scholarly journals A genome scan for selection signatures comparing farmed Atlantic salmon with two wild populations: Testing colocalization among outlier markers, candidate genes, and quantitative trait loci for production traits

2016 ◽  
Vol 10 (3) ◽  
pp. 276-296 ◽  
Author(s):  
Lei Liu ◽  
Keng Pee Ang ◽  
J. A. K. Elliott ◽  
Matthew Peter Kent ◽  
Sigbjørn Lien ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Atlantic Salmon ◽  
Candidate Genes ◽  
Quantitative Trait ◽  
Genome Scan ◽  
Production Traits ◽  
Wild Populations ◽  
Selection Signatures ◽  
A Genome ◽  
Farmed Atlantic Salmon

scholarly journals A Genome Scan for Quantitative Trait Locus by Environment Interactions for Production Traits

2007 ◽  
Vol 90 (7) ◽  
pp. 3482-3489 ◽  
Author(s):  
M. Lillehammer ◽  
M. Árnyasi ◽  
S. Lien ◽  
H.G. Olsen ◽  
E. Sehested ◽  
...  
Keyword(s):  
Quantitative Trait Locus ◽  
Quantitative Trait ◽  
Genome Scan ◽  
Production Traits ◽  
A Genome ◽  
Trait Locus

scholarly journals Meta-Analysis of Quantitative Trait Loci Associated with Seedling-Stage Salt Tolerance in Rice (Oryza sativa L.)

Plants ◽  
2019 ◽  
Vol 8 (2) ◽  
pp. 33 ◽  
Author(s):  
Md. Islam ◽  
John Ontoy ◽  
Prasanta Subudhi
Keyword(s):  
Quantitative Trait Loci ◽  
Salt Tolerance ◽  
Candidate Genes ◽  
Quantitative Trait ◽  
Oryza Sativa L ◽  
Meta Analysis ◽  
Seedling Stage ◽  
Phenotypic Variance ◽  
A Genome ◽  
Trait Loci

Soil and water salinity is one of the major abiotic stresses that reduce growth and productivity in major food crops including rice. The lack of congruence of salt tolerance quantitative trait loci (QTLs) in multiple genetic backgrounds and multiple environments is a major hindrance for undertaking marker-assisted selection (MAS). A genome-wide meta-analysis of QTLs controlling seedling-stage salt tolerance was conducted in rice using QTL information from 12 studies. Using a consensus map, 11 meta-QTLs for three traits with smaller confidence intervals were localized on chromosomes 1 and 2. The phenotypic variance of 3 meta-QTLs was ≥20%. Based on phenotyping of 56 diverse genotypes and breeding lines, six salt-tolerant genotypes (Bharathy, I Kung Ban 4-2 Mutant, Langmanbi, Fatehpur 3, CT-329, and IARI 5823) were identified. The perusal of the meta-QTL regions revealed several candidate genes associated with salt-tolerance attributes. The lack of association between meta-QTL linked markers and the level of salt tolerance could be due to the low resolution of meta-QTL regions and the genetic complexity of salt tolerance. The meta-QTLs identified in this study will be useful not only for MAS and pyramiding, but will also accelerate the fine mapping and cloning of candidate genes associated with salt-tolerance mechanisms in rice.

scholarly journals A genome scan for quantitative trait loci affecting cyanogenic potential of cassava root in an outbred population

BMC Genomics ◽  
2011 ◽  
Vol 12 (1) ◽  
Author(s):  
Sukhuman Whankaew ◽  
Supannee Poopear ◽  
Supanath Kanjanawattanawong ◽  
Sithichoke Tangphatsornruang ◽  
Opas Boonseng ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Quantitative Trait ◽  
Genome Scan ◽  
Outbred Population ◽  
Cassava Root ◽  
A Genome ◽  
Trait Loci ◽  
Cyanogenic Potential

scholarly journals A Genome Scan for Quantitative Trait Loci Affecting Milk Production in Norwegian Dairy Cattle

2002 ◽  
Vol 85 (11) ◽  
pp. 3124-3130 ◽  
Author(s):  
H.G. Olsen ◽  
L. Gomez-Raya ◽  
D.I. Våge ◽  
I. Olsaker ◽  
H. Klungland ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Dairy Cattle ◽  
Milk Production ◽  
Quantitative Trait ◽  
Genome Scan ◽  
A Genome ◽  
Trait Loci ◽  
Norwegian Dairy

scholarly journals A genome scan for quantitative trait loci affecting body conformation traits in Spanish Churra dairy sheep

2011 ◽  
Vol 94 (8) ◽  
pp. 4119-4128 ◽  
Author(s):  
B. Gutiérrez-Gil ◽  
L. Alvarez ◽  
L.F. de la Fuente ◽  
J.P. Sanchez ◽  
F. San Primitivo ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Quantitative Trait ◽  
Genome Scan ◽  
Dairy Sheep ◽  
Body Conformation ◽  
A Genome ◽  
Trait Loci

A genome scan for quantitative trait loci affecting resistance to Trichostrongylus colubriformis in sheep

2002 ◽  
Vol 33 (2) ◽  
pp. 97-106 ◽  
Author(s):  
K. J. Beh ◽  
D. J. Hulme ◽  
M. J. Callaghan ◽  
Z. Leish ◽  
I. Lenane ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Quantitative Trait ◽  
Genome Scan ◽  
Trichostrongylus Colubriformis ◽  
A Genome ◽  
Trait Loci

A genome scan for quantitative trait loci influencing carcass, post-natal growth and reproductive traits in commercial Angus cattle

2010 ◽  
Vol 41 (6) ◽  
pp. 597-607 ◽  
Author(s):  
M. C. McClure ◽  
N. S. Morsci ◽  
R. D. Schnabel ◽  
J. W. Kim ◽  
P. Yao ◽  
...  
Keyword(s):  
Quantitative Trait Loci ◽  
Quantitative Trait ◽  
Reproductive Traits ◽  
Genome Scan ◽  
Angus Cattle ◽  
A Genome ◽  
Trait Loci
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