Genome‐wide Transcriptional Analysis of Tetrahymena thermophila Response to Exogenous Cholesterol

2019 ◽  
Vol 67 (2) ◽  
pp. 209-222
Author(s):  
Sebastián R. Najle ◽  
Josefina Hernández ◽  
Eduard Ocaña‐Pallarès ◽  
Nicolás García Siburu ◽  
Alejandro D. Nusblat ◽  
...  
Keyword(s):  
Tetrahymena Thermophila ◽  
Transcriptional Analysis ◽  
Exogenous Cholesterol ◽  
Genome Wide

Genome-wide identification and transcriptional analysis of ammonium transporters in Saccharum

Genomics ◽  
2021 ◽  
Author(s):  
Zilin Wu ◽  
Xiaoning Gao ◽  
Nannan Zhang ◽  
Xiaomin Feng ◽  
Yonghong Huang ◽  
...  
Keyword(s):  
Transcriptional Analysis ◽  
Genome Wide ◽  
Ammonium Transporters

Abstract A13: Genome-wide transcriptional analysis of HDAC inhibition-induced apoptosis in synovial sarcoma

2018 ◽  
Author(s):  
Aimee N. Laporte ◽  
Neal M. Poulin ◽  
Alireza Lorzadeh ◽  
Xiu Qing Wang ◽  
Ryan Vander werff ◽  
...  
Keyword(s):  
Synovial Sarcoma ◽  
Transcriptional Analysis ◽  
Hdac Inhibition ◽  
Genome Wide ◽  
Induced Apoptosis

scholarly journals Genome-wide identification, classification and transcriptional analysis of nitrate and ammonium transporters in Coffea

2017 ◽  
Vol 40 (1 suppl 1) ◽  
pp. 346-359 ◽  
Author(s):  
Tiago Benedito dos Santos ◽  
Joni Esrom Lima ◽  
Mariane Silva Felicio ◽  
João Danillo Moura Soares ◽  
Douglas Silva Domingues
Keyword(s):  
Transcriptional Analysis ◽  
Genome Wide ◽  
Ammonium Transporters

scholarly journals Genome-wide comparison of phage M13-infected vs. uninfectedEscherichia coli

2005 ◽  
Vol 51 (1) ◽  
pp. 29-35 ◽  
Author(s):  
Fredrik Karlsson ◽  
Ann-Christin Malmborg-Hager ◽  
Ann-Sofie Albrekt ◽  
Carl A.K Borrebaeck
Keyword(s):  
Escherichia Coli ◽  
Stress Response ◽  
Acid Stress ◽  
Phage Infection ◽  
Transcriptional Analysis ◽  
Filamentous Phage ◽  
Phosphotransferase System ◽  
E Coli ◽  
Genome Wide

To identify Escherichia coli genes potentially regulated by filamentous phage infection, we used oligonucleotide microarrays. Genome-wide comparison of phage M13-infected and uninfected E. coli, 2 and 20 min after infection, was performed. The analysis revealed altered transcription levels of 12 E. coli genes in response to phage infection, and the observed regulation of phage genes correlated with the known in vivo pattern of M13 mRNA species. Ten of the 12 host genes affected could be grouped into 3 different categories based on cellular function, suggesting a coordinated response. The significantly upregulated genes encode proteins involved in reactions of the energy-generating phosphotransferase system and transcription processing, which could be related to phage transcription. No genes belonging to any known E. coli stress response pathways were scored as upregulated. Furthermore, phage infection led to significant downregulation of transcripts of the bacterial genes gadA, gadB, hdeA, gadE, slp, and crl. These downregulated genes are normally part of the host stress response mechanisms that protect the bacterium during conditions of acid stress and stationary phase transition. The phage-infected cells demonstrated impaired function of the oxidative and the glutamate-dependent acid resistance systems. Thus, global transcriptional analysis and functional analysis revealed previously unknown host responses to filamentous phage infection.Key words: filamentous phage infection, global transcriptional analysis, AR, Escherichia coli.

scholarly journals Genome-wide transcriptional analysis of submerged lotus reveals cooperative regulation and gene responses

2018 ◽  
Vol 8 (1) ◽  
Author(s):  
Bei Wang ◽  
Qijiang Jin ◽  
Xiao Zhang ◽  
Neil S. Mattson ◽  
Huihui Ren ◽  
...  
Keyword(s):  
Transcriptional Analysis ◽  
Genome Wide
Sign in / Sign up

Export Citation Format

Share Document