scholarly journals The genetic architecture of target‐site resistance to pyrethroid insecticides in the African malaria vectors Anopheles gambiae and Anopheles coluzzii

2021 ◽  
Author(s):  
Chris S. Clarkson ◽  
Alistair Miles ◽  
Nicholas J. Harding ◽  
Andrias O. O’Reilly ◽  
David Weetman ◽  
...  
Keyword(s):  
Anopheles Gambiae ◽  
Genetic Architecture ◽  
Target Site ◽  
Malaria Vectors ◽  
Anopheles Coluzzii ◽  
Pyrethroid Insecticides ◽  
Target Site Resistance

scholarly journals The genetic architecture of target-site resistance to pyrethroid insecticides in the African malaria vectors Anopheles gambiae and Anopheles coluzzii

2018 ◽  
Author(s):  
Chris S. Clarkson ◽  
Alistair Miles ◽  
Nicholas J. Harding ◽  
David Weetman ◽  
Dominic Kwiatkowski ◽  
...  
Keyword(s):  
Insecticide Resistance ◽  
Positive Selection ◽  
Anopheles Gambiae ◽  
Pyrethroid Resistance ◽  
Target Site ◽  
Malaria Vectors ◽  
Anopheles Coluzzii ◽  
Resistance Allele ◽  
Pyrethroid Insecticides ◽  
Recent Positive Selection

AbstractResistance to pyrethroid insecticides is a major concern for malaria vector control, because these are the compounds used in almost all insecticide-treated bed-nets (ITNs), and are also widely used for indoor residual spraying (IRS). Pyrethroids target the voltage-gated sodium channel (VGSC), an essential component of the mosquito nervous system, but substitutions in the amino acid sequence can disrupt the activity of these insecticides, inducing a resistance phenotype. Here we use Illumina whole-genome sequence data from phase 1 of the Anopheles gambiae 1000 Genomes Project (Ag1000G) to provide a comprehensive account of genetic variation in the Vgsc gene in mosquito populations from eight African countries. In addition to the three known resistance alleles, we describe 20 non-synonymous nucleotide substitutions at appreciable frequency in one or more populations that are previously unknown in Anopheles mosquitoes. Thirteen of these novel alleles were found to occur almost exclusively on haplotypes carrying the known L995F resistance allele (L1014F in Musca domesticus codon numbering), and may enhance or compensate for the L995F resistance pheno-type. A novel mutation I1527T, which is adjacent to a predicted pyrethroid binding site, was found in tight linkage with either of two alleles causing a V402L substitution, similar to a combination of substitutions found to cause pyrethroid resistance in several other insect species. We analyse the genetic backgrounds on which non-synonymous alleles are found, to determine which alleles have experienced recent positive selection, and to refine our understanding of the spread of resistance between species and geographical locations. We describe twelve distinct haplotype groups with evidence of recent positive selection, five of which carry the known L995F resistance allele, five of which carry the known L995S resistance allele, one of which carries the novel I1527T allele, and one of which carries a novel M490I allele. Seven of these groups are localised to a single geographical location, and five comprise haplotypes from different countries, in one case separated by over 3000 km, providing new information about the geographical distribution and spread of resistance. We also find evidence for multiple introgression events transmitting resistance alleles between An. gambiae and An. coluzzii. We identify markers that could be used to design high-throughput, low-cost genetic assays for improved surveillance of pyrethroid resistance in the field. Our results demonstrate that the molecular basis of target-site pyrethroid resistance in malaria vectors is more complex than previously appreciated, and provide a foundation for the development of new genetic tools to track the spread insecticide resistance and improve the design of strategies for insecticide resistance management.

scholarly journals Anopheles gambiae Genome Conservation as a Resource for Rational Gene Drive Target Site Selection

Insects ◽  
2021 ◽  
Vol 12 (2) ◽  
pp. 97
Author(s):  
Nace Kranjc ◽  
Andrea Crisanti ◽  
Tony Nolan ◽  
Federica Bernardini
Keyword(s):  
Anopheles Gambiae ◽  
Data Storage ◽  
Genomic Variation ◽  
Malaria Vectors ◽  
Anopheles Coluzzii ◽  
Structural Constraints ◽  
Gene Drive ◽  
Genetic Traits ◽  
A Genome ◽  
Insight Into

The increase in molecular tools for the genetic engineering of insect pests and disease vectors, such as Anopheles mosquitoes that transmit malaria, has led to an unprecedented investigation of the genomic landscape of these organisms. The understanding of genome variability in wild mosquito populations is of primary importance for vector control strategies. This is particularly the case for gene drive systems, which look to introduce genetic traits into a population by targeting specific genomic regions. Gene drive targets with functional or structural constraints are highly desirable as they are less likely to tolerate mutations that prevent targeting by the gene drive and consequent failure of the technology. In this study we describe a bioinformatic pipeline that allows the analysis of whole genome data for the identification of highly conserved regions that can point at potential functional or structural constraints. The analysis was conducted across the genomes of 22 insect species separated by more than hundred million years of evolution and includes the observed genomic variation within field caught samples of Anopheles gambiae and Anopheles coluzzii, the two most dominant malaria vectors. This study offers insight into the level of conservation at a genome-wide scale as well as at per base-pair resolution. The results of this analysis are gathered in a data storage system that allows for flexible extraction and bioinformatic manipulation. Furthermore, it represents a valuable resource that could provide insight into population structure and dynamics of the species in the complex and benefit the development and implementation of genetic strategies to tackle malaria.

scholarly journals Phenotypic Insecticide Resistance in Anopheles gambiae (Diptera: Culicidae): Specific Characterization of Underlying Resistance Mechanisms Still Matters

2020 ◽  
Author(s):  
Adandé A Medjigbodo ◽  
Luc S Djogbenou ◽  
Aubin A Koumba ◽  
Laurette Djossou ◽  
Athanase Badolo ◽  
...  
Keyword(s):  
Insecticide Resistance ◽  
Anopheles Gambiae ◽  
Resistance Mechanisms ◽  
Malaria Vectors ◽  
Effective Control ◽  
Anopheles Coluzzii ◽  
Anopheles Gambiae S.S ◽  
Diagnostic Dose ◽  
Pirimiphos Methyl ◽  
Old Adult

Abstract An effective control of malaria vectors requires an extensive knowledge of mechanisms underlying the resistance-phenotypes developed by these vectors against insecticides. We investigated Anopheles gambiae mosquitoes from Benin and Togo for their intensity of insecticide resistance and we discussed the involvement of genotyped mechanisms in the resistance-phenotypes observed. Three- to five-day-old adult mosquitoes emerged from field and laboratory An. gambiae larvae were assayed using WHO tube intensity tests against various doses of deltamethrin: 1× (0.05%); 2× (0.1%); 5× (0.25%); 7.5× (0.375%) and those of pirimiphos-methyl: 0.5× (0.125%); 1× (0.25%). Members of An. gambiae complex were screened in field populations using polymerase chain reaction (PCR) assays. The presence of kdrR(1014F/1014S) and ace-1R(119S) mutations was also investigated using TaqMan and PCR-RFLP techniques, respectively. Anopheles gambiae from field were very resistant to deltamethrin, whereas KisKdr and AcerKdrKis strains displayed 100% mortality rates at 2× the diagnostic dose. In contrast, the field mosquitoes displayed a low resistance-intensity against 1× the diagnostic dose of pirimiphos-methyl, whereas AcerKis and AcerKdrKis strains showed susceptibility at 0.5× the diagnostic dose. Anopheles gambiae s.s., Anopheles coluzzii, and Anopheles arabiensis were identified. Allelic frequencies of kdrR (1014F) and ace-1R (119S) mutations in the field populations varied from 0.65 to 1 and 0 to 0.84, respectively. The field An. gambiae displayed high-resistance levels against deltamethrin and pirimiphos-methyl when compared with those of the laboratory An. gambiae-resistant strains. These results exhibit the complexity of underlying insecticide resistance mechanisms in these field malaria vectors.

scholarly journals Rapid high throughput SYBR green assay for identifying the malaria vectors Anopheles arabiensis, Anopheles coluzzii and Anopheles gambiae s.s. Giles

PLoS ONE ◽  
2019 ◽  
Vol 14 (4) ◽  
pp. e0215669 ◽  
Author(s):  
Joseph Chabi ◽  
Arjen Van’t Hof ◽  
Louis K. N’dri ◽  
Alex Datsomor ◽  
Dora Okyere ◽  
...  
Keyword(s):  
Anopheles Gambiae ◽  
High Throughput ◽  
Anopheles Arabiensis ◽  
Sybr Green ◽  
Malaria Vectors ◽  
Anopheles Coluzzii ◽  
Anopheles Gambiae S.S ◽  
Sybr Green Assay

scholarly journals Effect of bendiocarb based (Ficam® 80% WP) Indoor Residual Spraying on feeding patterns from malaria vectors in Burkina Faso, West Africa.

2020 ◽  
Author(s):  
Sawdetuo Aristide HIEN ◽  
Dieudonné Diloma Soma ◽  
Simon Pengwende Sawadogo ◽  
Serge Bèwadéyir Poda ◽  
Moussa Namountougou ◽  
...  
Keyword(s):  
Burkina Faso ◽  
Anopheles Gambiae ◽  
Malaria Transmission ◽  
Malaria Vector ◽  
Indoor Residual Spraying ◽  
Transmission Risk ◽  
Malaria Vectors ◽  
Anopheles Coluzzii ◽  
Transmission Season ◽  
Density Methods

Abstract Background The fight against vector is essential in malaria prevention strategies in several endemic countries in Africa. In Burkina Faso, malaria transmission is seasonal in most parts of country, so a single round of spraying should provide effective protection against malaria, provided the insecticide remains effective over the entire malaria transmission season. The outcomes of indoor residual spraying towards curtailing malaria transmission are firstly to decrease the life span of vector mosquitoes and also to reduce the malaria vectors density. Methods CDC light trap and early morning collections by pyrethrum spray catches were performed monthly to determine the change in malaria vector indices in sprayed (Diebougou) and unsprayed sites (Dano). The female’s malaria vectors collected by both methods were used to determine their blood feeding, biting and sporozoites rate and malaria transmission risk estimated by entomological inoculation rate. Results Anopheles gambiae complex composed to Anopheles gambiae, Anopheles coluzzii and Anopheles arabiensis were present throughout the transmission season, but An. gambiae was the predominant species collected (P =0.0005), comprising 88% of the total collected and the most infected species. Malaria vectors densities were significantly lower in sprayed villages (n=4,303) compared with unsprayed villages (n=12,569) during post-spraying period (P = 0.0012). In addition, mean human biting rate of An. gambiae sl and An . funestus ss were significantly lower in sprayed areas compared to unsprayed areas (P<0.05). Overall, malaria vector transmission risk was significant lower in villages which received IRS (P=0.0001) whatever the malaria vectors species ( An. gambiae sl and An. funestus ss). Conclusions The results showed that in the sprayed area (Diebougou), vector densities, human biting rates and malaria transmission risks were very lower than unsprayed areas (Dano). The findings also showed a change in vector behavior especially within An. funestus which became more zoophagic following IRS. The indoor residual spraying could be recommanded as control tool in areas where malaria transmission occured a given period of year.

scholarly journals Identification of a rapidly-spreading triple mutant for high-level metabolic insecticide resistance in Anopheles gambiae provides a real-time molecular diagnostic for anti-malarial intervention deployment

2021 ◽  
Author(s):  
Harun Njoroge ◽  
Arjen van’t Hof ◽  
Ambrose Oruni ◽  
Dimitra Pipini ◽  
Sanjay C. Nagi ◽  
...  
Keyword(s):  
Insecticide Resistance ◽  
Anopheles Gambiae ◽  
Pyrethroid Resistance ◽  
Border Region ◽  
Malaria Vectors ◽  
Molecular Diagnostic ◽  
Triple Mutant ◽  
Pyrethroid Insecticides ◽  
High Level ◽  
Mutant Haplotype

AbstractInsecticide resistance provides both an increasingly pressing threat to the control of vector-borne diseases and insights into the remarkable capacity of natural populations to show rapid evolutionary responses to contemporary selection. Malaria control remains heavily dependent on deployment of pyrethroid insecticides, primarily in long lasting insecticidal nets (LLINs), but resistance in the major malaria vectors has increased over the last 15 years in concert with dramatic expansion of LLIN distributions. Identifying genetic mechanisms underlying high-level resistance in mosquitoes, which may almost entirely overcome pyrethroid efficacy, is crucial for the development and deployment of potentially resistance-breaking tools. Using the Anopheles gambiae 1000 genomes (Ag1000g) data we identified a very recent selective sweep in mosquitoes from Uganda which localized to a cluster of cytochrome P450 genes, including some commonly implicated in resistance. Further interrogation revealed a haplotype involving a trio of mutations, a nonsynonymous point mutation in Cyp6p4 (I236M), an upstream insertion of a partial Zanzibar-like transposable element (TE) and a duplication of the Cyp6aa1 gene. The mutations appear to have originated recently in An. gambiae from the Kenya-Uganda border region around Lake Victoria, with stepwise replacement of the double-mutant (Zanzibar-like TE and Cyp6p4-236M) with the triple-mutant haplotype (including Cyp6aa1 duplication), which has spread into the Democratic Republic of Congo and Tanzania. The triple-mutant haplotype is strongly associated with increased expression of genes able to metabolise pyrethroids and is strongly predictive of resistance to pyrethroids most notably deltamethrin, a commonly-used LLIN insecticide. Importantly, there was increased mortality in mosquitoes carrying the triple-mutation when exposed to nets co-treated with the synergist piperonyl butoxide (PBO). Frequencies of the triple-mutant haplotype remain spatially variable within countries, suggesting an effective marker system to guide deployment decisions for limited supplies of PBO-pyrethroid co-treated LLINs across African countries. Duplications of the Cyp6aa1 gene are common in An. gambiae across Africa and, given the enzymes metabolic activity, are likely to be a useful diagnostic for high levels of pyrethroid resistance.

High Levels of Knockdown Resistance in Anopheles coluzzii and Anopheles gambiae (Diptera: Culicidae), Major Malaria Vectors in Togo, West Africa: A 2011 Monitoring Report

2019 ◽  
Vol 56 (4) ◽  
pp. 1159-1164
Author(s):  
Koffi Mensah Ahadji-Dabla ◽  
Adjovi Djifa Amoudji ◽  
Seth Wolali Nyamador ◽  
Georges Yawo Apétogbo ◽  
Joseph Chabi ◽  
...  
Keyword(s):  
West Africa ◽  
Anopheles Gambiae ◽  
National Malaria Control Programme ◽  
Control Programme ◽  
World Health ◽  
Malaria Vectors ◽  
Malaria Control Programme ◽  
Anopheles Coluzzii ◽  
Knockdown Resistance ◽  
Anopheles Gambiae S.S

Abstract A survey of susceptibility to DDT, deltamethrin, bendiocarb, and chlorpyrifos-methyl was conducted in five localities in 2011 in Togo, West Africa, to assess the insecticide resistance status of Anopheles gambiae s.l. (Diptera: Culicidae). Female populations of An. gambaie s.l. emerged from collected larvae (F0) were exposed to insecticide-impregnated papers using World Health Organization test kits for adult mosquitoes; the susceptible reference strain Kisumu was used as a control. Resistance to DDT and deltamethrin was observed within the mosquito populations tested. Anopheles gambiae s.s. and Anopheles coluzzii represented the only species recorded in the study sites. The frequency of knockdown resistance (kdr L1014F) mutation determined using polymerase chain reaction diagnostic tests was lower in An. gambiae than in An. coluzzii in all of the localities except Kolokopé. Further investigations of An. gambiae s.l. resistance are needed in Togo to help the National Malaria Control Programme in vector control decision making and implementation of resistance management strategy.

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