The Large Scale Parallelization of a Conformational 3D Protein Structure Prediction Application

1998 ◽  
Author(s):  
P. LoCascio ◽  
Kaizhi Yue ◽  
P. Cummings ◽  
K. Dill
Keyword(s):  
Protein Structure ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
Large Scale ◽  
3D Protein Structure

scholarly journals Lessons from making the Structural Classification of Proteins (SCOP) and their implications for protein structure modelling

2016 ◽  
Vol 44 (3) ◽  
pp. 937-943 ◽  
Author(s):  
Antonina Andreeva
Keyword(s):  
Protein Structure ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
Large Scale ◽  
Structural Variations ◽  
Structural Classification ◽  
Alternative Structures ◽  
Genome Annotations ◽  
Structural Classification Of Proteins

The Structural Classification of Proteins (SCOP) database has facilitated the development of many tools and algorithms and it has been successfully used in protein structure prediction and large-scale genome annotations. During the development of SCOP, numerous exceptions were found to topological rules, along with complex evolutionary scenarios and peculiarities in proteins including the ability to fold into alternative structures. This article reviews cases of structural variations observed for individual proteins and among groups of homologues, knowledge of which is essential for protein structure modelling.

scholarly journals 3D Protein structure prediction with genetic tabu search algorithm

2010 ◽  
Vol 4 (S1) ◽  
Author(s):  
Xiaolong Zhang ◽  
Ting Wang ◽  
Huiping Luo ◽  
Jack Y Yang ◽  
Youping Deng ◽  
...  
Keyword(s):  
Protein Structure ◽  
Tabu Search ◽  
Protein Structure Prediction ◽  
Structure Prediction ◽  
Search Algorithm ◽  
Tabu Search Algorithm ◽  
3D Protein Structure
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