scholarly journals YabA and DnaD inhibit helix assembly of the DNA replication initiation protein DnaA

2013 ◽  
pp. n/a-n/a ◽  
Author(s):  
Graham Scholefield ◽  
Heath Murray
Keyword(s):  
Dna Replication ◽  
Replication Initiation ◽  
Replication Initiation Protein ◽  
Dna Replication Initiation

A Novel Fluorescence-Based Screen for Inhibitors of the Initiation of DNA Replication in Bacteria

2019 ◽  
Vol 16 (3) ◽  
pp. 272-277 ◽  
Author(s):  
Rasmus N. Klitgaard ◽  
Anders Løbner-Olesen
Keyword(s):  
Dna Replication ◽  
High Throughput ◽  
Cyclic Peptide ◽  
Replication Initiation ◽  
False Positive Result ◽  
Over Expression ◽  
Initiator Protein ◽  
Dna Replication Initiation ◽  
Cellular Processes ◽  
Initiation Of Dna Replication

Background:One of many strategies to overcome antibiotic resistance is the discovery of compounds targeting cellular processes, which have not yet been exploited.Materials and Methods:Using various genetic tools, we constructed a novel high throughput, cellbased, fluorescence screen for inhibitors of chromosome replication initiation in bacteria.Results:The screen was validated by expression of an intra-cellular cyclic peptide interfering with the initiator protein DnaA and by over-expression of the negative initiation regulator SeqA. We also demonstrated that neither tetracycline nor ciprofloxacin triggers a false positive result. Finally, 400 extracts isolated mainly from filamentous actinomycetes were subjected to the screen.Conclusion:We concluded that the presented screen is applicable for identifying putative inhibitors of DNA replication initiation in a high throughput setup.

scholarly journals Archaeal Orc1 protein interacts with T-rich single-stranded DNA

2021 ◽  
Vol 14 (1) ◽  
Author(s):  
Katarzyna Wegrzyn ◽  
Igor Konieczny
Keyword(s):  
Dna Replication ◽  
Replication Initiation ◽  
Single Stranded Dna ◽  
Dna Replication Initiation ◽  
Double Stranded Dna ◽  
Nucleoprotein Complexes ◽  
Eukaryotic Organisms ◽  
Replication Initiation Proteins ◽  
Hydrolysis Of ◽  
Replication Activity

Abstract Objective The ability to form nucleoprotein complexes is a fundamental activity of DNA replication initiation proteins. They bind within or nearby the region of replication origin what results in melting of a double-stranded DNA (dsDNA) and formation of single-stranded DNA (ssDNA) region where the replication machinery can assemble. For prokaryotic initiators it was shown that they interact with the formed ssDNA and that this interaction is required for the replication activity. The ability to interact with ssDNA was also shown for Saccharomyces cerevisiae replication initiation protein complex ORC. For Archaea, which combine features of both prokaryotic and eukaryotic organisms, there was no evidence whether DNA replication initiators can interact with ssDNA. We address this issue in this study. Results Using purified Orc1 protein from Aeropyrum pernix (ApOrc1) we analyzed its ability to interact with ssDNA containing sequence of an AT-rich region of the A. pernix origin Ori1 as well as with homopolymers of thymidine (polyT) and adenosine (polyA). The Bio-layer interferometry, surface plasmon resonance and microscale thermophoresis showed that the ApOrc1 can interact with ssDNA and it binds preferentially to T-rich ssDNA. The hydrolysis of ATP is not required for this interaction.

scholarly journals DNA Content and Nucleoid Distribution in Methanothermobacter thermautotrophicus

2005 ◽  
Vol 187 (5) ◽  
pp. 1856-1858 ◽  
Author(s):  
Alan I. Majerník ◽  
Magnus Lundgren ◽  
Paul McDermott ◽  
Rolf Bernander ◽  
James P. J. Chong
Keyword(s):  
Flow Cytometry ◽  
Dna Replication ◽  
Chromosome Segregation ◽  
Dna Content ◽  
Replication Initiation ◽  
Epifluorescence Microscopy ◽  
Single Chromosome ◽  
Dna Replication Initiation ◽  
Methanothermobacter Thermautotrophicus ◽  
Multiple Cells

ABSTRACT Flow cytometry and epifluorescence microscopy results for the euryarchaeon Methanothermobacter thermautotrophicus were consistent with filaments containing multiple cells. Filaments of one to four cells contained two to eight nucleoids. Single chromosome-containing cells were not observed. Filaments containing multiple genome copies displayed synchronous DNA replication initiation. Chromosome segregation occurred during replication or rapidly after replication termination.

scholarly journals DNA Replication Initiation Studied at the Single Molecule Level

2013 ◽  
Vol 104 (2) ◽  
pp. 74a
Author(s):  
Hsin-Mei Cheng ◽  
Philip Gröger ◽  
Andreas Hartmann ◽  
Elena M. Seco ◽  
Silvia Ayora ◽  
...  
Keyword(s):  
Dna Replication ◽  
Single Molecule ◽  
Replication Initiation ◽  
Single Molecule Level ◽  
Dna Replication Initiation

scholarly journals Nutritional Control of DNA Replication Initiation through the Proteolysis and Regulated Translation of DnaA

PLoS Genetics ◽  
2015 ◽  
Vol 11 (7) ◽  
pp. e1005342 ◽  
Author(s):  
David J. Leslie ◽  
Christian Heinen ◽  
Frederic D. Schramm ◽  
Marietta Thüring ◽  
Christopher D. Aakre ◽  
...  
Keyword(s):  
Dna Replication ◽  
Replication Initiation ◽  
Dna Replication Initiation
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