scholarly journals Unsupervised domain adaptation for the automated segmentation of neuroanatomy in MRI: a deep learning approach

2019 ◽  
Author(s):  
Philip Novosad ◽  
Vladimir Fonov ◽  
D. Louis Collins

AbstractNeuroanatomical segmentation in T1-weighted magnetic resonance imaging of the brain is a prerequisite for quantitative morphological measurements, as well as an essential element in general pre-processing pipelines. While recent fully automated segmentation methods based on convolutional neural networks have shown great potential, these methods nonetheless suffer from severe performance degradation when there are mismatches between training (source) and testing (target) domains (e.g. due to different scanner acquisition protocols or due to anatomical differences in the respective populations under study). This work introduces a new method for unsupervised domain adaptation which improves performance in challenging cross-domain applications without requiring any additional annotations on the target domain. Using a previously validated state-of-the-art segmentation method based on a context-augmented convolutional neural network, we first demonstrate that networks with better domain generalizability can be trained using extensive data augmentation with label-preserving transformations which mimic differences between domains. Second, we incorporate unlabelled target domain samples into training using a self-ensembling approach, demonstrating further performance gains, and further diminishing the performance gap in comparison to fully-supervised training on the target domain.

2021 ◽  
Vol 2021 ◽  
pp. 1-8
Author(s):  
Baoying Chen ◽  
Shunquan Tan

Recently, various Deepfake detection methods have been proposed, and most of them are based on convolutional neural networks (CNNs). These detection methods suffer from overfitting on the source dataset and do not perform well on cross-domain datasets which have different distributions from the source dataset. To address these limitations, a new method named FeatureTransfer is proposed in this paper, which is a two-stage Deepfake detection method combining with transfer learning. Firstly, The CNN model pretrained on a third-party large-scale Deepfake dataset can be used to extract the more transferable feature vectors of Deepfake videos in the source and target domains. Secondly, these feature vectors are fed into the domain-adversarial neural network based on backpropagation (BP-DANN) for unsupervised domain adaptive training, where the videos in the source domain have real or fake labels, while the videos in the target domain are unlabelled. The experimental results indicate that the proposed method FeatureTransfer can effectively solve the overfitting problem in Deepfake detection and greatly improve the performance of cross-dataset evaluation.


2020 ◽  
Vol 34 (04) ◽  
pp. 6615-6622 ◽  
Author(s):  
Guanglei Yang ◽  
Haifeng Xia ◽  
Mingli Ding ◽  
Zhengming Ding

Unsupervised domain adaptation facilitates the unlabeled target domain relying on well-established source domain information. The conventional methods forcefully reducing the domain discrepancy in the latent space will result in the destruction of intrinsic data structure. To balance the mitigation of domain gap and the preservation of the inherent structure, we propose a Bi-Directional Generation domain adaptation model with consistent classifiers interpolating two intermediate domains to bridge source and target domains. Specifically, two cross-domain generators are employed to synthesize one domain conditioned on the other. The performance of our proposed method can be further enhanced by the consistent classifiers and the cross-domain alignment constraints. We also design two classifiers which are jointly optimized to maximize the consistency on target sample prediction. Extensive experiments verify that our proposed model outperforms the state-of-the-art on standard cross domain visual benchmarks.


2021 ◽  
Vol 10 (8) ◽  
pp. 523
Author(s):  
Nicholus Mboga ◽  
Stefano D’Aronco ◽  
Tais Grippa ◽  
Charlotte Pelletier ◽  
Stefanos Georganos ◽  
...  

Multitemporal environmental and urban studies are essential to guide policy making to ultimately improve human wellbeing in the Global South. Land-cover products derived from historical aerial orthomosaics acquired decades ago can provide important evidence to inform long-term studies. To reduce the manual labelling effort by human experts and to scale to large, meaningful regions, we investigate in this study how domain adaptation techniques and deep learning can help to efficiently map land cover in Central Africa. We propose and evaluate a methodology that is based on unsupervised adaptation to reduce the cost of generating reference data for several cities and across different dates. We present the first application of domain adaptation based on fully convolutional networks for semantic segmentation of a dataset of historical panchromatic orthomosaics for land-cover generation for two focus cities Goma-Gisenyi and Bukavu. Our experimental evaluation shows that the domain adaptation methods can reach an overall accuracy between 60% and 70% for different regions. If we add a small amount of labelled data from the target domain, too, further performance gains can be achieved.


2021 ◽  
pp. 1-7
Author(s):  
Rong Chen ◽  
Chongguang Ren

Domain adaptation aims to solve the problems of lacking labels. Most existing works of domain adaptation mainly focus on aligning the feature distributions between the source and target domain. However, in the field of Natural Language Processing, some of the words in different domains convey different sentiment. Thus not all features of the source domain should be transferred, and it would cause negative transfer when aligning the untransferable features. To address this issue, we propose a Correlation Alignment with Attention mechanism for unsupervised Domain Adaptation (CAADA) model. In the model, an attention mechanism is introduced into the transfer process for domain adaptation, which can capture the positively transferable features in source and target domain. Moreover, the CORrelation ALignment (CORAL) loss is utilized to minimize the domain discrepancy by aligning the second-order statistics of the positively transferable features extracted by the attention mechanism. Extensive experiments on the Amazon review dataset demonstrate the effectiveness of CAADA method.


Author(s):  
Sheng-Wei Huang ◽  
Che-Tsung Lin ◽  
Shu-Ping Chen ◽  
Yen-Yi Wu ◽  
Po-Hao Hsu ◽  
...  

2021 ◽  
Author(s):  
Jiahao Fan ◽  
Hangyu Zhu ◽  
Xinyu Jiang ◽  
Long Meng ◽  
Cong Fu ◽  
...  

Deep sleep staging networks have reached top performance on large-scale datasets. However, these models perform poorer when training and testing on small sleep cohorts due to data inefficiency. Transferring well-trained models from large-scale datasets (source domain) to small sleep cohorts (target domain) is a promising solution but still remains challenging due to the domain-shift issue. In this work, an unsupervised domain adaptation approach, domain statistics alignment (DSA), is developed to bridge the gap between the data distribution of source and target domains. DSA adapts the source models on the target domain by modulating the domain-specific statistics of deep features stored in the Batch Normalization (BN) layers. Furthermore, we have extended DSA by introducing cross-domain statistics in each BN layer to perform DSA adaptively (AdaDSA). The proposed methods merely need the well-trained source model without access to the source data, which may be proprietary and inaccessible. DSA and AdaDSA are universally applicable to various deep sleep staging networks that have BN layers. We have validated the proposed methods by extensive experiments on two state-of-the-art deep sleep staging networks, DeepSleepNet+ and U-time. The performance was evaluated by conducting various transfer tasks on six sleep databases, including two large-scale databases, MASS and SHHS, as the source domain, four small sleep databases as the target domain. Thereinto, clinical sleep records acquired in Huashan Hospital, Shanghai, were used. The results show that both DSA and AdaDSA could significantly improve the performance of source models on target domains, providing novel insights into the domain generalization problem in sleep staging tasks.<br>


Symmetry ◽  
2020 ◽  
Vol 12 (12) ◽  
pp. 1994
Author(s):  
Ping Li ◽  
Zhiwei Ni ◽  
Xuhui Zhu ◽  
Juan Song ◽  
Wenying Wu

Domain adaptation manages to learn a robust classifier for target domain, using the source domain, but they often follow different distributions. To bridge distribution shift between the two domains, most of previous works aim to align their feature distributions through feature transformation, of which optimal transport for domain adaptation has attract researchers’ interest, as it can exploit the local information of the two domains in the process of mapping the source instances to the target ones by minimizing Wasserstein distance between their feature distributions. However, it may weaken the feature discriminability of source domain, thus degrade domain adaptation performance. To address this problem, this paper proposes a two-stage feature-based adaptation approach, referred to as optimal transport with dimensionality reduction (OTDR). In the first stage, we apply the dimensionality reduction with intradomain variant maximization but source intraclass compactness minimization, to separate data samples as much as possible and enhance the feature discriminability of the source domain. In the second stage, we leverage optimal transport-based technique to preserve the local information of the two domains. Notably, the desirable properties in the first stage can mitigate the degradation of feature discriminability of the source domain in the second stage. Extensive experiments on several cross-domain image datasets validate that OTDR is superior to its competitors in classification accuracy.


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