Genome‐wide identification and transcriptome‐based expression profiling of the Sox gene family in the spinyhead croaker ( Collichthys lucidus )

2021 ◽  
Author(s):  
Fujiang Liu ◽  
Li Zhou ◽  
Jing Zhang ◽  
Yilei Wang ◽  
Zhiyong Wang ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Profiling ◽  
Genome Wide ◽  
Sox Gene ◽  
Collichthys Lucidus

Genome-wide identification and expression profiling of the SOX gene family in a bivalve mollusc Patinopecten yessoensis

Gene ◽  
2017 ◽  
Vol 627 ◽  
pp. 530-537 ◽  
Author(s):  
Jiachen Yu ◽  
Lingling Zhang ◽  
Yangping Li ◽  
Ruojiao Li ◽  
Meiwei Zhang ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Profiling ◽  
Bivalve Mollusc ◽  
Patinopecten Yessoensis ◽  
Genome Wide ◽  
Sox Gene

Genome-wide Analysis and Expression Profiling of SPS Gene Family in Brassica nupus L.

2018 ◽  
Vol 44 (2) ◽  
pp. 197
Author(s):  
Li ZHANG ◽  
Hong-Ju JIAN ◽  
Bo YANG ◽  
Ao-Xiang ZHANG ◽  
Chao ZHANG ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Profiling ◽  
Genome Wide Analysis ◽  
Genome Wide

scholarly journals Genome-Wide Identification and Expression Profiling of the PDI Gene Family Reveals Their Probable Involvement in Abiotic Stress Tolerance in Tomato (Solanum lycopersicum L.)

Genes ◽  
2020 ◽  
Vol 12 (1) ◽  
pp. 23
Author(s):  
Antt Htet Wai ◽  
Muhammad Waseem ◽  
A B M Mahbub Morshed Khan ◽  
Ujjal Kumar Nath ◽  
Do Jin Lee ◽  
...  
Keyword(s):  
Abiotic Stress ◽  
Gene Family ◽  
Stress Tolerance ◽  
Solanum Lycopersicum ◽  
Expression Profiling ◽  
Abiotic Stress Tolerance ◽  
Dependent Manner ◽  
Solanum Lycopersicum L ◽  
Genome Wide ◽  
Protein Disulfide

Protein disulfide isomerases (PDI) and PDI-like proteins catalyze the formation and isomerization of protein disulfide bonds in the endoplasmic reticulum and prevent the buildup of misfolded proteins under abiotic stress conditions. In the present study, we conducted the first comprehensive genome-wide exploration of the PDI gene family in tomato (Solanum lycopersicum L.). We identified 19 tomato PDI genes that were unevenly distributed on 8 of the 12 tomato chromosomes, with segmental duplications detected for 3 paralogous gene pairs. Expression profiling of the PDI genes revealed that most of them were differentially expressed across different organs and developmental stages of the fruit. Furthermore, most of the PDI genes were highly induced by heat, salt, and abscisic acid (ABA) treatments, while relatively few of the genes were induced by cold and nutrient and water deficit (NWD) stresses. The predominant expression of SlPDI1-1, SlPDI1-3, SlPDI1-4, SlPDI2-1, SlPDI4-1, and SlPDI5-1 in response to abiotic stress and ABA treatment suggested they play regulatory roles in abiotic stress tolerance in tomato in an ABA-dependent manner. Our results provide new insight into the structure and function of PDI genes and will be helpful for the selection of candidate genes involved in fruit development and abiotic stress tolerance in tomato.

Genome-wide characterization, expression profiling, and post-transcriptional study of GASA gene family

Gene Reports ◽  
2020 ◽  
Vol 20 ◽  
pp. 100795 ◽  
Author(s):  
Sadra Rezaee ◽  
Mostafa Ahmadizadeh ◽  
Parviz Heidari
Keyword(s):  
Gene Family ◽  
Expression Profiling ◽  
Genome Wide

scholarly journals Genome-Wide Identification, Expression Profiling, and Evolution of Phosphate Transporter Gene Family in Green Algae

2020 ◽  
Vol 11 ◽  
Author(s):  
Long Wang ◽  
Liang Xiao ◽  
Haiyan Yang ◽  
Guanglei Chen ◽  
Houqing Zeng ◽  
...  
Keyword(s):  
Gene Family ◽  
Green Algae ◽  
Expression Profiling ◽  
Phosphate Transporter ◽  
Transporter Gene ◽  
Genome Wide

scholarly journals Genome-wide analysis and expression profiling of the PIN auxin transporter gene family in soybean (Glycine max)

BMC Genomics ◽  
2015 ◽  
Vol 16 (1) ◽  
Author(s):  
Yongqin Wang ◽  
Chenglin Chai ◽  
Babu Valliyodan ◽  
Christine Maupin ◽  
Brad Annen ◽  
...  
Keyword(s):  
Glycine Max ◽  
Gene Family ◽  
Expression Profiling ◽  
Transporter Gene ◽  
Genome Wide Analysis ◽  
Genome Wide ◽  
Auxin Transporter

scholarly journals Genome-wide identification and expression profiling of trihelix gene family under abiotic stresses in wheat

BMC Genomics ◽  
2019 ◽  
Vol 20 (1) ◽  
Author(s):  
Jie Xiao ◽  
Rui Hu ◽  
Ting Gu ◽  
Jiapeng Han ◽  
Ding Qiu ◽  
...  
Keyword(s):  
Gene Family ◽  
Expression Profiling ◽  
Abiotic Stresses ◽  
Genome Wide
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