scholarly journals PennCNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data

2007 ◽  
Vol 17 (11) ◽  
pp. 1665-1674 ◽  
Author(s):  
K. Wang ◽  
M. Li ◽  
D. Hadley ◽  
R. Liu ◽  
J. Glessner ◽  
...  
Keyword(s):  
High Resolution ◽  
Copy Number Variation ◽  
Markov Model ◽  
Hidden Markov Model ◽  
Copy Number ◽  
Hidden Markov ◽  
Snp Genotyping ◽  
Whole Genome ◽  
Number Variation ◽  
Copy Number Variation Detection

scholarly journals QuantiSNP: an Objective Bayes Hidden-Markov Model to detect and accurately map copy number variation using SNP genotyping data

2007 ◽  
Vol 35 (6) ◽  
pp. 2013-2025 ◽  
Author(s):  
Stefano Colella ◽  
Christopher Yau ◽  
Jennifer M. Taylor ◽  
Ghazala Mirza ◽  
Helen Butler ◽  
...  
Keyword(s):  
Copy Number Variation ◽  
Markov Model ◽  
Hidden Markov Model ◽  
Copy Number ◽  
Hidden Markov ◽  
Snp Genotyping ◽  
Objective Bayes ◽  
Number Variation

scholarly journals Comparison of Normalization Methods for Defining Copy Number Variation Using Whole-genome SNP Genotyping Data

2008 ◽  
Vol 6 (4) ◽  
pp. 231-234 ◽  
Author(s):  
Ji-Hong Kim ◽  
Seon-Hee Yim ◽  
Yong-Bok Jeong ◽  
Seong-Hyun Jung ◽  
Hai-Dong Xu ◽  
...  
Keyword(s):  
Copy Number Variation ◽  
Copy Number ◽  
Snp Genotyping ◽  
Whole Genome ◽  
Normalization Methods ◽  
Number Variation

scholarly journals Effective normalization for copy number variation detection from whole genome sequencing

BMC Genomics ◽  
2012 ◽  
Vol 13 (Suppl 6) ◽  
pp. S16 ◽  
Author(s):  
Angel Janevski ◽  
Vinay Varadan ◽  
Sitharthan Kamalakaran ◽  
Nilanjana Banerjee ◽  
Nevenka Dimitrova
Keyword(s):  
Copy Number Variation ◽  
Whole Genome Sequencing ◽  
Genome Sequencing ◽  
Copy Number ◽  
Whole Genome ◽  
Number Variation ◽  
Copy Number Variation Detection

Copy number variation detection using SNP genotyping arrays in three Chinese pig breeds

2015 ◽  
Vol 46 (2) ◽  
pp. 101-109 ◽  
Author(s):  
K. Dong ◽  
Y. Pu ◽  
N. Yao ◽  
G. Shu ◽  
X. Liu ◽  
...  
Keyword(s):  
Copy Number Variation ◽  
Copy Number ◽  
Snp Genotyping ◽  
Pig Breeds ◽  
Number Variation ◽  
Copy Number Variation Detection
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