Detecting genetic variation in microarray expression data

J. A. Greenhall; M. A. Zapala; M. Caceres; O. Libiger; C. Barlow; N. J. Schork; D. J. Lockhart

doi:10.1101/gr.6307307

Detecting genetic variation in microarray expression data

Genome Research ◽

10.1101/gr.6307307 ◽

2007 ◽

Vol 17 (8) ◽

pp. 1228-1235 ◽

Cited By ~ 8

Author(s):

J. A. Greenhall ◽

M. A. Zapala ◽

M. Caceres ◽

O. Libiger ◽

C. Barlow ◽

...

Keyword(s):

Genetic Variation ◽

Expression Data ◽

Microarray Expression Data ◽

Microarray Expression

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Faculty Opinions recommendation of A global meta-analysis of microarray expression data to predict unknown gene functions and estimate the literature-data divide.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.1162449.623967 ◽

2009 ◽

Author(s):

Nicola Mulder

Keyword(s):

Meta Analysis ◽

Expression Data ◽

Microarray Expression Data ◽

Gene Functions ◽

Unknown Gene ◽

Microarray Expression

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An empirical study of supervised learning for biological sequence profiling and microarray expression data analysis

2008 IEEE International Conference on Information Reuse and Integration ◽

10.1109/iri.2008.4583007 ◽

2008 ◽

Author(s):

Abu H. M. Kamal ◽

Xingquan Zhu ◽

Abhijit S. Pandya ◽

Sam Hsu ◽

Yong Shi

Keyword(s):

Data Analysis ◽

Empirical Study ◽

Supervised Learning ◽

Expression Data ◽

Biological Sequence ◽

Microarray Expression Data ◽

Microarray Expression

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LipGene: Lipschitz continuity guided adaptive learning rates for fast convergence on Microarray Expression Data Sets

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2021.3110516 ◽

2021 ◽

pp. 1-1

Author(s):

Tejas Prashanth ◽

Snehanshu Saha ◽

Sumedh Basarkod ◽

Suraj Aralihalli ◽

Soma S Dhavala ◽

...

Keyword(s):

Adaptive Learning ◽

Lipschitz Continuity ◽

Fast Convergence ◽

Data Sets ◽

Expression Data ◽

Microarray Expression Data ◽

Learning Rates ◽

Microarray Expression

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Finite mixture model analysis of microarray expression data on samples of uncertain biological type with application to reproductive efficiency

Veterinary Immunology and Immunopathology ◽

10.1016/j.vetimm.2005.02.008 ◽

2005 ◽

Vol 105 (3-4) ◽

pp. 187-196 ◽

Cited By ~ 3

Author(s):

Nan Bing ◽

Ina Hoeschele ◽

Keying Ye ◽

Kenneth J. Eilertsen

Keyword(s):

Mixture Model ◽

Finite Mixture Model ◽

Model Analysis ◽

Finite Mixture ◽

Reproductive Efficiency ◽

Expression Data ◽

Microarray Expression Data ◽

Microarray Expression

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Analysis of microarray expression data

Genome Biology ◽

10.1186/gb-2000-1-1-reports226 ◽

2000 ◽

Vol 1 (1) ◽

Cited By ~ 1

Author(s):

Paul Kellam

Keyword(s):

Expression Data ◽

Microarray Expression Data ◽

Microarray Expression

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Digging for Significant Genes in Microarray Expression Data Based on Systematic Sampling and Hierarchal Clustering Algorithm

GeNeDis 2020 - Advances in Experimental Medicine and Biology ◽

10.1007/978-3-030-78775-2_1 ◽

2021 ◽

pp. 1-6

Author(s):

Nwayyin N. Mohammed

Keyword(s):

Clustering Algorithm ◽

Systematic Sampling ◽

Expression Data ◽

Microarray Expression Data ◽

Microarray Expression

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Pathway recognition and augmentation by computational analysis of microarray expression data

Bioinformatics ◽

10.1093/bioinformatics/bti764 ◽

2005 ◽

Vol 22 (2) ◽

pp. 233-241 ◽

Cited By ~ 14

Author(s):

B. A. Novak ◽

A. N. Jain

Keyword(s):

Computational Analysis ◽

Expression Data ◽

Microarray Expression Data ◽

Microarray Expression

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Single feature polymorphism detection using recombinant inbred line microarray expression data

Bioinformatics ◽

10.1093/bioinformatics/btq316 ◽

2010 ◽

Vol 26 (16) ◽

pp. 1983-1989 ◽

Cited By ~ 1

Author(s):

Xinping Cui ◽

Na You ◽

Thomas Girke ◽

Richard Michelmore ◽

Allen Van Deynze

Keyword(s):

Inbred Line ◽

Recombinant Inbred Line ◽

Recombinant Inbred ◽

Single Feature Polymorphism ◽

Expression Data ◽

Microarray Expression Data ◽

Polymorphism Detection ◽

Single Feature ◽

Microarray Expression

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Novel clustering algorithm for microarray expression data in a truncated SVD space

Bioinformatics ◽

10.1093/bioinformatics/btg053 ◽

2003 ◽

Vol 19 (9) ◽

pp. 1110-1115 ◽

Cited By ~ 41

Author(s):

D. Horn ◽

I. Axel

Keyword(s):

Clustering Algorithm ◽

Expression Data ◽

Microarray Expression Data ◽

Truncated Svd ◽

Microarray Expression

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Interpreting microarray expression data using text annotating the genes

Information Sciences ◽

10.1016/s0020-0255(02)00216-5 ◽

2002 ◽

Vol 146 (1-4) ◽

pp. 75-88 ◽

Cited By ~ 1

Author(s):

Michael Molla ◽

Peter Andreae ◽

Jeremy Glasner ◽

Frederick Blattner ◽

Jude Shavlik

Keyword(s):

Expression Data ◽

Microarray Expression Data ◽

Microarray Expression

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