A Novel High-Throughput Acceleration Engine for Read Alignment

2015 IEEE 23rd Annual International Symposium on Field-Programmable Custom Computing Machines ◽

10.1109/fccm.2015.27 ◽

2015 ◽

Cited By ~ 20

Author(s):

Yu-Ting Chen ◽

Jason Cong ◽

Jie Lei ◽

Peng Wei

Keyword(s):

High Throughput ◽

Read Alignment

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Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space

PeerJ ◽

10.7717/peerj.808 ◽

2015 ◽

Vol 3 ◽

pp. e808 ◽

Cited By ~ 16

Author(s):

Richard Wilton ◽

Tamas Budavari ◽

Ben Langmead ◽

Sarah J. Wheelan ◽

Steven L. Salzberg ◽

...

Keyword(s):

High Throughput ◽

Search Space ◽

Read Alignment

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Peer Review #2 of "Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space (v0.2)"

10.7287/peerj.808v0.2/reviews/2 ◽

2015 ◽

Author(s):

T Rognes

Keyword(s):

Peer Review ◽

High Throughput ◽

Search Space ◽

Read Alignment

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Peer Review #1 of "Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space (v0.1)"

10.7287/peerj.808v0.1/reviews/1 ◽

2015 ◽

Author(s):

J Köster

Keyword(s):

Peer Review ◽

High Throughput ◽

Search Space ◽

Read Alignment

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Peer Review #2 of "Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space (v0.1)"

10.7287/peerj.808v0.1/reviews/2 ◽

2015 ◽

Author(s):

T Rognes

Keyword(s):

Peer Review ◽

High Throughput ◽

Search Space ◽

Read Alignment

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High Throughput Short Read Alignment via Bi-directional BWT

2009 IEEE International Conference on Bioinformatics and Biomedicine ◽

10.1109/bibm.2009.42 ◽

2009 ◽

Cited By ~ 39

Author(s):

T. W. Lam ◽

Ruiqiang Li ◽

Alan Tam ◽

Simon Wong ◽

Edward Wu ◽

...

Keyword(s):

High Throughput ◽

Short Read ◽

Read Alignment ◽

Short Read Alignment

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Peer Review #1 of "Arioc: high-throughput read alignment with GPU-accelerated exploration of the seed-and-extend search space (v0.2)"

10.7287/peerj.808v0.2/reviews/1 ◽

2015 ◽

Author(s):

J Köster

Keyword(s):

Peer Review ◽

High Throughput ◽

Search Space ◽

Read Alignment

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High Throughput Screening Methods

10.1039/9781782626770 ◽

2016 ◽

Cited By ~ 4

Keyword(s):

High Throughput ◽

High Throughput Screening ◽

Screening Methods

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154: Integration of TPSA and High-Throughput Mass Spectrometry Data Improves Prostate Cancer Prediction

The Journal of Urology ◽

10.1016/s0022-5347(18)30419-1 ◽

2007 ◽

Vol 177 (4S) ◽

pp. 52-53

Author(s):

Stefano Ongarello ◽

Eberhard Steiner ◽

Regina Achleitner ◽

Isabel Feuerstein ◽

Birgit Stenzel ◽

...

Keyword(s):

Prostate Cancer ◽

Mass Spectrometry ◽

High Throughput ◽

Mass Spectrometry Data ◽

Cancer Prediction

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461: Increasing the Predictive Ability of Clinico-pathologic Markers for Prostate Cancer using Biomarkers Derived from High-Throughput Tissue Micorarray Studies in a Large Retrospective Cohort: A Stratification Strategy

The Journal of Urology ◽

10.1016/s0022-5347(18)34714-1 ◽

2005 ◽

Vol 173 (4S) ◽

pp. 126-126

Author(s):

Gustavo Ayala ◽

R. Li ◽

A. Frolov ◽

Michael Ittmann ◽

Hong Dai ◽

...

Keyword(s):

Prostate Cancer ◽

High Throughput ◽

Retrospective Cohort ◽

Predictive Ability

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Immunohistochemical features of early breast cancer in young women; a translational research project using high-throughput tissue microarray technology

European Journal of Cancer ◽

10.1016/s0959-8049(02)80347-1 ◽

2002 ◽

Vol 38 (11) ◽

pp. S108

Author(s):

J Van der Hage

Keyword(s):

Breast Cancer ◽

Translational Research ◽

Tissue Microarray ◽

Early Breast Cancer ◽

High Throughput ◽

Young Women ◽

Microarray Technology ◽

Research Project

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