Inferring human brain structural connectivity by eigen-decomposition based network deconvolution

2016 ◽  
Author(s):  
Qiu Zhengping ◽  
Chen Xue ◽  
Wang Yanjiang
Keyword(s):  
Human Brain ◽  
Structural Connectivity ◽  
Network Deconvolution ◽  
Eigen Decomposition

scholarly journals Insights into the Connectivity of the Human Brain Using DTI

2012 ◽  
Vol 1 (1) ◽  
pp. 78-91 ◽  
Author(s):  
S Kollias
Keyword(s):  
Human Brain ◽  
Molecular Diffusion ◽  
Diffusion Tensor ◽  
Wide Spectrum ◽  
Diffusion Imaging ◽  
Structural Connectivity ◽  
Nerve Tissue ◽  
Mammalian Brain ◽  
Fibre Direction

Diffusion tensor imaging (DTI) is a neuroimaging MR technique, which allows in vivo and non-destructive visualization of myeloarchitectonics in the neural tissue and provides quantitative estimates of WM integrity by measuring molecular diffusion. It is based on the phenomenon of diffusion anisotropy in the nerve tissue, in that water molecules diffuse faster along the neural fibre direction and slower in the fibre-transverse direction. On the basis of their topographic location, trajectory, and areas that interconnect the various fibre systems of the mammalian brain are divided into commissural, projectional and association fibre systems. DTI has opened an entirely new window on the white matter anatomy with both clinical and scientific applications. Its utility is found in both the localization and the quantitative assessment of specific neuronal pathways. The potential of this technique to address connectivity in the human brain is not without a few methodological limitations. A wide spectrum of diffusion imaging paradigms and computational tractography algorithms has been explored in recent years, which established DTI as promising new avenue, for the non-invasive in vivo mapping of structural connectivity at the macroscale level. Further improvements in the spatial resolution of DTI may allow this technique to be applied in the near future for mapping connectivity also at the mesoscale level. DOI: http://dx.doi.org/10.3126/njr.v1i1.6330 Nepalese Journal of Radiology Vol.1(1): 78-91

scholarly journals Group-Level Ranking-Based Hubness Analysis of Human Brain Connectome Reveals Significant Interhemispheric Asymmetry and Intraparcel Heterogeneities

2021 ◽  
Vol 15 ◽  
Author(s):  
Sahin Hanalioglu ◽  
Siyar Bahadir ◽  
Ilkay Isikay ◽  
Pinar Celtikci ◽  
Emrah Celtikci ◽  
...  
Keyword(s):  
Human Brain ◽  
Diffusion Imaging ◽  
Structural Connectivity ◽  
Population Level ◽  
Similar Distribution ◽  
Group Level ◽  
Imaging Data ◽  
Brain Connectome ◽  
Human Connectome Project ◽  
Intuitive Method

Objective: Graph theory applications are commonly used in connectomics research to better understand connectivity architecture and characterize its role in cognition, behavior and disease conditions. One of the numerous open questions in the field is how to represent inter-individual differences with graph theoretical methods to make inferences for the population. Here, we proposed and tested a simple intuitive method that is based on finding the correlation between the rank-ordering of nodes within each connectome with respect to a given metric to quantify the differences/similarities between different connectomes.Methods: We used the diffusion imaging data of the entire HCP-1065 dataset of the Human Connectome Project (HCP) (n = 1,065 subjects). A customized cortical subparcellation of HCP-MMP atlas (360 parcels) (yielding a total of 1,598 ROIs) was used to generate connectivity matrices. Six graph measures including degree, strength, coreness, betweenness, closeness, and an overall “hubness” measure combining all five were studied. Group-level ranking-based aggregation method (“measure-then-aggregate”) was used to investigate network properties on population level.Results: Measure-then-aggregate technique was shown to represent population better than commonly used aggregate-then-measure technique (overall rs: 0.7 vs 0.5). Hubness measure was shown to highly correlate with all five graph measures (rs: 0.88–0.99). Minimum sample size required for optimal representation of population was found to be 50 to 100 subjects. Network analysis revealed a widely distributed set of cortical hubs on both hemispheres. Although highly-connected hub clusters had similar distribution between two hemispheres, average ranking values of homologous parcels of two hemispheres were significantly different in 71% of all cortical parcels on group-level.Conclusion: In this study, we provided experimental evidence for the robustness, limits and applicability of a novel group-level ranking-based hubness analysis technique. Graph-based analysis of large HCP dataset using this new technique revealed striking hemispheric asymmetry and intraparcel heterogeneities in the structural connectivity of the human brain.

scholarly journals Comparing the temporal relationship of structural and functional connectivity changes in different adult human brain networks: a single-case study

2018 ◽  
Vol 3 ◽  
pp. 50 ◽  
Author(s):  
Takamitsu Watanabe ◽  
Geraint Rees
Keyword(s):  
Functional Connectivity ◽  
Human Brain ◽  
Large Scale ◽  
Single Case ◽  
Brain Networks ◽  
Structural Connectivity ◽  
Time Lags ◽  
Single Case Study ◽  
Adult Human

Background: Despite accumulated evidence for adult brain plasticity, the temporal relationships between large-scale functional and structural connectivity changes in human brain networks remain unclear. Methods: By analysing a unique richly detailed 19-week longitudinal neuroimaging dataset, we tested whether macroscopic functional connectivity changes lead to the corresponding structural alterations in the adult human brain, and examined whether such time lags between functional and structural connectivity changes are affected by functional differences between different large-scale brain networks. Results: In this single-case study, we report that, compared to attention-related networks, functional connectivity changes in default-mode, fronto-parietal, and sensory-related networks occurred in advance of modulations of the corresponding structural connectivity with significantly longer time lags. In particular, the longest time lags were observed in sensory-related networks. In contrast, such significant temporal differences in connectivity change were not seen in comparisons between anatomically categorised different brain areas, such as frontal and occipital lobes. These observations survived even after multiple validation analyses using different connectivity definitions or using parts of the datasets. Conclusions: Although the current findings should be examined in independent datasets with different demographic background and by experimental manipulation, this single-case study indicates the possibility that plasticity of macroscopic brain networks could be affected by cognitive and perceptual functions implemented in the networks, and implies a hierarchy in the plasticity of functionally different brain systems.

scholarly journals A Hybrid Communication Pattern in Brain Structural Network Revealed by Evolutionary Computation

2021 ◽  
Author(s):  
QUANMIN LIANG ◽  
Ying Lin ◽  
Zhengjia Dai ◽  
Junji Ma ◽  
Xitian Chen
Keyword(s):  
Human Brain ◽  
Structure Function ◽  
Structural Connectivity ◽  
Brain Regions ◽  
Communication Model ◽  
Functional Modules ◽  
Global Knowledge ◽  
Hybrid Routing ◽  
Routing Strategy ◽  
Functional Components

The human brain functional connectivity network (FCN) is constrained and shaped by the information communication processes in the structural connectivity network (SCN). The underlying communication model thus becomes a critical issue for understanding structure-function coupling in the human brain. A number of communication models featuring different point-to-point routing strategies have been proposed, with shortest path (SP), diffusion (DIF), and navigation (NAV) as the typical, respectively requiring network global knowledge, local knowledge, and their combination for path seeking. Yet these models all assumed the entire brain to use a uniform routing strategy, which contradicted lumping evidence supporting the wide variety of brain regions in both terms of biological substrates and functional exhibitions. In this study, we developed a novel communication model that allowed each brain region to choose a routing strategy from SP, DIF, and NAV independently. A genetic algorithm was designed to uncover the underlying region-wise hybrid routing strategy (namely HYB) for maximizing the structure-function coupling. The HYB-based model outperformed the three typical models in terms of predicting FCN and supporting robust communication. In HYB, brain regions in lower-order functional modules inclined to choose the routing strategies requiring more global knowledge, while those in higher-order functional components preferred to choose DIF. Additionally, compared to regions using SP and NAV, regions using DIF had denser structural connections, participated in more functional modules, but were less dominant within them. Together, our findings revealed and evidenced the possibility and advantages of hybrid routing underpinning efficient SCN communication.

High-Definition Fiber Tractography of the Human Brain

Neurosurgery ◽  
2012 ◽  
Vol 71 (2) ◽  
pp. 430-453 ◽  
Author(s):  
Juan C. Fernandez-Miranda ◽  
Sudhir Pathak ◽  
Johnathan Engh ◽  
Kevin Jarbo ◽  
Timothy Verstynen ◽  
...  
Keyword(s):  
White Matter ◽  
Human Brain ◽  
Structural Connectivity ◽  
Low Grade ◽  
Superior Cerebellar Peduncle ◽  
Fiber Tractography ◽  
Imaging Data ◽  
Thalamic Nuclei ◽  
High Definition ◽  
Diffusion Spectrum Imaging

Abstract BACKGROUND: High-definition fiber tracking (HDFT) is a novel combination of processing, reconstruction, and tractography methods that can track white matter fibers from cortex, through complex fiber crossings, to cortical and subcortical targets with subvoxel resolution. OBJECTIVE: To perform neuroanatomical validation of HDFT and to investigate its neurosurgical applications. METHODS: Six neurologically healthy adults and 36 patients with brain lesions were studied. Diffusion spectrum imaging data were reconstructed with a Generalized Q-Ball Imaging approach. Fiber dissection studies were performed in 20 human brains, and selected dissection results were compared with tractography. RESULTS: HDFT provides accurate replication of known neuroanatomical features such as the gyral and sulcal folding patterns, the characteristic shape of the claustrum, the segmentation of the thalamic nuclei, the decussation of the superior cerebellar peduncle, the multiple fiber crossing at the centrum semiovale, the complex angulation of the optic radiations, the terminal arborization of the arcuate tract, and the cortical segmentation of the dorsal Broca area. From a clinical perspective, we show that HDFT provides accurate structural connectivity studies in patients with intracerebral lesions, allowing qualitative and quantitative white matter damage assessment, aiding in understanding lesional patterns of white matter structural injury, and facilitating innovative neurosurgical applications. High-grade gliomas produce significant disruption of fibers, and low-grade gliomas cause fiber displacement. Cavernomas cause both displacement and disruption of fibers. CONCLUSION: Our HDFT approach provides an accurate reconstruction of white matter fiber tracts with unprecedented detail in both the normal and pathological human brain. Further studies to validate the clinical findings are needed.

scholarly journals ErbB4 Genotype Predicts Left Frontotemporal Structural Connectivity in Human Brain

2008 ◽  
Vol 34 (3) ◽  
pp. 641-650 ◽  
Author(s):  
Andreas Konrad ◽  
Goran Vucurevic ◽  
Francesco Musso ◽  
Peter Stoeter ◽  
Norbert Dahmen ◽  
...  
Keyword(s):  
Human Brain ◽  
Structural Connectivity

scholarly journals White matter maturation reshapes structural connectivity in the late developing human brain

2010 ◽  
Vol 107 (44) ◽  
pp. 19067-19072 ◽  
Author(s):  
P. Hagmann ◽  
O. Sporns ◽  
N. Madan ◽  
L. Cammoun ◽  
R. Pienaar ◽  
...  
Keyword(s):  
White Matter ◽  
Human Brain ◽  
Structural Connectivity ◽  
White Matter Maturation

scholarly journals Functionally linked resting-state networks reflect the underlying structural connectivity architecture of the human brain

2009 ◽  
Vol 30 (10) ◽  
pp. 3127-3141 ◽  
Author(s):  
Martijn P. van den Heuvel ◽  
René C.W. Mandl ◽  
René S. Kahn ◽  
Hilleke E. Hulshoff Pol
Keyword(s):  
Human Brain ◽  
Resting State ◽  
Structural Connectivity ◽  
Resting State Networks
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