scholarly journals Bacterial community response to a preindustrial-to-future CO2 gradient is limited and soil specific in Texas Prairie grassland

2018 ◽  
Vol 24 (12) ◽  
pp. 5815-5827 ◽  
Author(s):  
Swastika Raut ◽  
Herbert W. Polley ◽  
Philip A. Fay ◽  
Sanghoon Kang
Keyword(s):  
Bacterial Community ◽  
Community Response

scholarly journals Human Skin Bacterial Community Response to Probiotic (Lactobacillus reuteri DSM 17938) Introduction

2020 ◽  
Vol 8 (8) ◽  
pp. 1223
Author(s):  
Marie Frerejacques ◽  
Camille Rousselle ◽  
Loüen Gauthier ◽  
Salomé Cottet-Emard ◽  
Léa Derobert ◽  
...  
Keyword(s):  
Bacterial Community ◽  
Lactobacillus Reuteri ◽  
Community Response ◽  
Community Diversity ◽  
Colonization Rate ◽  
Bacterial Strains ◽  
Skin Microbiota ◽  
Potential Health ◽  
The Impact

The introduction of a strain or consortium has often been considered as a potential solution to restore microbial ecosystems. Extensive research on the skin microbiota has led to the development of probiotic products (with live bacterial strains) that are likely to treat dysbiosis. However, the effects of such introductions on the indigenous microbiota have not yet been investigated. Here, through a daily application of Lactobacillus reuteri DSM 17938 on volunteers’ forearm skin, we studied in vivo the impact of a probiotic on the indigenous skin bacterial community diversity using Terminal-Restriction Fragment Length Polymorphism (T-RFLP) for 3 weeks. The results demonstrate that Lactobacillus reuteri DSM 17938 inoculum had a transient effect on the indigenous community, as the resilience phenomenon was observed within the skin microbiota. Moreover, Lactobacillus reuteri DSM 17938 monitoring showed that, despite a high level of detection after 2 weeks of application, thereafter the colonization rate drops drastically. The probiotic colonization rate was correlated significantly to the effect on the indigenous microbial community structure. These preliminary results suggest that the success of probiotic use and the potential health benefits resides in the interactions with the human microbiota.

scholarly journals Effects of Phytoremediation Treatment on Bacterial Community Structure and Diversity in Different Petroleum-Contaminated Soils

2018 ◽  
Vol 15 (10) ◽  
pp. 2168 ◽  
Author(s):  
Yuanyuan Shen ◽  
Yu Ji ◽  
Chunrong Li ◽  
Pingping Luo ◽  
Wenke Wang ◽  
...  
Keyword(s):  
Community Structure ◽  
Bacterial Community ◽  
Contaminated Soils ◽  
Bacterial Community Structure ◽  
High Throughput Sequencing ◽  
Cost Effective ◽  
Northwest China ◽  
Community Response ◽  
Available Nitrogen ◽  
Increased Risk

Increased exploitation and use of petroleum resources is leading to increased risk of petroleum contamination of soil and groundwater. Although phytoremediation is a widely-used and cost-effective method for rehabilitating soils polluted by petroleum, bacterial community structure and diversity in soils undergoing phytoremediation is poorly understood. We investigate bacterial community response to phytoremediation in two distinct petroleum-contaminated soils (add prepared petroleum-contaminated soils) from northwest China, Weihe Terrace soil and silty loam from loess tableland. High-throughput sequencing technology was used to compare the bacterial communities in 24 different samples, yielding 18,670 operational taxonomic units (OTUs). The dominant bacterial groups, Proteobacteria (31.92%), Actinobacteria (16.67%), Acidobacteria (13.29%) and Bacteroidetes (6.58%), increased with increasing petroleum concentration from 3000 mg/kg–10,000 mg/kg, while Crenarchaeota (13.58%) and Chloroflexi (4.7%) decreased. At the order level, RB41, Actinomycetales, Cytophagales, envOPS12, Rhodospirillales, MND1 and Xanthomonadales, except Nitrososphaerales, were dominant in Weihe Terrace soil. Bacterial community structure and diversity in the two soils were significantly different at similar petroleum concentrations. In addition, the dominant genera were affected by available nitrogen, which is strongly associated with the plants used for remediation. Overall, the bacterial community structure and diversity were markedly different in the two soils, depending on the species of plants used and the petroleum concentration.

scholarly journals Rhizosphere Bacterial Community Response to Continuous Cropping of Tibetan Barley

2020 ◽  
Vol 11 ◽  
Author(s):  
Youhua Yao ◽  
Xiaohua Yao ◽  
Likun An ◽  
Yixiong Bai ◽  
Deqing Xie ◽  
...  
Keyword(s):  
Bacterial Community ◽  
Total Nitrogen ◽  
Rhizosphere Soil ◽  
Community Response ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Continuous Cropping ◽  
Health Maintenance ◽  
Rhizosphere Bacterial Community

Long-term continuous cropping influences the nutrient of soil and microbiome of the rhizosphere, resulting in the yield decrease of crops. Tibetan barley is a dominant cereal crop cultivated at high altitudes in Tibet. Its growth and yield are negatively affected by continuous cropping; however, the response of the rhizosphere microbial community to continuous cropping remains poorly understood. To address this question, we investigated the bacterial community structure and conducted predictive functional profiling on rhizosphere soil from Tibetan barley monocropped for 2–6 years. The results revealed that long-term continuous cropping markedly decreased total nitrogen and available nitrogen in rhizosphere soil. Illumina high-throughput sequencing of 16S rRNA genes indicated that the bacterial community was altered by continuous cropping; operational taxonomic units (OTUs), Shannon index, and Faith Phylogenetic Diversity decreased with increasing monocropping duration. Relative abundances of family Pseudomonadaceae, Cytophagaceae, and Nocardioidaceae were significantly increased, while those of Chitinophagaceae and Sphingomonadaceae were significantly decreased (all p < 0.05). Besides, continuous cropping significantly increased the abundance of bacteria associated with chemoheterotrophy, aromatic compound degradation, and nitrate reduction (p < 0.05). Generalized boosted regression model analysis indicated that total nitrogen was the most important contributor to the bacterial community diversity, indicating their roles in shaping the rhizosphere bacterial community during continuous cropping. Overall, continuous cropping had a significant impact on the structure of bacterial communities in rhizosphere soil of Tibetan barley, and these results will improve our understanding of soil bacterial community regulation and soil health maintenance in Tibetan barley farm systems.

Soil bacterial community response to rhizoma peanut incorporation into florida pastures

2021 ◽  
Author(s):  
Victor A. Guerra ◽  
Lukas Beule ◽  
Cheryl L. Mackowiak ◽  
Jose C.B. Dubeux ◽  
Ann R.S. Blount ◽  
...  
Keyword(s):  
Bacterial Community ◽  
Community Response ◽  
Soil Bacterial Community ◽  
Soil Bacterial ◽  
Rhizoma Peanut

Bacterial community changes along a salinity gradient in a Chinese wetland

2013 ◽  
Vol 59 (9) ◽  
pp. 611-619 ◽  
Author(s):  
Lei Zhang ◽  
Guang Gao ◽  
Xiangming Tang ◽  
Keqiang Shao ◽  
Sai Bayartu ◽  
...  
Keyword(s):  
Bacterial Community ◽  
Salinity Gradient ◽  
Sharp Decrease ◽  
Northwest China ◽  
Community Response ◽  
16S Rrna Genes ◽  
Rrna Genes ◽  
Salinity Range ◽  
Small Scale ◽  
Salinity Levels

We analyzed the composition and diversity of a bacterial community to determine its response to increasing salinity in the Xiangsi Lake wetland in the arid region of northwest China. We studied 12 sites, ranging from freshwater to saltwater habitats, using polymerase chain reaction (PCR)-based terminal restriction fragment length polymorphism (T-RFLP) and sequencing of the 16S rRNA genes of 5 selected samples. Cluster analysis and phylogenetic analysis revealed that the bacterial community changed significantly in response to increased salinity within the small-scale wetland (50.8 km2). Detailed analysis showed that (i) Betaproteobacteria can maintain balanced growth over a salinity range (from 0.34 to 6.86 g/L) through intergenus changes in community structure, followed by a sharp decrease in relative abundance (from 62.2% to 16.0%) when salinity reaches 26.18 g/L; (ii) salt-sensitive and halophobic taxa were progressively replaced by halotolerant and halophilic taxa with increasing salinity; (iii) bacterial diversity was lowest at intermediate salinity levels (6.86 g/L); and (iv) an increasing percentage of unclassified bacterial taxa were found with increasing salinity. This study has implications to improve understanding of bacterial community response to water salinization.

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