scholarly journals Respawn: A Distributed Multi-resolution Time-Series Datastore

Author(s):  
Maxim Buevich ◽  
Anne Wright ◽  
Randy Sargent ◽  
Anthony Rowe
Keyword(s):  
mSystems ◽  
2020 ◽  
Vol 5 (4) ◽  
Author(s):  
Hsiao-Pei Lu ◽  
Yung-Hsien Shao ◽  
Jer-Horng Wu ◽  
Chih-hao Hsieh

ABSTRACT Performance of a bioreactor is affected by complex microbial consortia that regulate system functional processes. Studies so far, however, have mainly emphasized the selective pressures imposed by operational conditions (i.e., deterministic external physicochemical variables) on the microbial community as well as system performance, but have overlooked direct effects of the microbial community on system functioning. Here, using a bioreactor with ammonium as the sole substrate under controlled operational settings as a model system, we investigated succession of the bacterial community after a disturbance and its impact on nitrification and anammox (anaerobic ammonium oxidation) processes with fine-resolution time series data. System performance was quantified as the ratio of the fed ammonium converted to anammox-derived nitrogen gas (N2) versus nitrification-derived nitrate (npNO3−). After the disturbance, the N2/npNO3− ratio first decreased, then recovered, and finally stabilized until the end. Importantly, the dynamics of N2/npNO3− could not be fully explained by physicochemical variables of the system. In comparison, the proportion of variation that could be explained substantially increased (tripled) when the changes in bacterial composition were taken into account. Specifically, distinct bacterial taxa tended to dominate at different successional stages, and their relative abundances could explain up to 46% of the variation in nitrogen removal efficiency. These findings add baseline knowledge of microbial succession and emphasize the importance of monitoring the dynamics of microbial consortia for understanding the variability of system performance. IMPORTANCE Dynamics of microbial communities are believed to be associated with system functional processes in bioreactors. However, few studies have provided quantitative evidence. The difficulty of evaluating direct microbe-system relationships arises from the fact that system performance is affected by convolved effects of microbiota and bioreactor operational parameters (i.e., deterministic external physicochemical forcing). Here, using fine-resolution time series data (daily sampling for 2 months) under controlled operational settings, we performed an in-depth analysis of system performance as a function of the microbial community in the context of bioreactor physicochemical conditions. We obtained statistically evaluated results supporting the idea that monitoring microbial community dynamics could improve the ability to predict system functioning, beyond what could be explained by operational physicochemical variables. Moreover, our results suggested that considering the succession of multiple bacterial taxa would account for more system variation than focusing on any particular taxon, highlighting the need to integrate microbial community ecology for understanding system functioning.


2015 ◽  
Vol 16 (2) ◽  
pp. 548-562 ◽  
Author(s):  
Auguste Gires ◽  
Ioulia Tchiguirinskaia ◽  
Daniel Schertzer ◽  
Alexis Berne

Abstract Data collected during four heavy rainfall events that occurred in Ardèche (France) with the help of a 2D video disdrometer (2DVD) are used to investigate the structure of the raindrop distribution in both space and time. A first type of analysis is based on the reconstruction of 36-m-height vertical rainfall columns above the measuring device. This reconstruction is obtained with the help of a ballistic hypothesis applied to 1-ms time step series. The corresponding snapshots are analyzed with the help of universal multifractals. For comparison, a similar analysis is performed on the time series with 1-ms time steps, as well as on time series of accumulation maps of N consecutive recorded drops (therefore with variable time steps). It turns out that the drop distribution exhibits a good scaling behavior in the range 0.5–36 m during the heaviest portion of the events, confirming the lack of empirical evidence of the widely used homogenous assumption for drop distribution. For smaller scales, drop positions seem to be homogeneously distributed. The notion of multifractal singularity is well illustrated by the very high-resolution time series.


2015 ◽  
Vol 7 (10) ◽  
pp. 13208-13232 ◽  
Author(s):  
Nicolas Matton ◽  
Guadalupe Canto ◽  
François Waldner ◽  
Silvia Valero ◽  
David Morin ◽  
...  

Author(s):  
B. Liu ◽  
J. Chen ◽  
H. Xing ◽  
H. Wu ◽  
J. Zhang

The spatial detail and updating frequency of land cover data are important factors influencing land surface dynamic monitoring applications in high spatial resolution scale. However, the fragmentized patches and seasonal variable of some land cover types (e. g. small crop field, wetland) make it labor-intensive and difficult in the generation of land cover data. Utilizing the high spatial resolution multi-temporal image data is a possible solution. Unfortunately, the spatial and temporal resolution of available remote sensing data like Landsat or MODIS datasets can hardly satisfy the minimum mapping unit and frequency of current land cover mapping / updating at the same time. The generation of high resolution time series may be a compromise to cover the shortage in land cover updating process. One of popular way is to downscale multi-temporal MODIS data with other high spatial resolution auxiliary data like Landsat. But the usual manner of downscaling pixel based on a window may lead to the underdetermined problem in heterogeneous area, result in the uncertainty of some high spatial resolution pixels. Therefore, the downscaled multi-temporal data can hardly reach high spatial resolution as Landsat data. <br><br> A spiral based method was introduced to downscale low spatial and high temporal resolution image data to high spatial and high temporal resolution image data. By the way of searching the similar pixels around the adjacent region based on the spiral, the pixel set was made up in the adjacent region pixel by pixel. The underdetermined problem is prevented to a large extent from solving the linear system when adopting the pixel set constructed. With the help of ordinary least squares, the method inverted the endmember values of linear system. The high spatial resolution image was reconstructed on the basis of high spatial resolution class map and the endmember values band by band. Then, the high spatial resolution time series was formed with these high spatial resolution images image by image. <br><br> Simulated experiment and remote sensing image downscaling experiment were conducted. In simulated experiment, the 30 meters class map dataset Globeland30 was adopted to investigate the effect on avoid the underdetermined problem in downscaling procedure and a comparison between spiral and window was conducted. Further, the MODIS NDVI and Landsat image data was adopted to generate the 30m time series NDVI in remote sensing image downscaling experiment. Simulated experiment results showed that the proposed method had a robust performance in downscaling pixel in heterogeneous region and indicated that it was superior to the traditional window-based methods. The high resolution time series generated may be a benefit to the mapping and updating of land cover data.


2001 ◽  
Vol 5 (4) ◽  
pp. 645-652 ◽  
Author(s):  
B. Sivakumar

Abstract. This study of the behaviour of rainfall dynamics at different temporal scales identifies the type of approach most suitable for transformation of rainfall data from one scale to another. Rainfall data of four different temporal scales, i.e. daily, 2-day, 4-day and 8-day, observed over a period of about 25 years at the Leaf River basin, Mississippi, USA, are analysed. The correlation dimension method is employed to identify the behaviour of rainfall dynamics. The finite correlation dimensions obtained for the four rainfall series (4.82, 5.26, 6.42 and 8.87, respectively) indicate the possible existence of chaotic behaviour in the rainfall observed at the four scales. A possible implication of this might be that the rainfall processes at these scales are related through a chaotic (scale-invariant) behaviour. However, a comparison of the correlation dimension and coefficient of variation of each of the time series reveals an inverse relationship between the two (higher dimension for lower coefficient of variation and vice versa). The presence of a large number of zeros in the higher resolution time series (that could result in an underestimation of the dimension) and the possible presence of a higher level of noise in the lower resolution time series (that could result in an overestimation of the dimension) might account for such results. In view of these problems, it is concluded that the results must be verified using other chaos identification methods and the existence of chaos must be substantiated with additional evidence. Keywords: rainfall, chaos, scaling, correlation dimension, number of variables, coefficient of variation, data size, noise, zeros


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