Trouble at the top? Restricted distribution and extreme population isolation in an alpine crustacean assemblage with unexpected lineage diversity

2016 ◽  
Vol 61 (11) ◽  
pp. 1891-1904 ◽  
Author(s):  
Jude Hatley ◽  
Nicholas P. Murphy
Keyword(s):  
Population Isolation ◽  
Restricted Distribution ◽  
Crustacean Assemblage ◽  
Lineage Diversity

scholarly journals Using genetic and phenetic markers to assess population isolation within the southernmost tsetse fly belt in Africa

2019 ◽  
Vol 86 (1) ◽  
Author(s):  
Chantel J. De Beer ◽  
Gert J. Venter ◽  
Marc J.B. Vreysen ◽  
Fernando C. Mulandane ◽  
Luis Neves ◽  
...  
Keyword(s):  
Tsetse Fly ◽  
Population Isolation

scholarly journals Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK

Science ◽  
2021 ◽  
pp. eabf2946
Author(s):  
Louis du Plessis ◽  
John T. McCrone ◽  
Alexander E. Zarebski ◽  
Verity Hill ◽  
Christopher Ruis ◽  
...  
Keyword(s):  
Large Scale ◽  
Phylogenetic Analyses ◽  
Transmission Dynamics ◽  
Genetic Lineage ◽  
Size Dependent ◽  
Spatio Temporal ◽  
The Uk ◽  
Lineage Structure ◽  
And Control ◽  
Lineage Diversity

The UK’s COVID-19 epidemic during early 2020 was one of world’s largest and unusually well represented by virus genomic sampling. Here we reveal the fine-scale genetic lineage structure of this epidemic through analysis of 50,887 SARS-CoV-2 genomes, including 26,181 from the UK sampled throughout the country’s first wave of infection. Using large-scale phylogenetic analyses, combined with epidemiological and travel data, we quantify the size, spatio-temporal origins and persistence of genetically-distinct UK transmission lineages. Rapid fluctuations in virus importation rates resulted in >1000 lineages; those introduced prior to national lockdown tended to be larger and more dispersed. Lineage importation and regional lineage diversity declined after lockdown, while lineage elimination was size-dependent. We discuss the implications of our genetic perspective on transmission dynamics for COVID-19 epidemiology and control.

scholarly journals Genetic Consequences of Fence Confinement in a Population of White-Tailed Deer

Diversity ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 126
Author(s):  
Emily K. Latch ◽  
Kenneth L. Gee ◽  
Stephen L. Webb ◽  
Rodney L. Honeycutt ◽  
Randy W. DeYoung ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Mitochondrial Dna ◽  
Wildlife Management ◽  
Field Observations ◽  
Adaptive Potential ◽  
Population Isolation ◽  
Potential Benefits ◽  
Wildlife Populations ◽  
Mtdna Diversity

Fencing wildlife populations can aid wildlife management goals, but potential benefits may not always outweigh costs of confinement. Population isolation can erode genetic diversity and lead to the accumulation of inbreeding, reducing viability and limiting adaptive potential. We used microsatellite and mitochondrial DNA data collected from 640 white-tailed deer confined within a 1184 ha fence to quantify changes in genetic diversity and inbreeding over the first 12 years of confinement. Genetic diversity was sustained over the course of the study, remaining comparable to unconfined white-tailed deer populations. Uneroded genetic diversity suggests that genetic drift is mitigated by a low level of gene flow, which supports field observations that the fence is not completely impermeable. In year 9 of the study, we observed an unexpected influx of mtDNA diversity and drop in inbreeding as measured by FIS. A male harvest restriction imposed that year increased male survival, and more diverse mating may have contributed to the inbreeding reduction and temporary genetic diversity boost we observed. These data add to our understanding of the long-term impacts of fences on wildlife, but also highlight the importance of continued monitoring of confined populations.

Cryptic lineage diversity in the zoonotic pathogen Angiostrongylus cantonensis

2017 ◽  
Vol 107 ◽  
pp. 404-414 ◽  
Author(s):  
Sirilak Dusitsittipon ◽  
Charles D. Criscione ◽  
Serge Morand ◽  
Chalit Komalamisra ◽  
Urusa Thaenkham
Keyword(s):  
Angiostrongylus Cantonensis ◽  
Zoonotic Pathogen ◽  
Cryptic Lineage ◽  
Lineage Diversity

Eumops floridanus (Chiroptera: Molossidae)

2021 ◽  
Vol 53 (1009) ◽  
pp. 125-133
Author(s):  
Jessica M Vannatta ◽  
Jeffery A Gore ◽  
Verity L Mathis ◽  
Brian D Carver
Keyword(s):  
United States ◽  
Population Size ◽  
The United States ◽  
Small Population ◽  
Species Level ◽  
Small Population Size ◽  
Restricted Distribution ◽  
Dead Trees ◽  
Fish And Wildlife Service

Abstract Eumops floridanus (Allen, 1932) is a molossid commonly called the Florida bonneted bat or the Florida mastiff bat. Eumops floridanus is the largest species of bat in Florida and is one of 16 species in the genus Eumops. With one of the smallest distributions of any bat in the United States, it is endemic to southern peninsular Florida where it roosts in cavities of live and dead trees and man-made structures. Eumops floridanus was formerly classified as a subspecies of E. glaucinus but has been elevated to species level based on morphology. Due primarily to its restricted distribution, small population size, and the continued loss of habitat, E. floridanus is federally listed as “Endangered” (EN) by the United States Fish and Wildlife Service.

Emergence of salivary gland cell lineage diversity suggests a role for androgen-independent epidermal growth factor receptor signaling

1995 ◽  
Vol 108 (6) ◽  
pp. 2205-2212
Author(s):  
E.M. Durban ◽  
P.G. Nagpala ◽  
P.D. Barreto ◽  
E. Durban
Keyword(s):  
Salivary Gland ◽  
Growth Factor ◽  
Epidermal Growth Factor ◽  
Egf Receptor ◽  
Cell Lineage ◽  
Mrna Levels ◽  
Receptor Signaling ◽  
Receptor Mrna ◽  
Epidermal Growth ◽  
Lineage Diversity

Diversity of cell lineages within glandular organs is generated postnatally by differentiation of committed progenitor cells. Fundamental regulatory aspects of this process are not understood. The mouse submandibular salivary gland (SSG) served as model to assess the role of epidermal growth factor (EGF) receptor signaling during emergence of cell lineage diversity. Temporal fluctuations in EGF receptor mRNA levels coincident with crucial differentiative cell lineage transitions were revealed by RNase protection analyses. Between days 2 and 5, when proacinar cells are maturing and striated duct cells emerge, EGF receptor mRNA levels were highest and all differentiating cells exhibited EGF receptor immunoreactivity. EGF receptor mRNA levels then declined sharply and immunoreactivity became confined to ductal cells. At day 11 in male mice, and days 11 and 16 in females, a second increase in EGF receptor mRNA was detected coincident with emergence of granular convoluted tubule (GCT) cells. With completion of androgen-dependent GCT cell differentiation at the onset of puberty, EGF receptor mRNA levels and intensity of immunoreactivity decreased. Androgen effects on EGF receptor mRNA or immunoreactivity could not be detected. These temporally distinct patterns of EGF receptor expression suggest that this signaling pathway is a mechanism of potential importance in emergence of cell lineage diversity in a glandular organ.

Chirocephalus sanhadjaensis sp. nov., a new chirocephalid species (Branchiopoda: Anostraca) from Numidia (Algeria)

Zootaxa ◽  
2018 ◽  
Vol 4526 (3) ◽  
pp. 381
Author(s):  
LYLIA BOUMENDJEL ◽  
NICOLAS RABET ◽  
MOUNIA AMAROUAYACHE
Keyword(s):  
New Species ◽  
Biological Diversity ◽  
Resting Eggs ◽  
Species Group ◽  
Similar Species ◽  
New Taxon ◽  
Freshwater Ponds ◽  
Restricted Distribution ◽  
A New Species ◽  
Northeastern Algeria

A new species of Chirocephalus collected in temporary freshwater ponds in Northeastern Algeria is described. Chirocephalus sanhadjaensis sp. nov. seems to be restricted to Ain-Magroun and Belkroun pools (Skikda Province). The most similar species is C. marchesonii Ruffo & Vesentini, 1957, which is endemic to Italy. The new taxon, belonging to the “diaphanus” species group of the genus Chirocephalus, is identifiable from all congeners primarily by the shape of the antennal appendages and that of the apex of the distal antennomere of the antennae. The resting eggs of C. sanhadjaensis sp. nov. are similar to those of C. diaphanus or C. salinus but are larger (448.24 ± 30.93 µm). The restricted distribution of this species confirms the high biological diversity of the area of the Guerbes-Sanhadja eco-complex. 

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