Valliyodan ◽  
Christine Maupin ◽  
Brad Annen ◽  
...  

PLoS ONE ◽  
2015 ◽  
Vol 10 (9) ◽  
pp. e0138467 ◽  
Author(s):  
Fawei Wang ◽  
Yu Deng ◽  
Yonggang Zhou ◽  
Jinye Dong ◽  
Huan Chen ◽  
...  

2021 ◽  
Author(s):  
Hongying Yu ◽  
Yaying Ma ◽  
Yijing Lu ◽  
Jingjing Yue ◽  
Ray Ming

Abstract DNA-binding with one finger (Dof) transcription factors are plant-specific transcription factors involved in numerous pathways of plant development, especially in respond to abiotic stresses. Although genome-wide analysis of this gene family has been performed in many species, Dof genes in spinach have not been thoroughly analyzed. We performed a genome-wide analysis and characterization of Dof gene family in spinach. Twenty two Dof genes were identified and classified into four groups with nine subgroups, which was further corroborated by gene structure and motif analyses. Ka/Ks analysis revealed that SoDofs were subjected to purify selection. Using Cis-acting elements analysis, SoDofs were involved in plant growth and development, plant hormones and stress responses. Expression profiling demonstrated that SoDofs expressed in leaf and inflorescence, and responded to cold, heat, and drought stresses. SoDof22 expressed the highest level in male flowers and under cold stress. These results provided a genome-wide analysis of SoDof genes, their gender- and tissue-specific expression, and response to abiotic stresses. The knowledge and resources gained from these analyses will benefit spinach improvement.


PLoS ONE ◽  
2014 ◽  
Vol 9 (2) ◽  
pp. e87156 ◽  
Author(s):  
Xue Chen ◽  
Zhu Chen ◽  
Hualin Zhao ◽  
Yang Zhao ◽  
Beijiu Cheng ◽  
...  

PLoS ONE ◽  
2015 ◽  
Vol 10 (3) ◽  
pp. e0119198 ◽  
Author(s):  
Annapurna Bhattacharjee ◽  
Rajesh Ghangal ◽  
Rohini Garg ◽  
Mukesh Jain

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