scholarly journals Behavioural relevance of spontaneous, transient brain network interactions in fMRI

2019 ◽  
Author(s):  
D. Vidaurre ◽  
A. Llera ◽  
S.M. Smith ◽  
M.W. Woolrich
Keyword(s):  
Functional Connectivity ◽  
Network Architecture ◽  
Brain Networks ◽  
Structural Data ◽  
Brain Regions ◽  
Brain Network ◽  
Time Varying ◽  
Human Connectome Project ◽  
Brain Data ◽  
Structural Brain

AbstractHow spontaneously fluctuating functional magnetic resonance imaging (fMRI) signals in different brain regions relate to behaviour has been an open question for decades. Correlations in these signals, known as functional connectivity, can be averaged over several minutes of data to provide a stable representation of the functional network architecture for an individual. However, associations between these stable features and behavioural traits have been shown to be dominated by individual differences in anatomy. Here, using kernel learning tools, we propose methods to assess and compare the relation between time-varying functional connectivity, time-averaged functional connectivity, structural brain data, and non-imaging subject behavioural traits. We applied these methods on Human Connectome Project resting-state fMRI data to show that time-varying fMRI functional connectivity, detected at time-scales of a few seconds, has associations with some behavioural traits that are not dominated by anatomy. Despite time-averaged functional connectivity accounting for the largest proportion of variability in the fMRI signal between individuals, we found that some aspects of intelligence could only be explained by time-varying functional connectivity. The finding that time-varying fMRI functional connectivity has a unique relationship to population behavioural variability suggests that it might reflect transient neuronal communication fluctuating around a stable neural architecture.Significance statementComplex cognition is dynamic and emerges from the interaction between multiple areas across the whole brain, i.e. from brain networks. Hence, the utility of functional MRI to investigate brain activity depends on how well it can capture time-varying network interactions. Here, we develop methods to predict behavioural traits of individuals from either time-varying functional connectivity, time-averaged functional connectivity, or structural brain data. We use these to show that the time-varying nature of functional brain networks in fMRI can be reliably measured and can explain aspects of behaviour not captured by structural data or time-averaged functional connectivity. These results provide important insights to the question of how the brain represents information and how these representations can be measured with fMRI.

scholarly journals Improved state change estimation in dynamic functional connectivity using hidden semi-Markov models

2019 ◽  
Author(s):  
Heather Shappell ◽  
Brian S. Caffo ◽  
James J. Pekar ◽  
Martin A. Lindquist
Keyword(s):  
Functional Connectivity ◽  
Markov Models ◽  
Brain Networks ◽  
Resting State Fmri ◽  
Brain Regions ◽  
Fmri Data ◽  
Time Varying ◽  
Human Connectome Project ◽  
Functional Brain Networks ◽  
Network States

AbstractThe study of functional brain networks has grown rapidly over the past decade. While most functional connectivity (FC) analyses estimate one static network structure for the entire length of the functional magnetic resonance imaging (fMRI) time series, recently there has been increased interest in studying time-varying changes in FC. Hidden Markov models (HMMs) have proven to be a useful modeling approach for discovering repeating graphs of interacting brain regions (brain states). However, a limitation lies in HMMs assuming that the sojourn time, the number of consecutive time points in a state, is geometrically distributed. This may encourage inaccurate estimation of the time spent in a state before switching to another state. We propose a hidden semi-Markov model (HSMM) approach for inferring time-varying brain networks from fMRI data, which explicitly models the sojourn distribution. Specifically, we propose using HSMMs to find each subject’s most probable series of network states and the graphs associated with each state, while properly estimating and modeling the sojourn distribution for each state. We perform a simulation study, as well as an analysis on both task-based fMRI data from an anxiety-inducing experiment and resting-state fMRI data from the Human Connectome Project. Our results demonstrate the importance of model choice when estimating sojourn times and reveal their potential for understanding healthy and diseased brain mechanisms.

scholarly journals Brain network dynamics correlate with personality traits

2019 ◽  
Author(s):  
Aya Kabbara ◽  
Veronique Paban ◽  
Arnaud Weill ◽  
Julien Modolo ◽  
Mahmoud Hassan
Keyword(s):  
Functional Connectivity ◽  
Personality Traits ◽  
Resting State ◽  
Brain Networks ◽  
Neural Substrates ◽  
Brain Network ◽  
Functional Brain ◽  
Human Connectome Project ◽  
Functional Brain Networks ◽  
The Brain

AbstractIntroductionIdentifying the neural substrates underlying the personality traits is a topic of great interest. On the other hand, it is now established that the brain is a dynamic networked system which can be studied using functional connectivity techniques. However, much of the current understanding of personality-related differences in functional connectivity has been obtained through the stationary analysis, which does not capture the complex dynamical properties of brain networks.ObjectiveIn this study, we aimed to evaluate the feasibility of using dynamic network measures to predict personality traits.MethodUsing the EEG/MEG source connectivity method combined with a sliding window approach, dynamic functional brain networks were reconstructed from two datasets: 1) Resting state EEG data acquired from 56 subjects. 2) Resting state MEG data provided from the Human Connectome Project. Then, several dynamic functional connectivity metrics were evaluated.ResultsSimilar observations were obtained by the two modalities (EEG and MEG) according to the neuroticism, which showed a negative correlation with the dynamic variability of resting state brain networks. In particular, a significant relationship between this personality trait and the dynamic variability of the temporal lobe regions was observed. Results also revealed that extraversion and openness are positively correlated with the dynamics of the brain networks.ConclusionThese findings highlight the importance of tracking the dynamics of functional brain networks to improve our understanding about the neural substrates of personality.

scholarly journals Large-scale network integration in the human brain tracks temporal fluctuations in memory encoding performance

eLife ◽  
2018 ◽  
Vol 7 ◽  
Author(s):  
Ruedeerat Keerativittayayut ◽  
Ryuta Aoki ◽  
Mitra Taghizadeh Sarabi ◽  
Koji Jimura ◽  
Kiyoshi Nakahara
Keyword(s):  
Functional Connectivity ◽  
Human Brain ◽  
Large Scale ◽  
Brain Regions ◽  
Brain Network ◽  
Time Varying ◽  
Memory Encoding ◽  
Graph Metrics ◽  
Connectivity Patterns ◽  
Network States

Although activation/deactivation of specific brain regions has been shown to be predictive of successful memory encoding, the relationship between time-varying large-scale brain networks and fluctuations of memory encoding performance remains unclear. Here, we investigated time-varying functional connectivity patterns across the human brain in periods of 30–40 s, which have recently been implicated in various cognitive functions. During functional magnetic resonance imaging, participants performed a memory encoding task, and their performance was assessed with a subsequent surprise memory test. A graph analysis of functional connectivity patterns revealed that increased integration of the subcortical, default-mode, salience, and visual subnetworks with other subnetworks is a hallmark of successful memory encoding. Moreover, multivariate analysis using the graph metrics of integration reliably classified the brain network states into the period of high (vs. low) memory encoding performance. Our findings suggest that a diverse set of brain systems dynamically interact to support successful memory encoding.

scholarly journals Latent functional connectivity underlying multiple brain states

2021 ◽  
Author(s):  
Ethan M McCormick ◽  
Katelyn L Arnemann ◽  
Takuya Ito ◽  
Stephen Jose Hanson ◽  
Michael W Cole
Keyword(s):  
Functional Connectivity ◽  
Resting State ◽  
Network Architecture ◽  
Brain Activity ◽  
Brain Network ◽  
Mathematical Framework ◽  
Human Connectome Project ◽  
Brain States ◽  
Task Conditions ◽  
Psychometric G

Functional connectivity (FC) studies have predominantly focused on resting state, where ongoing dynamics are thought to primarily reflect the brain's intrinsic network architecture, which is thought to be broadly relevant to brain function because it persists across brain states. However, it is unknown whether resting state is the optimal state for measuring intrinsic FC. We propose that latent FC, reflecting patterns of connectivity shared across many brain states, may better capture intrinsic FC relative to measures derived from resting state alone. We estimated latent FC in relation to 7 highly distinct task states (24 task conditions) and resting state using fMRI data from 352 participants from the Human Connectome Project. Latent FC was estimated independently for each connection by applying leave-one-task-out factor analysis on the state FC estimates. Compared to resting-state connectivity, we found that latent connectivity improves generalization to held-out brain states, better explaining patterns of both connectivity and task-evoked brain activity. We also found that latent connectivity improved prediction of behavior, measured by the general intelligence factor psychometric g. Our results suggest that patterns of FC shared across many brain states, rather than just resting state, better reflects general, state-independent connectivity. This affirms the notion of "intrinsic" brain network architecture as a set of connectivity properties persistent across brain states, providing an updated conceptual and mathematical framework of intrinsic connectivity as a latent factor.

scholarly journals Learning Clique Subgraphs in Structural Brain Network Classification with Application to Crystallized Cognition

2020 ◽  
Author(s):  
Lu Wang ◽  
Feng Vankee Lin ◽  
Martin Cole ◽  
Zhengwu Zhang
Keyword(s):  
Oral Reading ◽  
Brain Networks ◽  
Brain Regions ◽  
Brain Network ◽  
Learning Differences ◽  
Structural Brain Network ◽  
Levels Of Functioning ◽  
The Brain ◽  
Variable Selection Problem ◽  
Structural Brain

AbstractStructural brain networks constructed from diffusion MRI are important biomarkers for understanding human brain structure and its relation to cognitive functioning. There is increasing interest in learning differences in structural brain networks between groups of subjects in neuroimaging studies, leading to a variable selection problem in network classification. Traditional methods often use independent edgewise tests or unstructured generalized linear model (GLM) with regularization on vectorized networks to select edges distinguishing the groups, which ignore the network structure and make the results hard to interpret. In this paper, we develop a symmetric bilinear logistic regression (SBLR) with elastic-net penalty to identify a set of small clique subgraphs in network classification. Clique subgraphs, consisting of all the interconnections among a subset of brain regions, have appealing neurological interpretations as they may correspond to some anatomical circuits in the brain related to the outcome. We apply this method to study differences in the structural connectome between adolescents with high and low crystallized cognitive ability, using the crystallized cognition composite score, picture vocabulary and oral reading recognition tests from NIH Toolbox. A few clique subgraphs containing several small sets of brain regions are identified between different levels of functioning, indicating their importance in crystallized cognition.

scholarly journals Structural brain correlates of cognitive function in schizophrenia: a meta-analysis

2021 ◽  
Author(s):  
Marianne Khalil ◽  
Philippine Hollander ◽  
Delphine Raucher-Chene ◽  
Martin Lepage ◽  
Katie M. Lavigne
Keyword(s):  
Executive Function ◽  
Social Cognition ◽  
Brain Structure ◽  
Network Architecture ◽  
Visual Memory ◽  
Meta Analysis ◽  
Brain Networks ◽  
Brain Regions ◽  
Cognitive Domains ◽  
Structural Brain

Schizophrenia is characterized by cognitive impairments and widespread structural brain alterations (e.g., decreased volume, thickness, surface area). Brain structure-cognition associations have been extensively studied in schizophrenia, typically involving individual cognitive domains or brain regions of interest. Findings in overlapping and diffuse brain regions may point to structural alterations in large-scale brain networks. We performed a systematic review and meta-analysis examining whether brain structure-cognition associations can be explained in terms of biologically meaningful brain networks. Of 7,621 screened articles, 88 were included in a series of meta-analyses assessing publication bias, heterogeneity, and study quality. Significant associations were found between overall brain structure and eight cognitive domains (speed of processing, attention/vigilance, working/verbal/visual memory, executive function, social cognition, and verbal fluency). Brain structure within functionally defined networks (default, dorsal/ventral attention, frontoparietal, limbic, somatosensory, visual) and external structures (amygdala, hippocampus, and cerebellum) typically showed associations with conceptually related cognitive domains, with higher-level domains (e.g., executive function, social cognition) associated with more networks. These findings suggest brain structure-cognition associations in schizophrenia may follow network architecture.

scholarly journals Multimodal Brain Network Jointly Construction and Fusion for Diagnosis of Epilepsy

2021 ◽  
Vol 15 ◽  
Author(s):  
Qi Zhu ◽  
Jing Yang ◽  
Bingliang Xu ◽  
Zhenghua Hou ◽  
Liang Sun ◽  
...  
Keyword(s):  
Network Analysis ◽  
Structural Information ◽  
Brain Networks ◽  
Structural Data ◽  
Disease Diagnosis ◽  
Brain Regions ◽  
Brain Network ◽  
Low Rank ◽  
Unified Framework ◽  
Network Construction

Brain network analysis has been proved to be one of the most effective methods in brain disease diagnosis. In order to construct discriminative brain networks and improve the performance of disease diagnosis, many machine learning–based methods have been proposed. Recent studies show that combining functional and structural brain networks is more effective than using only single modality data. However, in the most of existing multi-modal brain network analysis methods, it is a common strategy that constructs functional and structural network separately, which is difficult to embed complementary information of different modalities of brain network. To address this issue, we propose a unified brain network construction algorithm, which jointly learns both functional and structural data and effectively face the connectivity and node features for improving classification. First, we conduct space alignment and brain network construction under a unified framework, and then build the correlation model among all brain regions with functional data by low-rank representation so that the global brain region correlation can be captured. Simultaneously, the local manifold with structural data is embedded into this model to preserve the local structural information. Second, the PageRank algorithm is adaptively used to evaluate the significance of different brain regions, in which the interaction of multiple brain regions is considered. Finally, a multi-kernel strategy is utilized to solve the data heterogeneity problem and merge the connectivity as well as node information for classification. We apply the proposed method to the diagnosis of epilepsy, and the experimental results show that our method can achieve a promising performance.

scholarly journals Spontaneous cognitive processes and the behavioral validation of time-varying brain connectivity

2018 ◽  
Vol 2 (4) ◽  
pp. 397-417 ◽  
Author(s):  
Aaron Kucyi ◽  
Arielle Tambini ◽  
Sepideh Sadaghiani ◽  
Shella Keilholz ◽  
Jessica R. Cohen
Keyword(s):  
Functional Connectivity ◽  
Cognitive Processes ◽  
Functional Neuroimaging ◽  
Brain Connectivity ◽  
Network Dynamics ◽  
Brain Regions ◽  
Brain Network ◽  
Time Varying ◽  
Correlated Activity ◽  
External Stimuli

In cognitive neuroscience, focus is commonly placed on associating brain function with changes in objectively measured external stimuli or with actively generated cognitive processes. In everyday life, however, many forms of cognitive processes are initiated spontaneously, without an individual’s active effort and without explicit manipulation of behavioral state. Recently, there has been increased emphasis, especially in functional neuroimaging research, on spontaneous correlated activity among spatially segregated brain regions (intrinsic functional connectivity) and, more specifically, on intraindividual fluctuations of such correlated activity on various time scales (time-varying functional connectivity). In this Perspective, we propose that certain subtypes of spontaneous cognitive processes are detectable in time-varying functional connectivity measurements. We define these subtypes of spontaneous cognitive processes and review evidence of their representations in time-varying functional connectivity from studies of attentional fluctuations, memory reactivation, and effects of baseline states on subsequent perception. Moreover, we describe how these studies are critical to validating the use of neuroimaging tools (e.g., fMRI) for assessing ongoing brain network dynamics. We conclude that continued investigation of the behavioral relevance of time-varying functional connectivity will be beneficial both in the development of comprehensive neural models of cognition, and in informing on best practices for studying brain network dynamics.

scholarly journals Cerebral Energy Metabolism and the Brain’s Functional Network Architecture: An Integrative Review

2013 ◽  
Vol 33 (9) ◽  
pp. 1347-1354 ◽  
Author(s):  
Louis-David Lord ◽  
Paul Expert ◽  
Jeremy F Huckins ◽  
Federico E Turkheimer
Keyword(s):  
Functional Connectivity ◽  
High Frequency ◽  
Network Architecture ◽  
Large Scale ◽  
Brain Networks ◽  
Glucose Consumption ◽  
Brain Regions ◽  
Functional Brain ◽  
Neurobiological Substrates ◽  
Functional Brain Networks

Recent functional magnetic resonance imaging (fMRI) studies have emphasized the contributions of synchronized activity in distributed brain networks to cognitive processes in both health and disease. The brain’s ‘functional connectivity’ is typically estimated from correlations in the activity time series of anatomically remote areas, and postulated to reflect information flow between neuronal populations. Although the topological properties of functional brain networks have been studied extensively, considerably less is known regarding the neurophysiological and biochemical factors underlying the temporal coordination of large neuronal ensembles. In this review, we highlight the critical contributions of high-frequency electrical oscillations in the γ-band (30 to 100 Hz) to the emergence of functional brain networks. After describing the neurobiological substrates of γ-band dynamics, we specifically discuss the elevated energy requirements of high-frequency neural oscillations, which represent a mechanistic link between the functional connectivity of brain regions and their respective metabolic demands. Experimental evidence is presented for the high oxygen and glucose consumption, and strong mitochondrial performance required to support rhythmic cortical activity in the γ-band. Finally, the implications of mitochondrial impairments and deficits in glucose metabolism for cognition and behavior are discussed in the context of neuropsychiatric and neurodegenerative syndromes characterized by large-scale changes in the organization of functional brain networks.

scholarly journals Heritability and interindividual variability of regional structure-function coupling

2021 ◽  
Vol 12 (1) ◽  
Author(s):  
Zijin Gu ◽  
Keith Wakefield Jamison ◽  
Mert Rory Sabuncu ◽  
Amy Kuceyeski
Keyword(s):  
Functional Connectivity ◽  
Structure Function ◽  
Regional Differences ◽  
Regional Scale ◽  
Brain Regions ◽  
Diffusion Weighted Mri ◽  
Regional Structure ◽  
Human Connectome Project ◽  
Structural Connections ◽  
The Relationship

AbstractWhite matter structural connections are likely to support flow of functional activation or functional connectivity. While the relationship between structural and functional connectivity profiles, here called SC-FC coupling, has been studied on a whole-brain, global level, few studies have investigated this relationship at a regional scale. Here we quantify regional SC-FC coupling in healthy young adults using diffusion-weighted MRI and resting-state functional MRI data from the Human Connectome Project and study how SC-FC coupling may be heritable and varies between individuals. We show that regional SC-FC coupling strength varies widely across brain regions, but was strongest in highly structurally connected visual and subcortical areas. We also show interindividual regional differences based on age, sex and composite cognitive scores, and that SC-FC coupling was highly heritable within certain networks. These results suggest regional structure-function coupling is an idiosyncratic feature of brain organisation that may be influenced by genetic factors.

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