scholarly journals Bridging dynamic regimes of segmental relaxation and center-of-mass diffusion in associative protein hydrogels

2020 ◽  
Vol 2 (4) ◽  
Author(s):  
Ameya Rao ◽  
Helen Yao ◽  
Bradley D. Olsen
Keyword(s):  
Center Of Mass ◽  
Mass Diffusion ◽  
Segmental Relaxation ◽  
Protein Hydrogels

scholarly journals Dynamics of proteins in solution

2019 ◽  
Vol 52 ◽  
Author(s):  
Marco Grimaldo ◽  
Felix Roosen-Runge ◽  
Fajun Zhang ◽  
Frank Schreiber ◽  
Tilo Seydel
Keyword(s):  
Protein Dynamics ◽  
Protein Function ◽  
Center Of Mass ◽  
Mass Diffusion ◽  
Transport Processes ◽  
Side Chain ◽  
Neutron Spectroscopy ◽  
Length Scales ◽  
Comprehensive Picture ◽  
Mechanistic Understanding

AbstractThe dynamics of proteins in solution includes a variety of processes, such as backbone and side-chain fluctuations, interdomain motions, as well as global rotational and translational (i.e. center of mass) diffusion. Since protein dynamics is related to protein function and essential transport processes, a detailed mechanistic understanding and monitoring of protein dynamics in solution is highly desirable. The hierarchical character of protein dynamics requires experimental tools addressing a broad range of time- and length scales. We discuss how different techniques contribute to a comprehensive picture of protein dynamics, and focus in particular on results from neutron spectroscopy. We outline the underlying principles and review available instrumentation as well as related analysis frameworks.

Two-Dimensional Center-of-Mass Diffusion of Lipid-Tethered Poly(2-methyl-2-oxazoline) at the Air–Water Interface Studied at the Single Molecule Level

Langmuir ◽  
2008 ◽  
Vol 24 (10) ◽  
pp. 5580-5584 ◽  
Author(s):  
Karin Lüdtke ◽  
Rainer Jordan ◽  
Nathan Furr ◽  
Sumit Garg ◽  
Kelsey Forsythe ◽  
...  
Keyword(s):  
Single Molecule ◽  
Center Of Mass ◽  
Mass Diffusion ◽  
Water Interface ◽  
Two Dimensional ◽  
Single Molecule Level ◽  
Air Water Interface

Center-of-mass diffusion of reptating polymer molecules

1984 ◽  
Vol 17 (6) ◽  
pp. 1284-1285 ◽  
Author(s):  
Douglas B. Adolf
Keyword(s):  
Center Of Mass ◽  
Mass Diffusion ◽  
Polymer Molecules

DETERMINATION OF THE MASS DIFFUSION COEFFICIENT OF H2O DILUTED IN N2 USING CLASSICAL MOLECULAR DYNAMIC SIMULATION

2020 ◽  
Vol 65 (6) ◽  
pp. 75-81
Author(s):  
Hoa Ngo Ngoc ◽  
Thu Le Minh ◽  
Trang Nguyen Huyen ◽  
Tuong Le Cong
Keyword(s):  
Diffusion Coefficient ◽  
Center Of Mass ◽  
Mass Diffusion ◽  
Auto Correlation ◽  
Classical Molecular Dynamic Simulation ◽  
Decay Times ◽  
Auto Correlation Function ◽  
Dynamics Simulations ◽  
Decay Behavior

In this work, the auto-correlation function of the center of mass velocity has been used to deduce the mass diffusion coefficient (D) of water diluted in nitrogen using the Classical Molecular Dynamics Simulations (CMDS). The calculations have been performed at room temperature (296 K) for different mixtures of H2O in N2 and 2.107 molecules from a five-sites potential. The results show that the auto-correlation functions expected exponential decay behavior [i.e. v v t exp( ) τ      ] and from the decay times τv , the mass diffusion coefficient and the velocity changing collisions frequency have been determined. The comparison between the CMDS results and experimental results are presented and discussed.

The Center of Mass Influences Normal Attentional Orienting

1994 ◽  
Author(s):  
Marcia Grabowecky ◽  
Lynn C. Robertson ◽  
Anne Treisman
Keyword(s):  
Center Of Mass ◽  
Attentional Orienting

Burgers fluid flow in perspective of Buongiorno’s model with improved heat and mass flux theory for stretching cylinder

2020 ◽  
Vol 92 (3) ◽  
pp. 31101
Author(s):  
Zahoor Iqbal ◽  
Masood Khan ◽  
Awais Ahmed
Keyword(s):  
Diffusion Process ◽  
Mathematical Formulation ◽  
Thermal Relaxation ◽  
Mass Diffusion ◽  
Stretching Cylinder ◽  
Discussion Section ◽  
Buongiorno’S Model ◽  
Homotopy Analysis ◽  
Burgers Fluid ◽  
Diffusion Phenomena

In this study, an effort is made to model the thermal conduction and mass diffusion phenomena in perspective of Buongiorno’s model and Cattaneo-Christov theory for 2D flow of magnetized Burgers nanofluid due to stretching cylinder. Moreover, the impacts of Joule heating and heat source are also included to investigate the heat flow mechanism. Additionally, mass diffusion process in flow of nanofluid is examined by employing the influence of chemical reaction. Mathematical modelling of momentum, heat and mass diffusion equations is carried out in mathematical formulation section of the manuscript. Homotopy analysis method (HAM) in Wolfram Mathematica is utilized to analyze the effects of physical dimensionless constants on flow, temperature and solutal distributions of Burgers nanofluid. Graphical results are depicted and physically justified in results and discussion section. At the end of the manuscript the section of closing remarks is also included to highlight the main findings of this study. It is revealed that an escalation in thermal relaxation time constant leads to ascend the temperature curves of nanofluid. Additionally, depreciation is assessed in mass diffusion process due to escalating amount of thermophoretic force constant.

Center of Mass Theorem and the Separation of Variables for Two-Body System on a Three-Dimensional Sphere

2020 ◽  
Vol 23 (3) ◽  
pp. 306-311
Author(s):  
Yu. Kurochkin ◽  
Dz. Shoukavy ◽  
I. Boyarina
Keyword(s):  
Constant Curvature ◽  
Jacobi Equation ◽  
Separation Of Variables ◽  
Center Of Mass ◽  
Three Dimensional ◽  
Relative Distance ◽  
Dimensional Sphere ◽  
Body System ◽  
Spaces Of Constant Curvature ◽  
Hamilton Jacobi Equation

The immobility of the center of mass in spaces of constant curvature is postulated based on its definition obtained in [1]. The system of two particles which interact through a potential depending only on the distance between particles on a three-dimensional sphere is considered. The Hamilton-Jacobi equation is formulated and its solutions and trajectory equations are found. It was established that the reduced mass of the system depends on the relative distance.

TO THE STABILITY OF TANK VEHICLES IN THE BRAKE MODE

2019 ◽  
pp. 27-32
Author(s):  
Denys Popelysh ◽  
Yurii Seluk ◽  
Sergyi Tomchuk
Keyword(s):  
Mathematical Model ◽  
Control Systems ◽  
Distribution Systems ◽  
Traffic Accidents ◽  
Road Traffic ◽  
Center Of Mass ◽  
Dynamic Processes ◽  
Course Stability ◽  
The Stability ◽  
Tank Vehicles

This article discusses the question of the possibility of improving the roll stability of partially filled tank vehicles while braking. We consider the dangers associated with partially filled tank vehicles. We give examples of the severe consequences of road traffic accidents that have occurred with tank vehicles carrying dangerous goods. We conducted an analysis of the dynamic processes of fluid flow in the tank and their influence on the basic parameters of the stability of vehicle. When transporting a partially filled tank due to the comparability of the mass of the empty tank with the mass of the fluid being transported, the dynamic qualities of the vehicle change so that they differ significantly from the dynamic characteristics of other vehicles. Due to large displacements of the center of mass of cargo in the tank there are additional loads that act vehicle and significantly reduce the course stability and the drivability. We consider the dynamics of liquid sloshing in moving containers, and give examples of building a mechanical model of an oscillating fluid in a tank and a mathematical model of a vehicle with a tank. We also considered the method of improving the vehicle’s stability, which is based on the prediction of the moment of action and the nature of the dynamic processes of liquid cargo and the implementation of preventive actions by executive mechanisms. Modern automated control systems (anti-lock brake system, anti-slip control systems, stabilization systems, braking forces distribution systems, floor level systems, etc.) use a certain list of elements for collecting necessary parameters and actuators for their work. This gives the ability to influence the course stability properties without interfering with the design of the vehicle only by making changes to the software of these systems. Keywords: tank vehicle, roll stability, mathematical model, vehicle control systems.

Exploring Baryon Rich Matter with Heavy-Ion Collisions

2019 ◽  
Vol 64 (7) ◽  
pp. 583 ◽  
Author(s):  
S. Harabasz
Keyword(s):  
Center Of Mass ◽  
Heavy Ion ◽  
State Density ◽  
Heavy Nuclei ◽  
First Order ◽  
Center Of Mass Energy ◽  
Ion Collisions ◽  
Deconfinement Phase Transition ◽  
Ground State Density

Collisions of heavy nuclei at (ultra-)relativistic energies provide a fascinating opportunity to re-create various forms of matter in the laboratory. For a short extent of time (10-22 s), matter under extreme conditions of temperature and density can exist. In dedicated experiments, one explores the microscopic structure of strongly interacting matter and its phase diagram. In heavy-ion reactions at SIS18 collision energies, matter is substantially compressed (2–3 times ground-state density), while moderate temperatures are reached (T < 70 MeV). The conditions closely resemble those that prevail, e.g., in neutron star mergers. Matter under such conditions is currently being studied at the High Acceptance DiElecton Spectrometer (HADES). Important topics of the research program are the mechanisms of strangeness production, the emissivity of matter, and the role of baryonic resonances herein. In this contribution, we will focus on the important experimental results obtained by HADES in Au+Au collisions at 2.4 GeV center-of-mass energy. We will also present perspectives for future experiments with HADES and CBM at SIS100, where higher beam energies and intensities will allow for the studies of the first-order deconfinement phase transition and its critical endpoint.

Sign in / Sign up

Export Citation Format

Share Document