scholarly journals Guidelines for planning genomic assessment and monitoring of locally adaptive variation to inform species conservation

2017 ◽  
Vol 11 (7) ◽  
pp. 1035-1052 ◽  
Author(s):  
Sarah P. Flanagan ◽  
Brenna R. Forester ◽  
Emily K. Latch ◽  
Sally N. Aitken ◽  
Sean Hoban
2021 ◽  
Vol 108 (1) ◽  
pp. 145-158 ◽  
Author(s):  
Andrew R. Raduski ◽  
Adam Herman ◽  
Cloe Pogoda ◽  
Kevin M. Dorn ◽  
David L. Van Tassel ◽  
...  

2019 ◽  
Author(s):  
Sarah W. Fitzpatrick ◽  
Gideon S. Bradburd ◽  
Colin T. Kremer ◽  
Patricia E. Salerno ◽  
Lisa M. Angeloni ◽  
...  

AbstractGene flow is an enigmatic evolutionary force because it can limit adaptation but can also help populations escape inbreeding depression. Manipulating gene flow for conservation purposes is a controversial, but potentially powerful management strategy. We use multigenerational pedigrees and genomics to test demographic and evolutionary consequences of manipulating gene flow in two isolated wild Trinidadian guppy populations. We found that on average, hybrids lived longer and reproduced more. Despite overall genome-wide homogenization, alleles potentially associated with local adaptation were not entirely swamped by gene flow. Our results suggest that combining new genomic variation from immigrants with potentially adaptive variation from the recipient population resulted in highly fit hybrids and subsequent increases in population size. Contrary to the prevailing view that gene flow constrains adaptation, our study shows that immigration can produce long-term fitness benefits in small populations without swamping locally adaptive variation.


2015 ◽  
Author(s):  
David S Portnoy ◽  
Jonathan B Puritz ◽  
Christopher M Hollenbeck ◽  
James Gelsleichter ◽  
Demian Chapman ◽  
...  

Sex-biased dispersal is expected to homogenize nuclear genetic variation relative to variation in genetic material inherited through the philopatric sex. When site fidelity occurs across a heterogeneous environment, local selective regimes may alter this pattern. We assessed spatial patterns of variation in nuclear-encoded, single nucleotide polymorphisms (SNPs) and sequences of the mitochondrial control region in bonnethead sharks (Sphyrna tiburo) collected, a species thought to exhibit female philopatry, from summer habitat used for gestation. Geographic patterns of mtDNA haplotypes and putatively neutral SNPs confirmed female philopatry and male-mediated gene flow along the northeastern coast of the Gulf of Mexico. A total of 30 outlier SNP loci were identified; alleles at over half of these loci exhibited signatures of latitude-associated selection. Our results indicate that in species with sex-biased dispersal, philopatry can facilitate sorting of locally adaptive variation, with the dispersing sex facilitating movement of potentially adaptive variation among locations and environments.


Author(s):  
David S Portnoy ◽  
Jonathan B Puritz ◽  
Christopher M Hollenbeck ◽  
James Gelsleichter ◽  
Demian Chapman ◽  
...  

Sex-biased dispersal is expected to homogenize nuclear genetic variation relative to variation in genetic material inherited through the philopatric sex. When site fidelity occurs across a heterogeneous environment, local selective regimes may alter this pattern. We assessed spatial patterns of variation in nuclear-encoded, single nucleotide polymorphisms (SNPs) and sequences of the mitochondrial control region in bonnethead sharks (Sphyrna tiburo) collected, a species thought to exhibit female philopatry, from summer habitat used for gestation. Geographic patterns of mtDNA haplotypes and putatively neutral SNPs confirmed female philopatry and male-mediated gene flow along the northeastern coast of the Gulf of Mexico. A total of 30 outlier SNP loci were identified; alleles at over half of these loci exhibited signatures of latitude-associated selection. Our results indicate that in species with sex-biased dispersal, philopatry can facilitate sorting of locally adaptive variation, with the dispersing sex facilitating movement of potentially adaptive variation among locations and environments.


Author(s):  
David S Portnoy ◽  
Jonathan B Puritz ◽  
Christopher M Hollenbeck ◽  
James Gelsleichter ◽  
Demian Chapman ◽  
...  

Sex-biased dispersal is expected to homogenize nuclear genetic variation relative to variation in genetic material inherited through the philopatric sex. When site fidelity occurs across a heterogeneous environment, local selective regimes may alter this pattern. We assessed spatial patterns of variation in nuclear-encoded, single nucleotide polymorphisms (SNPs) and sequences of the mitochondrial control region in bonnethead sharks (Sphyrna tiburo) collected, a species thought to exhibit female philopatry, from summer habitat used for gestation. Geographic patterns of mtDNA haplotypes and putatively neutral SNPs confirmed female philopatry and male-mediated gene flow along the northeastern coast of the Gulf of Mexico. A total of 30 outlier SNP loci were identified; alleles at over half of these loci exhibited signatures of latitude-associated selection. Our results indicate that in species with sex-biased dispersal, philopatry can facilitate sorting of locally adaptive variation, with the dispersing sex facilitating movement of potentially adaptive variation among locations and environments.


EDIS ◽  
2017 ◽  
Vol 2017 (3) ◽  
Author(s):  
Shelly A. Johnson ◽  
Timm Kroeger ◽  
Josh Horn ◽  
Alison E. Adams ◽  
Damian C. Adams

Animals in Florida provide a variety of benefits to people, from recreation (fishing, hunting, or wildlife viewing) to protection of human life and property (oysters and corals provide reef structures that help protect coasts from erosion and flooding). By measuring the economic value of these benefits, we can assign a monetary value to the habitats that sustain these species and assess the value that is lost when development or other human-based activities degrade animal habitat. This 5-page fact sheet presents the results of a study that assessed the value of protecting five animal species in Florida and showed the economic value of protecting animal habitat.


2011 ◽  
Vol 29 (1-2) ◽  
pp. 10-12 ◽  
Author(s):  
T. N. Kaye ◽  
R. Schwindt ◽  
C. Menke

Climate ◽  
2021 ◽  
Vol 9 (6) ◽  
pp. 97
Author(s):  
Abdullah Al-Maruf ◽  
J. Craig Jenkins ◽  
Amelie Bernzen ◽  
Boris Braun

The main objective of this paper is to measure the level of household resilience to cyclone and storm surges in the coastal area of Bangladesh. We draw on four general disaster frameworks in terms of addressing household-level resilience to cyclones and storm surges. We use a composite indicator approach organized around four components: (1) household infrastructure (HI); (2) household economic capacity (HEC); (3) household self-organization and learning (HSoL), and; (4) social safety nets (SSN). Drawing on a household survey (N = 1188) in nine coastal union parishads in coastal Bangladesh purposively selected as among the most vulnerable places in the world, we use principal components analysis applied to a standardized form of the survey data that identifies key household resilience features. These household index scores can be used for the assessment and monitoring of household capacities, training, and other efforts to improve household cyclone resilience. Our innovative methodological approach allows us to (a) identify patterns and reveal the underlying factors that accurately describe the variation in the data; (b) reduce a large number of variables to a much smaller number of core dimensions of household resilience, and (c) to detect spatial variations in resilience among communities. Aggregated to the community level, our new index reveals significant differences in community cyclone resilience in different areas of the coastal region. In this way, we can show that shoreline and island communities, in particular, have significant deficits in terms of household resilience, which seem to be mutually reinforcing one another and making for lower resilience.


Sign in / Sign up

Export Citation Format

Share Document