Estimation of variance components for carcass traits in Japanese Black cattle using 50K SNP genotype data

2013 ◽  
Vol 85 (1) ◽  
pp. 1-7 ◽  
Author(s):  
Toshio Watanabe ◽  
Hirokazu Matsuda ◽  
Aisaku Arakawa ◽  
Takahisa Yamada ◽  
Hiroaki Iwaisaki ◽  
...  
Keyword(s):  
Variance Components ◽  
Carcass Traits ◽  
Genotype Data ◽  
Japanese Black Cattle ◽  
Estimation Of Variance

Estimation of variance and genomic prediction using genotypes imputed from low-density marker subsets for carcass traits in Japanese black cattle

2015 ◽  
Vol 87 (9) ◽  
pp. 1106-1113 ◽  
Author(s):  
Shinichiro Ogawa ◽  
Hirokazu Matsuda ◽  
Yukio Taniguchi ◽  
Toshio Watanabe ◽  
Yoshikazu Sugimoto ◽  
...  
Keyword(s):  
Genomic Prediction ◽  
Carcass Traits ◽  
Low Density ◽  
Japanese Black Cattle ◽  
Estimation Of Variance ◽  
Density Marker

Estimation of variance components in normal linear mixed models with additivity

2015 ◽  
Author(s):  
Dário Ferreira ◽  
Sandra S. Ferreira ◽  
Célia Nunes ◽  
João T. Mexia
Keyword(s):  
Mixed Models ◽  
Variance Components ◽  
Linear Mixed Models ◽  
Estimation Of Variance

Effect of mitochondrial DNA variation on carcass traits of Japanese Black cattle.

1998 ◽  
Vol 76 (1) ◽  
pp. 36 ◽  
Author(s):  
H Mannen ◽  
T Kojima ◽  
K Oyama ◽  
F Mukai ◽  
T Ishida ◽  
...  
Keyword(s):  
Mitochondrial Dna ◽  
Carcass Traits ◽  
Japanese Black Cattle ◽  
Dna Variation

scholarly journals Estimation of variance components, genetic parameters and genetic trends for litter size of swines

2010 ◽  
Vol 39 (10) ◽  
pp. 2155-2159 ◽  
Author(s):  
Leandro Barbosa ◽  
Paulo Sávio Lopes ◽  
Adair José Regazzi ◽  
Robledo de Almeida Torres ◽  
Mário Luiz Santana Júnior ◽  
...  
Keyword(s):  
Litter Size ◽  
Variance Components ◽  
Genetic Parameters ◽  
Random Effect ◽  
Additive Model ◽  
Fixed Effect ◽  
Likelihood Method ◽  
Phenotypic Variance ◽  
Estimation Of Variance ◽  
Genetic Trends

Records of Large White breed animals were used to estimate variance components, genetic parameters and trends for the character total number of born piglets (TNBP) as measure of litter size. For obtaining variance components and genetic parameters, it was used the Restricted Maximum Likelihood Method using MTDFREML software. Two mixed models (additive and repeatability) were evaluated. The additive model contained fixed effect of the contemporary group and the following random effects: direct additive genetic and residual effect for the first parturition. Repeatability model had the same effects of the additive model plus parturition order fixed effect and non-correlated animal permanent environment random effect for the second, third and forth parturition. Direct additive heritability estimates for TNBP were 0.15 and 0.20 for the additive and repeatability models, respectively. The estimate of the ration among variance of the non-correlated effect of animal permanent environment effect and the phenotypic variance, expressed as total variance proportion (c2) was 0.09. The estimates of yearly genetic trends obtained in the additive and repeatability models have similar behaviors (0.02 piglets/sow/year).

scholarly journals Estimation of variance components of milk, fat, and protein yields of Tunisian Holstein dairy cattle using Bayesian and REML methods

2016 ◽  
Vol 59 (2) ◽  
pp. 243-248 ◽  
Author(s):  
Hafedh Ben Zaabza ◽  
Abderrahmen Ben Gara ◽  
Hedi Hammami ◽  
Mohamed Amine Ferchichi ◽  
Boulbaba Rekik
Keyword(s):  
Dairy Cattle ◽  
Bayesian Methods ◽  
Milk Fat ◽  
Variance Components ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
Bayesian Procedure ◽  
Milk Traits ◽  
Residual Variances ◽  
Estimation Of Variance

Abstract. A multi-trait repeatability animal model under restricted maximum likelihood (REML) and Bayesian methods was used to estimate genetic parameters of milk, fat, and protein yields in Tunisian Holstein cows. The estimates of heritability for milk, fat, and protein yields from the REML procedure were 0.21 ± 0.05, 0.159 ± 0.04, and 0.158 ± 0.04, respectively. The corresponding results from the Bayesian procedure were 0.273 ± 0.02, 0.198 ± 0.01, and 0.187 ± 0.01. Heritability estimates tended to be larger via the Bayesian than those obtained by the REML method. Genetic and permanent environmental variances estimated by REML were smaller than those obtained by the Bayesian analysis. Inversely, REML estimates of the residual variances were larger than Bayesian estimates. Genetic and permanent correlation estimates were on the other hand comparable by both REML and Bayesian methods with permanent environmental being larger than genetic correlations. Results from this study confirm previous reports on genetic parameters for milk traits in Tunisian Holsteins and suggest that a multi-trait approach can be an alternative for implementing a routine genetic evaluation of the Tunisian dairy cattle population.

Sign in / Sign up

Export Citation Format

Share Document