Pure Parsimony Xor Haplotyping

Paola Bonizzoni; Gianluca Della Vedova; Riccardo Dondi; Yuri Pirola; Romeo Rizzi

doi:10.1109/tcbb.2010.52

Pure Parsimony Xor Haplotyping

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2010.52 ◽

2010 ◽

Vol 7 (4) ◽

pp. 598-610 ◽

Cited By ~ 3

Author(s):

Paola Bonizzoni ◽

Gianluca Della Vedova ◽

Riccardo Dondi ◽

Yuri Pirola ◽

Romeo Rizzi

Keyword(s):

Pure Parsimony

Download Full-text

Haplotype inference by pure-parsimony using revamped delayed haplotype selection. (c2011)

10.26756/th.2011.19 ◽

2011 ◽

Author(s):

Raymond Abdallah

Keyword(s):

Haplotype Inference ◽

Pure Parsimony

Download Full-text

Haplotyping populations by pure parsimony based on compatible genotypes and greedy heuristics

Applied Mathematics and Computation ◽

10.1016/j.amc.2011.04.073 ◽

2011 ◽

Vol 217 (23) ◽

pp. 9798-9809 ◽

Cited By ~ 1

Author(s):

I-Lin Wang ◽

Hui-E Yang

Keyword(s):

Greedy Heuristics ◽

Pure Parsimony

Download Full-text

A Preprocessing Procedure for Haplotype Inference by Pure Parsimony

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2010.125 ◽

2011 ◽

Vol 8 (5) ◽

pp. 1183-1195 ◽

Cited By ~ 3

Author(s):

E. Irurozki ◽

B. Calvo ◽

J. A. Lozano

Keyword(s):

Haplotype Inference ◽

Pure Parsimony

Download Full-text

Haplotyping Populations by Pure Parsimony: Complexity of Exact and Approximation Algorithms

INFORMS Journal on Computing ◽

10.1287/ijoc.1040.0085 ◽

2004 ◽

Vol 16 (4) ◽

pp. 348-359 ◽

Cited By ~ 89

Author(s):

Giuseppe Lancia ◽

Maria Cristina Pinotti ◽

Romeo Rizzi

Keyword(s):

Approximation Algorithms ◽

Pure Parsimony

Download Full-text

Stochastic local search for large-scale instances of the haplotype inference problem by pure parsimony

Journal of Algorithms ◽

10.1016/j.jalgor.2008.02.004 ◽

2008 ◽

Vol 63 (1-3) ◽

pp. 55-69 ◽

Cited By ~ 13

Author(s):

Luca Di Gaspero ◽

Andrea Roli

Keyword(s):

Local Search ◽

Large Scale ◽

Haplotype Inference ◽

Stochastic Local Search ◽

Inference Problem ◽

Pure Parsimony

Download Full-text

Integer Programming Approaches to Haplotype Inference by Pure Parsimony

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2006.24 ◽

2006 ◽

Vol 3 (2) ◽

pp. 141-154 ◽

Cited By ~ 54

Author(s):

D.G. Brown ◽

I.M. Harrower

Keyword(s):

Integer Programming ◽

Haplotype Inference ◽

Pure Parsimony

Download Full-text

A Class Representative Model for Pure Parsimony Haplotyping under Uncertain Data

PLoS ONE ◽

10.1371/journal.pone.0017937 ◽

2011 ◽

Vol 6 (3) ◽

pp. e17937 ◽

Cited By ~ 1

Author(s):

Daniele Catanzaro ◽

Martine Labbé ◽

Luciano Porretta

Keyword(s):

Uncertain Data ◽

Representative Model ◽

Pure Parsimony ◽

Class Representative

Download Full-text

A GRASP-based approach for the Pure Parsimony Haplotype Inference problem

2010 2nd Computer Science and Electronic Engineering Conference (CEEC) ◽

10.1109/ceec.2010.5606481 ◽

2010 ◽

Author(s):

Radoslaw Suchecki ◽

Pierre Chardaire ◽

Katharina T. Huber

Keyword(s):

Haplotype Inference ◽

Inference Problem ◽

Pure Parsimony

Download Full-text