scholarly journals Microbial signature lipid biomarker analysis - an approach that is still preferred, even amid various method modifications

2015 ◽  
Vol 118 (6) ◽  
pp. 1251-1263 ◽  
Author(s):  
C. Willers ◽  
P.J. Jansen van Rensburg ◽  
S. Claassens
Keyword(s):  
Lipid Biomarker ◽  
Biomarker Analysis

scholarly journals Analyses of depositional environments of the Marcellus formation in New York using biomarker and trace metal proxies

2021 ◽  
Author(s):  
Reilly M. Blocho ◽  
Richard W. Smith ◽  
Mark R. Noll
Keyword(s):  
Fatty Acids ◽  
New York ◽  
Organic Matter ◽  
New York State ◽  
Depositional Environments ◽  
Average Chain Length ◽  
Lipid Biomarker ◽  
Two Samples ◽  
Biomarker Analysis ◽  
Marcellus Formation

AbstractThe purpose of this study was to observe how the composition of organic matter (OM) and the extent of anoxia during deposition within the Marcellus Formation in New York varied by distance from the sediment source in eastern New York. Lipid biomarkers (n-alkanes and fatty acids) in the extractable organic component (bitumen) of the shale samples were analyzed, and proxies such as the average chain length (ACL), aquatic to terrestrial ratio (ATR) and carbon preference index (CPI) of n-alkanes were calculated. Fatty acids were relatively non-abundant due to the age of the shale bed, but n-alkane distributions revealed that the primary component of the OM was terrigenous plants. The presence of shorter n-alkane chain lengths in the samples indicated that there was also a minor component of phytoplankton and algal (marine) sourced OM. Whole rock analyses were also conducted, and cerium anomalies were calculated as a proxy for anoxia. All samples had a negative anomaly value, indicating anoxic conditions during deposition. Two samples, however, contained values close to zero and thus were determined to have suboxic conditions. Anoxia and total organic matter (TOM) did not show any spatial trends across the basin, which may be caused by varying depths within the basin during deposition. A correlation between nickel concentrations and TOM was observed and indicates that algae was the primary source of the marine OM, which supports the lipid biomarker analysis. It was determined that the kerogen type of the Marcellus Formation in New York State is type III, consistent with a methane-forming shale bed.

scholarly journals Micrometer scale imaging of sedimentary climate archives – Sample preparation for combined elemental and lipid biomarker analysis

2019 ◽  
Vol 127 ◽  
pp. 81-91 ◽  
Author(s):  
Susanne Alfken ◽  
Lars Wörmer ◽  
Julius S. Lipp ◽  
Jenny Wendt ◽  
Heidi Taubner ◽  
...  
Keyword(s):  
Sample Preparation ◽  
Lipid Biomarker ◽  
Biomarker Analysis ◽  
Micrometer Scale

Aquatic Resources in Foodcrusts: Identification and Implication

Radiocarbon ◽  
2015 ◽  
Vol 57 (4) ◽  
pp. 707-719 ◽  
Author(s):  
Carl Heron ◽  
Oliver E Craig
Keyword(s):  
Radiocarbon Dating ◽  
Isotopic Analysis ◽  
Aquatic Resources ◽  
Carbon And Nitrogen ◽  
Lipid Biomarker ◽  
Biomarker Analysis ◽  
Compound Specific Carbon Isotope ◽  
Analytical Approaches ◽  
Isotope Measurements ◽  
Selection Of

Foodcrusts, the charred surface deposits on pottery vessel surfaces, provide a rich source of data regarding container function. This article reviews recent applications focusing on the detection of aquatic resources (marine and freshwater) in pottery vessels using a range of analytical approaches including bulk isotope measurements of carbon and nitrogen, lipid biomarker analysis, and compound-specific carbon isotope determinations. Such data can help to evaluate the presence of reservoir effects when undertaking radiocarbon dating of foodcrust samples. In particular, molecular and isotopic analysis can aid in the selection of suitable candidates for14C where it can be demonstrated that aquatic resources are unlikely to contribute to the residue. Prospects for compound-specific14C analysis of lipids in foodcrusts and ceramic-absorbed residues are also discussed.

scholarly journals Organic carbon characteristics in yedoma and thermokarst deposits on Baldwin Peninsula, West-Alaska

2018 ◽  
Author(s):  
Loeka L. Jongejans ◽  
Jens Strauss ◽  
Josefine Lenz ◽  
Francien Peterse ◽  
Kai Mangelsdorf ◽  
...  
Keyword(s):  
Organic Carbon ◽  
Lake Sediments ◽  
Lake Basin ◽  
Study Region ◽  
Thermokarst Lake ◽  
Discontinuous Permafrost ◽  
Lipid Biomarker ◽  
Biomarker Analysis ◽  
Thawing Permafrost

Abstract. As Arctic warming continues and permafrost thaws, more soil and sedimentary organic carbon (OC) will be decomposed in northern high latitudes. Still, uncertainties remain in the quantity and quality of OC stored in different deposit types of permafrost landscapes. This study presents OC data from deep permafrost and lake deposits on the Baldwin Peninsula which is located in the southern portion of the continuous permafrost zone in West Alaska. Sediment samples from yedoma and drained thermokarst lake basin (DTLB) deposits as well as thermokarst lake sediments were analyzed for cryostratigraphical and biogeochemical parameters and their lipid biomarker composition to identify the size and quality of belowground OC pools in ice-rich permafrost on Baldwin Peninsula. We provide the first detailed characterization of yedoma deposits on Baldwin Peninsula. We show that three quarters of soil organic carbon in the frozen deposits of the study region (total of 68 Mt) is stored in DTLB deposits (52 Mt) and one quarter in the frozen yedoma deposits (16 Mt). The lake sediments contain a relatively small OC pool (4 Mt), but have the highest volumetric OC content (93 kg/m3) compared to the DTLB (35 kg/m3) and yedoma deposits (8 kg/m3), largely due to differences in the ground ice content. The biomarker analysis indicates that the OC in both yedoma and DTLB deposits is mainly of terrestrial origin. Nevertheless, the relatively high carbon preference index of plant leaf waxes in combination with a lack of degradation trend with depth in the yedoma deposits indicates that OC stored in yedoma is less degraded than that stored in DTLB deposits. This suggests that OC in yedoma has a higher potential for decomposition upon thaw, despite the relatively small size of this pool. These findings highlight the importance of molecular OC analysis for determining the potential future greenhouse gas emissions from thawing permafrost, especially because this area close to the discontinuous permafrost boundary is projected to thaw substantially within the 21st century.

Ice algae resource utilization by benthic macro- and megafaunal communities on the Pacific Arctic shelf determined through lipid biomarker analysis

2020 ◽  
Vol 651 ◽  
pp. 23-43 ◽  
Author(s):  
CW Koch ◽  
LW Cooper ◽  
JM Grebmeier ◽  
K Frey ◽  
TA Brown
Keyword(s):  
Organic Carbon ◽  
Sea Ice ◽  
Feeding Strategy ◽  
Food Sources ◽  
Ice Algae ◽  
Surface Deposit ◽  
Suspension Feeders ◽  
Deposit Feeders ◽  
Lipid Biomarker ◽  
Biomarker Analysis

We studied ice algae utilization by benthic fauna from the northern Bering and Chukchi Seas using highly branched isoprenoid (HBI) biomarkers. We assessed whether various food acquisition strategies influence the observed HBI signatures. The proportion of phytoplankton to ice algae-sourced HBIs was determined through the H-Print approach that is presumed to reflect the percentage of sea ice organic carbon (iPOC) incorporated into tissues, relative to phytoplankton organic carbon. Cluster analysis separated 3 groups based on location and feeding strategy that were significantly influenced by annual sea ice persistence. Ice algae utilization was most significant in the northeast Chukchi Sea, where seasonal sea ice was present the longest. General feeding strategy was determined to be a significant factor in the degree of ice algae utilization. Predominant deposit feeders (both surface and subsurface) used more ice algae relative to suspension feeders. Organic carbon incorporated by predominant suspension feeders was primarily phytoplankton-based. The vast majority of all organisms sampled (~90%) incorporated a measurable quantity of iPOC. Sipunculids and brittle stars had the highest relative dependence on ice algae, while other taxa displayed plastic dietary responses, including the suspension/surface deposit feeder Macoma calcarea. This study indicates that ice algae are widely utilized in Pacific Arctic benthic food webs, but most benthic organisms displayed flexibility in consuming the available food sources. The elevated utilization of ice algae by deposit feeders may prove to be a disadvantage for these organisms if they cannot adapt to the ongoing decline of iPOC as seasonal sea ice declines.

Quantification of biomarkers as an estimation of soil organic matter turnover and sources under a crop rotation

2021 ◽  
Author(s):  
Layla M. San-Emeterio ◽  
Ian D. Bull ◽  
Jens Holtvoeth ◽  
Rafael López ◽  
Francisco J. González-Vila ◽  
...  
Keyword(s):  
Organic Matter ◽  
Organic Carbon ◽  
Soil Organic Carbon ◽  
Crop Rotation ◽  
Total Lipid ◽  
C3 Plant ◽  
Organic Matter Turnover ◽  
Lipid Biomarker ◽  
Biomarker Analysis ◽  
The Impact

<p>Lipid biomarker analysis is an efficient tool for tracing organic matter sources in diverse environments. The quantification of biomarkers facilitates the location of soil organic carbon (SOC) from different sources in a soil profile. According to their structure, biomarkers from total lipid extracts (TLE) would exhibit different degrees of susceptibility to degradation, affecting thus their preservation in soils. Hence, it is crucial to better identify these biomarkers according to diverse stability scales. The aim of this study is to assess SOC contributions from aboveground and to develop a wider approach based on the allocation of C to quantitatively assess the sources of organic matter in low SOM content, highly weathered Mediterranean soils, following a C3-C4 rotation experiment.</p><p>Soil samples were taken from three depth intervals (0-5, 5-20, 20-40 cm) from a Mediterranean agricultural soil at “La Hampa” experimental station used for a crop rotation experiment with wheat (C3 plant) and maize (C4 plant). Lipids were extracted and quantified as described in [1].</p><p>The total lipid extracts were dominated by a homologous series of n-alkanols (saturated alcohols), short-, mid- and long-chain fatty acid methyl ester (FAME), branched FAME, unsaturated (mono- and polyunsaturated) FAME and sterols. Short-chain FAME, monounsaturated FAME were the most abundant fractions of free lipids. Mono-unsaturated alkanoic acids (Cn:1 FA) were detected in considerable amounts in all samples, namely various isomers of C16:1, C18:1, C20:1 and C22:1; these are believed to be mainly synthesised by soil bacteria. A significant increase of these compounds in rotation plots leads to an effective microbial consumption of labile organic matter in the surface soil [2]. Regarding FAME, the observed chain lengths ranged from C13 to C32, showing a unimodal distribution maximising at C16 and C18. These compounds are attributed also to microbial products, supporting our findings from the high proportion of the monounsaturated compounds found. In general, and in relation with all compounds, the abundances increased up to 20% compared with the control plots representing the initial content.</p><p>These results indicate that, only after three years of crop rotation, a considerable contribution of soil organic carbon is inherited from bacterial activity. The combination of extractable lipids has been shown to validate the use of TLE as a proxy for source and other information on vegetation change and soil processes. This work will bring a discussion on the use of these compounds for tracing the impact of crop rotation on carbon storage.</p><p>Acknowledgement: Ministerio de Ciencia Innovación y Universidades (MICIU) for INTERCARBON project (CGL2016-78937-R). L. San Emeterio also thanks MICIU for funding FPI research grants (BES-2017-07968). Mrs Desiré Monis is acknowledged for technical assistance.</p><p>[1] M. San-Emeterio, L., Bull, I. D., Holtvoeth, J., and González-Pérez, J. A.: Compound-specific isotopic analysis of fatty acids in three soil profiles to estimate organic matter turnover in agricultural soils., <em>EGU General Assembly 2020</em>, Online, 4–8 May 2020, EGU2020-18526, https://doi.org/10.5194/egusphere-egu2020-18526, 2020.</p><p>[2] Tu, T. T. N., Egasse, C., Anquetil, C., Zanetti, F., Zeller, B., Huon, S., & Derenne, S. (2017). Leaf lipid degradation in soils and surface sediments: A litterbag experiment. <em>Organic Geochemistry</em>, 104, 35-41.</p>

Sign in / Sign up

Export Citation Format

Share Document