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Exploring the impact of resource limitations on gene network reconstruction
2016 IEEE 55th Conference on Decision and Control (CDC)
◽
10.1109/cdc.2016.7798773
◽
2016
◽
Author(s):
Tyler Quarton
◽
Taek Kang
◽
Eduardo D. Sontag
◽
Leonidas Bleris
Keyword(s):
Gene Network
◽
Network Reconstruction
◽
Resource Limitations
◽
Gene Network Reconstruction
◽
The Impact
Download Full-text
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Cited By
References
Continuous Time Bayesian Networks for Gene Network Reconstruction: A Comparative Study on Time Course Data
Bioinformatics Research and Applications - Lecture Notes in Computer Science
◽
10.1007/978-3-319-08171-7_16
◽
2014
◽
pp. 176-187
◽
Cited By ~ 4
Author(s):
Enzo Acerbi
◽
Fabio Stella
Keyword(s):
Comparative Study
◽
Bayesian Networks
◽
Continuous Time
◽
Gene Network
◽
Time Course
◽
Network Reconstruction
◽
Continuous Time Bayesian Networks
◽
Gene Network Reconstruction
◽
Time Course Data
Download Full-text
Dynamic gene network reconstruction from gene expression data in mice after influenza A (H1N1) infection
Journal of Clinical Bioinformatics
◽
10.1186/2043-9113-1-27
◽
2011
◽
Vol 1
(1)
◽
pp. 27
◽
Cited By ~ 11
Author(s):
Konstantina Dimitrakopoulou
◽
Charalampos Tsimpouris
◽
George Papadopoulos
◽
Claudia Pommerenke
◽
Esther Wilk
◽
...
Keyword(s):
Gene Expression
◽
Gene Expression Data
◽
Influenza A
◽
Gene Network
◽
Network Reconstruction
◽
Expression Data
◽
H1n1 Infection
◽
Influenza A H1n1
◽
Gene Network Reconstruction
Download Full-text
Algorithm for the Construction of a Global Enzymatic Network to be used for Gene Network Reconstruction
Current Genomics
◽
10.2174/1389202915666140807004909
◽
2014
◽
Vol 15
(5)
◽
pp. 400-407
Author(s):
Andres Quintero
◽
Jorge Ramírez
◽
Luis Leal
◽
Liliana Lopez-Kleine
Keyword(s):
Gene Network
◽
Network Reconstruction
◽
Gene Network Reconstruction
Download Full-text
Gene Network Reconstruction by Integration of Prior Biological Knowledge
G3 Genes|Genome|Genetics
◽
10.1534/g3.115.018127
◽
2015
◽
Vol 5
(6)
◽
pp. 1075-1079
◽
Cited By ~ 17
Author(s):
Y. Li
◽
S. A. Jackson
Keyword(s):
Gene Network
◽
Network Reconstruction
◽
Biological Knowledge
◽
Prior Biological Knowledge
◽
Gene Network Reconstruction
Download Full-text
Exploiting causality in gene network reconstruction based on graph embedding
Machine Learning
◽
10.1007/s10994-019-05861-8
◽
2019
◽
Vol 109
(6)
◽
pp. 1231-1279
◽
Cited By ~ 6
Author(s):
Gianvito Pio
◽
Michelangelo Ceci
◽
Francesca Prisciandaro
◽
Donato Malerba
Keyword(s):
Gene Network
◽
Graph Embedding
◽
Network Reconstruction
◽
Gene Network Reconstruction
Download Full-text
Semi-Supervised Multi-View Learning for Gene Network Reconstruction
PLoS ONE
◽
10.1371/journal.pone.0144031
◽
2015
◽
Vol 10
(12)
◽
pp. e0144031
◽
Cited By ~ 26
Author(s):
Michelangelo Ceci
◽
Gianvito Pio
◽
Vladimir Kuzmanovski
◽
Sašo Džeroski
Keyword(s):
Gene Network
◽
Network Reconstruction
◽
Gene Network Reconstruction
Download Full-text
Gene network reconstruction reveals cell cycle and antiviral genes as major drivers of cervical cancer
Nature Communications
◽
10.1038/ncomms2693
◽
2013
◽
Vol 4
(1)
◽
Cited By ~ 48
Author(s):
Karina L. Mine
◽
Natalia Shulzhenko
◽
Anatoly Yambartsev
◽
Mark Rochman
◽
Gerdine F. O. Sanson
◽
...
Keyword(s):
Cell Cycle
◽
Cervical Cancer
◽
Gene Network
◽
Network Reconstruction
◽
Antiviral Genes
◽
Gene Network Reconstruction
Download Full-text
Gene network reconstruction from transcriptional dynamics under kinetic model uncertainty: a case for the second derivative
Bioinformatics
◽
10.1093/bioinformatics/btp028
◽
2009
◽
Vol 25
(6)
◽
pp. 772-779
◽
Cited By ~ 3
Author(s):
David R. Bickel
◽
Zahra Montazeri
◽
Pei-Chun Hsieh
◽
Mary Beatty
◽
Shai J. Lawit
◽
...
Keyword(s):
Kinetic Model
◽
Model Uncertainty
◽
Gene Network
◽
Network Reconstruction
◽
Second Derivative
◽
Transcriptional Dynamics
◽
Gene Network Reconstruction
Download Full-text
Neurotransmitter gene network reconstruction and analisis
Bioinformatics of Genome Regulation and Structure/ Systems Biology
◽
10.18699/bgrs/sb-2020-177
◽
2020
◽
Keyword(s):
Gene Network
◽
Network Reconstruction
◽
Gene Network Reconstruction
Download Full-text
Effect of imputation on gene network reconstruction from single-cell RNA-seq data
Patterns
◽
10.1016/j.patter.2021.100414
◽
2021
◽
pp. 100414
Author(s):
Lam-Ha Ly
◽
Martin Vingron
Keyword(s):
Single Cell
◽
Gene Network
◽
Network Reconstruction
◽
Rna Seq
◽
Gene Network Reconstruction
Download Full-text
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