Analysis of Affymetrix ChIP-Chip Data Using Starr and R/Bioconductor

2011 ◽  
Vol 2011 (5) ◽  
pp. pdb.top110-pdb.top110 ◽  
Author(s):  
B. Zacher ◽  
P. Torkler ◽  
A. Tresch
Keyword(s):  
Chip Data ◽  
Affymetrix Chip ◽  
Chip Chip

scholarly journals Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data

2010 ◽  
Vol 11 (1) ◽  
pp. 194 ◽  
Author(s):  
Benedikt Zacher ◽  
Pei Kuan ◽  
Achim Tresch
Keyword(s):  
Tiling Array ◽  
Array Analysis ◽  
Chip Data ◽  
Affymetrix Chip ◽  
Chip Chip

scholarly journals A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information

2011 ◽  
Vol 40 (7) ◽  
pp. e50-e50 ◽  
Author(s):  
Xiaotu Ma ◽  
Ashwinikumar Kulkarni ◽  
Zhihua Zhang ◽  
Zhenyu Xuan ◽  
Robert Serfling ◽  
...  
Keyword(s):  
Motif Discovery ◽  
Positional Information ◽  
Chip Data ◽  
Highly Efficient ◽  
Discovery Method ◽  
Chip Chip

scholarly journals De novo identification of in vivo binding sites from ChIP-chip data

2008 ◽  
Vol 9 (S7) ◽  
Author(s):  
Victor Jin ◽  
Alina Rabinovich ◽  
Henny O'Geen ◽  
Sushma Iyengar ◽  
Peggy Farnham
Keyword(s):  
Binding Sites ◽  
De Novo ◽  
Chip Data ◽  
In Vivo Binding ◽  
Chip Chip

Metaanalysis of ChIP-chip Data

2010 ◽  
pp. 185-207 ◽  
Author(s):  
Julia Engelhorn ◽  
Franziska Turck
Keyword(s):  
Chip Data ◽  
Chip Chip

scholarly journals An integrated workflow for analysis of ChIP-chip data

BioTechniques ◽  
2008 ◽  
Vol 45 (2) ◽  
pp. 131-140 ◽  
Author(s):  
Karin Weigelt ◽  
Christoph Moehle ◽  
Thomas Stempfl ◽  
Bernhard Weber ◽  
Thomas Langmann
Keyword(s):  
Chip Data ◽  
Chip Chip
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