Complex evolutionary history of the pallid dotted-blue butterfly (Lycaenidae: Euphilotes pallescens ) in the Great Basin of western North America

2013 ◽  
Vol 40 (11) ◽  
pp. 2059-2070 ◽  
Author(s):  
Joseph S. Wilson ◽  
Michelle Sneck ◽  
Dennis D. Murphy ◽  
Chris C. Nice ◽  
James A. Fordyce ◽  
...  
Keyword(s):  
North America ◽  
Great Basin ◽  
Evolutionary History ◽  
Western North America ◽  
History Of ◽  
Blue Butterfly ◽  
Complex Evolutionary History

Evolutionary history of alpine and subalpineDaphniain western North America

2013 ◽  
Vol 58 (7) ◽  
pp. 1512-1522 ◽  
Author(s):  
Brooks E. Miner ◽  
Roland A. Knapp ◽  
John K. Colbourne ◽  
Michael E. Pfrender
Keyword(s):  
North America ◽  
Evolutionary History ◽  
Western North America ◽  
History Of

Evolutionary history of New World ticks of the genus Dermacentor (Ixodida: Ixodidae), and the origin of D. variabilis

2019 ◽  
Vol 127 (4) ◽  
pp. 863-875 ◽  
Author(s):  
Paula Lado ◽  
Hans Klompen
Keyword(s):  
North America ◽  
Evolutionary History ◽  
New World ◽  
Dermacentor Variabilis ◽  
Eastern North America ◽  
Western North America ◽  
Land Bridge ◽  
Phylogenetic Reconstructions ◽  
History Of ◽  
Migration Event

Abstract This study integrates biogeographical and phylogenetic data to determine the evolutionary history of the New World Dermacentor, and the origin of D. variabilis. The phylogenetic reconstructions presented here strongly support the hypothesis of an Afrotropical origin for Dermacentor, with later dispersal to Eurasia and the Nearctic. Phylogenetic and biogeographical data suggest that the genus reached the New World through the Beringia land bridge, from south-east Asia. The monophyly of the genus is supported, and most of the New World Dermacentor species appear as monophyletic. Dermacentor occidentals constitutes the sister lineage of D. variabilis, and the latter is subdivided into two well-supported clades: an eastern and a western clade. The western clade is genetically more variable than the eastern. The genus Dermacentor probably originated in Africa, and dispersed to the Palearctic and then to the New World through the Beringian route. Dermacentor variabilis appears to have originated in western North America, and then dispersed to eastern North America, probably in a single migration event.

scholarly journals Complex History of Codiversification and Host Switching of a Newfound Soricid-Borne Orthohantavirus in North America

Viruses ◽  
2019 ◽  
Vol 11 (7) ◽  
pp. 637 ◽  
Author(s):  
Schuyler W. Liphardt ◽  
Hae Ji Kang ◽  
Laurie J. Dizney ◽  
Luis A. Ruedas ◽  
Joseph A. Cook ◽  
...  
Keyword(s):  
North America ◽  
Evolutionary History ◽  
Evolutionary Dynamics ◽  
Population Expansion ◽  
Host Population ◽  
Viral Gene ◽  
Host Switching ◽  
Western North America ◽  
Mitochondrial Cytochrome B ◽  
History Of

Orthohantaviruses are tightly linked to the ecology and evolutionary history of their mammalian hosts. We hypothesized that in regions with dramatic climate shifts throughout the Quaternary, orthohantavirus diversity and evolution are shaped by dynamic host responses to environmental change through processes such as host isolation, host switching, and reassortment. Jemez Springs virus (JMSV), an orthohantavirus harbored by the dusky shrew (Sorex monticola) and five close relatives distributed widely in western North America, was used to test this hypothesis. Total RNAs, extracted from liver or lung tissue from 164 shrews collected from western North America during 1983–2007, were analyzed for orthohantavirus RNA by reverse transcription polymerase chain reaction (RT-PCR). Phylogenies inferred from the L-, M-, and S-segment sequences of 30 JMSV strains were compared with host mitochondrial cytochrome b. Viral clades largely corresponded to host clades, which were primarily structured by geography and were consistent with hypothesized post-glacial expansion. Despite an overall congruence between host and viral gene phylogenies at deeper scales, phylogenetic signals were recovered that also suggested a complex pattern of host switching and at least one reassortment event in the evolutionary history of JMSV. A fundamental understanding of how orthohantaviruses respond to periods of host population expansion, contraction, and secondary host contact is the key to establishing a framework for both more comprehensive understanding of orthohantavirus evolutionary dynamics and broader insights into host–pathogen systems.

scholarly journals Resolving the Evolutionary History of Campanula (Campanulaceae) in Western North America

PLoS ONE ◽  
2011 ◽  
Vol 6 (9) ◽  
pp. e23559 ◽  
Author(s):  
Barry M. Wendling ◽  
Kurt E. Galbreath ◽  
Eric G. DeChaine
Keyword(s):  
North America ◽  
Evolutionary History ◽  
Western North America ◽  
History Of

scholarly journals Genetic Diversity of Rice stripe necrosis virus and New Insights into Evolution of the Genus Benyvirus

Viruses ◽  
2021 ◽  
Vol 13 (5) ◽  
pp. 737
Author(s):  
Issiaka Bagayoko ◽  
Marcos Giovanni Celli ◽  
Gustavo Romay ◽  
Nils Poulicard ◽  
Agnès Pinel-Galzi ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Genetic Variability ◽  
Sierra Leone ◽  
Evolutionary History ◽  
Molecular Diversity ◽  
Genomic Data ◽  
Gene Recombination ◽  
Necrosis Virus ◽  
History Of ◽  
Complex Evolutionary History

The rice stripe necrosis virus (RSNV) has been reported to infect rice in several countries in Africa and South America, but limited genomic data are currently publicly available. Here, eleven RSNV genomes were entirely sequenced, including the first corpus of RSNV genomes of African isolates. The genetic variability was differently distributed along the two genomic segments. The segment RNA1, within which clusters of polymorphisms were identified, showed a higher nucleotidic variability than did the beet necrotic yellow vein virus (BNYVV) RNA1 segment. The diversity patterns of both viruses were similar in the RNA2 segment, except for an in-frame insertion of 243 nucleotides located in the RSNV tgbp1 gene. Recombination events were detected into RNA1 and RNA2 segments, in particular in the two most divergent RSNV isolates from Colombia and Sierra Leone. In contrast to BNYVV, the RSNV molecular diversity had a geographical structure with two main RSNV lineages distributed in America and in Africa. Our data on the genetic diversity of RSNV revealed unexpected differences with BNYVV suggesting a complex evolutionary history of the genus Benyvirus.

Rhizobial plasmids — replication, structure and biological role

2012 ◽  
Vol 7 (4) ◽  
pp. 571-586 ◽  
Author(s):  
Andrzej Mazur ◽  
Piotr Koper
Keyword(s):  
Genome Organization ◽  
Soil Bacteria ◽  
Evolutionary History ◽  
Bacterial Genome ◽  
Biological Role ◽  
Genome Architecture ◽  
Genomic Knowledge ◽  
History Of ◽  
Cryptic Plasmids ◽  
Complex Evolutionary History

AbstractSoil bacteria, collectively named rhizobia, can establish mutualistic relationships with legume plants. Rhizobia often have multipartite genome architecture with a chromosome and several extrachromosomal replicons making these bacteria a perfect candidate for plasmid biology studies. Rhizobial plasmids are maintained in the cells using a tightly controlled and uniquely organized replication system. Completion of several rhizobial genome-sequencing projects has changed the view that their genomes are simply composed of the chromosome and cryptic plasmids. The genetic content of plasmids and the presence of some important (or even essential) genes contribute to the capability of environmental adaptation and competitiveness with other bacteria. On the other hand, their mosaic structure results in the plasticity of the genome and demonstrates a complex evolutionary history of plasmids. In this review, a genomic perspective was employed for discussion of several aspects regarding rhizobial plasmids comprising structure, replication, genetic content, and biological role. A special emphasis was placed on current post-genomic knowledge concerning plasmids, which has enriched the view of the entire bacterial genome organization by the discovery of plasmids with a potential chromosome-like role.

scholarly journals Phylogeography of the pallid kangaroo mouse,Microdipodops pallidus: a sand-obligate endemic of the Great Basin, western North America

2008 ◽  
Vol 35 (11) ◽  
pp. 2102-2118 ◽  
Author(s):  
John C. Hafner ◽  
Nathan S. Upham ◽  
Emily Reddington ◽  
Candice W. Torres
Keyword(s):  
North America ◽  
Great Basin ◽  
Western North America

A total evidence approach using palynological characters to infer the complex evolutionary history of the Asian Impatiens (Balsaminaceae)

Taxon ◽  
2012 ◽  
Vol 61 (2) ◽  
pp. 355-367 ◽  
Author(s):  
Steven B. Janssens ◽  
Yi Song Wilson ◽  
Yong-Ming Yuan ◽  
Anne Nagels ◽  
Erik F. Smets ◽  
...  
Keyword(s):  
Evolutionary History ◽  
Total Evidence ◽  
History Of ◽  
Complex Evolutionary History
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