Generalized Gene Adjacencies, Graph Bandwidth, and Clusters in Yeast Evolution

2009 ◽  
Vol 6 (2) ◽  
pp. 213-220 ◽  
Author(s):  
Qian Zhu ◽  
Z. Adam ◽  
V. Choi ◽  
D. Sankoff
Keyword(s):  
Yeast Evolution

YEAST EVOLUTION AND COMPARATIVE GENOMICS

2005 ◽  
Vol 59 (1) ◽  
pp. 135-153 ◽  
Author(s):  
Gianni Liti ◽  
Edward J. Louis
Keyword(s):  
Comparative Genomics ◽  
Yeast Evolution

scholarly journals Domestication reprogrammed the budding yeast life cycle

2020 ◽  
Author(s):  
Matteo De Chiara ◽  
Benjamin Barré ◽  
Karl Persson ◽  
Amadi Onyetuga Chioma ◽  
Agurtzane Irizar ◽  
...  
Keyword(s):  
Life Cycle ◽  
Evolutionary History ◽  
Budding Yeast ◽  
World Population ◽  
Model Species ◽  
Quiescent Cells ◽  
Gamete Formation ◽  
The World ◽  
Wild Yeasts ◽  
Yeast Evolution

AbstractDomestication of plants and animals is the foundation for feeding the world population. We report that domestication of the model yeast S. cerevisiae reprogrammed its life cycle entirely. We tracked growth, gamete formation and cell survival across many environments for nearly 1000 genome sequenced isolates and found a remarkable dichotomy between domesticated and wild yeasts. Wild yeasts near uniformly trigger meiosis and sporulate when encountering nutrient depletions, whereas domestication relaxed selection on sexual reproduction and favoured survival as quiescent cells. Domestication also systematically enhanced fermentative over respiratory traits while decreasing stress tolerance. We show that this yeast domestication syndrome was driven by aneuploidies and gene function losses that emerged independently in multiple domesticated lineages during the specie’s recent evolutionary history. We found domestication to be the most dramatic event in budding yeast evolution, raising questions on how much domestication has distorted our understanding of this key model species.

scholarly journals Ploidy Controls the Success of Mutators and Nature of Mutations during Budding Yeast Evolution

2006 ◽  
Vol 16 (16) ◽  
pp. 1581-1590 ◽  
Author(s):  
Dawn A. Thompson ◽  
Michael M. Desai ◽  
Andrew W. Murray
Keyword(s):  
Budding Yeast ◽  
Yeast Evolution

scholarly journals Stochastic signalling rewires the interaction map of a multiple feedback network during yeast evolution

2012 ◽  
Vol 3 (1) ◽  
Author(s):  
Chieh Hsu ◽  
Simone Scherrer ◽  
Antoine Buetti-Dinh ◽  
Prasuna Ratna ◽  
Julia Pizzolato ◽  
...  
Keyword(s):  
Feedback Network ◽  
Interaction Map ◽  
Yeast Evolution

scholarly journals New Sequencing Tools Give a Close Look at Yeast Evolution

2014 ◽  
Vol 31 (4) ◽  
pp. 1056-1057
Author(s):  
J. Caspermeyer
Keyword(s):  
Yeast Evolution
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