scholarly journals Enabling Large Scale Data Production for OpenDose with GATE on the EGI Infrastructure

2019 ◽  
Author(s):  
Maxime Chauvin ◽  
Gilles Mathieu ◽  
Sorina Camarasu-Pop ◽  
Axel Bonnet ◽  
Manuel Bardies ◽  
...  
Keyword(s):  
Large Scale ◽  
Large Scale Data ◽  
Data Production ◽  
Scale Data

scholarly journals Sampling artifacts in single-cell genomics cohort studies

2020 ◽  
Author(s):  
Ramon Massoni-Badosa ◽  
Giovanni Iacono ◽  
Catia Moutinho ◽  
Marta Kulis ◽  
Núria Palau ◽  
...  
Keyword(s):  
Gene Expression ◽  
Cohort Studies ◽  
Single Cell ◽  
Large Scale ◽  
Chromatin Accessibility ◽  
Single Cell Genomics ◽  
Sampling Artifacts ◽  
Large Scale Data ◽  
Data Production ◽  
Scale Data

AbstractRobust protocols and automation now enable large-scale single-cell RNA and ATAC sequencing experiments and their application on biobank and clinical cohorts. However, technical biases introduced during sample acquisition can hinder solid, reproducible results and a systematic benchmarking is required before entering large-scale data production. Here, we report the existence and extent of gene expression and chromatin accessibility artifacts introduced during sampling and identify experimental and computational solutions for their prevention.

ProGen:Provenance database generator for large-scale data set

2009 ◽  
Vol 28 (11) ◽  
pp. 2737-2740
Author(s):  
Xiao ZHANG ◽  
Shan WANG ◽  
Na LIAN
Keyword(s):  
Large Scale ◽  
Data Set ◽  
Large Scale Data ◽  
Scale Data

COMMUNITY-CURATED DATA RESOURCES AND LARGE-SCALE DATA-MODEL SYNTHESES: THE CHILDREN OF COHMAP

2016 ◽  
Author(s):  
John W. Williams ◽  
◽  
Simon Goring ◽  
Eric Grimm ◽  
Jason McLachlan
Keyword(s):  
Data Model ◽  
Large Scale ◽  
Large Scale Data ◽  
Scale Data

scholarly journals Local and global approaches of affinity propagation clustering for large scale data

2008 ◽  
Vol 9 (10) ◽  
pp. 1373-1381 ◽  
Author(s):  
Ding-yin Xia ◽  
Fei Wu ◽  
Xu-qing Zhang ◽  
Yue-ting Zhuang
Keyword(s):  
Large Scale ◽  
Affinity Propagation ◽  
Large Scale Data ◽  
Affinity Propagation Clustering ◽  
Scale Data

scholarly journals A Framework for International Collaboration on ITER Using Large-Scale Data Transfer to Enable Near-Real-Time Analysis

2021 ◽  
Vol 77 (2) ◽  
pp. 98-108
Author(s):  
R. M. Churchill ◽  
C. S. Chang ◽  
J. Choi ◽  
J. Wong ◽  
S. Klasky ◽  
...  
Keyword(s):  
Real Time ◽  
International Collaboration ◽  
Large Scale ◽  
Data Transfer ◽  
Time Analysis ◽  
Real Time Analysis ◽  
Large Scale Data ◽  
Scale Data
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