scholarly journals Building a Natural Language Processing Tool to Identify Patients With High Clinical Suspicion for Kawasaki Disease from Emergency Department Notes

2016 ◽  
Vol 23 (5) ◽  
pp. 628-636 ◽  
Author(s):  
Son Doan ◽  
Cleo K. Maehara ◽  
Juan D. Chaparro ◽  
Sisi Lu ◽  
Ruiling Liu ◽  
...  
2021 ◽  
Author(s):  
Xinxu Shen ◽  
Troy Houser ◽  
David Victor Smith ◽  
Vishnu P. Murty

The use of naturalistic stimuli, such as narrative movies, is gaining popularity in many fields, characterizing memory, affect, and decision-making. Narrative recall paradigms are often used to capture the complexity and richness of memory for naturalistic events. However, scoring narrative recalls is time-consuming and prone to human biases. Here, we show the validity and reliability of using a natural language processing tool, the Universal Sentence Encoder (USE), to automatically score narrative recall. We compared the reliability in scoring made between two independent raters (i.e., hand-scored) and between our automated algorithm and individual raters (i.e., automated) on trial-unique, video clips of magic tricks. Study 1 showed that our automated segmentation approaches yielded high reliability and reflected measures yielded by hand-scoring, and further that the results using USE outperformed another popular natural language processing tool, GloVe. In study two, we tested whether our automated approach remained valid when testing individual’s varying on clinically-relevant dimensions that influence episodic memory, age and anxiety. We found that our automated approach was equally reliable across both age groups and anxiety groups, which shows the efficacy of our approach to assess narrative recall in large-scale individual difference analysis. In sum, these findings suggested that machine learning approaches implementing USE are a promising tool for scoring large-scale narrative recalls and perform individual difference analysis for research using naturalistic stimuli.


2017 ◽  
Vol 56 (05) ◽  
pp. 377-389 ◽  
Author(s):  
Xingyu Zhang ◽  
Joyce Kim ◽  
Rachel E. Patzer ◽  
Stephen R. Pitts ◽  
Aaron Patzer ◽  
...  

SummaryObjective: To describe and compare logistic regression and neural network modeling strategies to predict hospital admission or transfer following initial presentation to Emergency Department (ED) triage with and without the addition of natural language processing elements.Methods: Using data from the National Hospital Ambulatory Medical Care Survey (NHAMCS), a cross-sectional probability sample of United States EDs from 2012 and 2013 survey years, we developed several predictive models with the outcome being admission to the hospital or transfer vs. discharge home. We included patient characteristics immediately available after the patient has presented to the ED and undergone a triage process. We used this information to construct logistic regression (LR) and multilayer neural network models (MLNN) which included natural language processing (NLP) and principal component analysis from the patient’s reason for visit. Ten-fold cross validation was used to test the predictive capacity of each model and receiver operating curves (AUC) were then calculated for each model.Results: Of the 47,200 ED visits from 642 hospitals, 6,335 (13.42%) resulted in hospital admission (or transfer). A total of 48 principal components were extracted by NLP from the reason for visit fields, which explained 75% of the overall variance for hospitalization. In the model including only structured variables, the AUC was 0.824 (95% CI 0.818-0.830) for logistic regression and 0.823 (95% CI 0.817-0.829) for MLNN. Models including only free-text information generated AUC of 0.742 (95% CI 0.7310.753) for logistic regression and 0.753 (95% CI 0.742-0.764) for MLNN. When both structured variables and free text variables were included, the AUC reached 0.846 (95% CI 0.839-0.853) for logistic regression and 0.844 (95% CI 0.836-0.852) for MLNN.Conclusions: The predictive accuracy of hospital admission or transfer for patients who presented to ED triage overall was good, and was improved with the inclusion of free text data from a patient’s reason for visit regardless of modeling approach. Natural language processing and neural networks that incorporate patient-reported outcome free text may increase predictive accuracy for hospital admission.


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