scholarly journals Single Nanoparticle Tracking Reveals Efficient Long-Distance Undercurrent Transport above Swarming Bacteria

2019 ◽  
Author(s):  
Jingjing Feng ◽  
Zexin Zhang ◽  
Xiaodong Wen ◽  
Jianfeng Xue ◽  
Yan He

AbstractFlagellated bacteria move collectively in a swirling pattern on agar surfaces immersed in a thin layer of viscous “swarm fluid”, but the role of this fluid in mediating the cooperation of the bacterial population is not well understood. Herein, we use gold nanorods (AuNRs) as single particle tracers to explore the spatiotemporal structure of the swarm fluid. We observed that individual AuNRs are transported in a plane of ~2 μm above the motile cells. They can travel for long distances (>700 μm) in a 2D plane at high speed (often >50 μm2/s) without interferences from bacterial movements. The particles are apparently lifted up and transported by collective mixing of the small vortices around bacteria during localized clustering and de-clustering of the motile cells, exhibiting superdiffusive and non-Gaussian characteristics with alternating large-step jumps and confined lingering. Their motions are consistent with the Lévy walk (LW) model, revealing efficient transport flows above swarms. These flows provide obstacle-free highways for long-range material transportations, shed light on how swarming bacteria perform population-level communications, and reveal the essential role of the fluid phase on the emergence of large-scale synergy. This approach is promising for probing complex fluid dynamics and transports in other collective systems.

2015 ◽  
Vol 2015 ◽  
pp. 1-11 ◽  
Author(s):  
Guoqing Chen ◽  
Yan Zhang ◽  
Runqiu Huang ◽  
Fan Guo ◽  
Guofeng Zhang

Acoustic emission (AE) technique is widely used in various fields as a reliable nondestructive examination technology. Two experimental tests were carried out in a rock mechanics laboratory, which include (1) small scale direct shear tests of rock bridge with different lengths and (2) large scale landslide model with locked section. The relationship of AE event count and record time was analyzed during the tests. The AE source location technology and comparative analysis with its actual failure model were done. It can be found that whether it is small scale test or large scale landslide model test, AE technique accurately located the AE source point, which reflected the failure generation and expansion of internal cracks in rock samples. Large scale landslide model with locked section test showed that rock bridge in rocky slope has typical brittle failure behavior. The two tests based on AE technique well revealed the rock failure mechanism in rocky slope and clarified the cause of high speed and long distance sliding of rocky slope.


2012 ◽  
Vol 3 (1) ◽  
pp. 417-431 ◽  
Author(s):  
P. K. Haff

Abstract. Displacement of mass of limited deformability ("solids") on the Earth's surface is opposed by friction and (the analog of) form resistance – impediments relaxed by rotational motion, self-powering of mass units, and transport infrastructure. These features of solids transport first evolved in the biosphere prior to the emergence of technology, allowing slope-independent, diffusion-like motion of discrete objects as massive as several tons, as illustrated by animal foraging and movement along game trails. However, high-energy-consumption technology powered by fossil fuels required a mechanism that could support advective transport of solids, i.e., long-distance, high-volume, high-speed, unidirectional, slope independent transport across the land surface of materials like coal, containerized fluids, and minerals. Pre-technology nature was able to sustain large-scale, long-distance solids advection only in the limited form of piggybacking on geophysical flows of water (river sediment) and air (dust). The appearance of a generalized mechanism for advection of solids independent of fluid flows and gravity appeared only upon the emergence of human purpose. Purpose enables solids advection by, in effect, enabling a simulated continuous potential gradient, otherwise lacking, between discrete and widely separated fossil-fuel energy sources and sinks. Invoking purpose as a mechanism in solids advection is an example of the need to import anthropic principles and concepts into the language and methodology of modern Earth system dynamics. As part of the emergence of a generalized solids advection mechanism, several additional transport requirements necessary to the function of modern large-scale technological systems were also satisfied. These include spatially accurate delivery of advected payload, targetability to essentially arbitrarily located destinations (such as cities), and independence of structure of advected payload from transport mechanism. The latter property enables the transport of an onboard power supply and delivery of persistent-memory, high-information-content payload, such as technological artifacts ("parts").


2007 ◽  
Vol 08 (04) ◽  
pp. 321-336 ◽  
Author(s):  
HIROAKI ECHIGO ◽  
YOSHITAKA SHIBATA ◽  
KAZUO TAKAHATA

In this paper, a robust and large scale resident-oriented safety information system on the occurrence of the various disasters constructed over a nationwide high-speed network is introduced. The evacuated residents can register their safety information to the local safety information servers in the evacuation area whether they can safely evaluated or not using mobile PCs or terminals at the evacuation place or mobile terminals on the way of evacuation. All of the local information servers are connected each other by wireless network and the safety information can be sent an upper-layer database in the district area and finally integrated into a district safety information in that region. In our system some of the damaged local servers due to the disaster can be detected and recovered by the upper-layer database server. On the other hand, the upper-layer database servers are backed up by mirror servers located at mutually different locations with long distance to isolate the influence of the same disaster when the some of them were destroyed or disordered. Thus, by introducing two levels of redundancy and backup functions, more large scale and robust safety information database system can be realized. A prototype system is constructed over Japan Gigabit Network (JGN2) to evaluate the performance of the suggested system. Through the performance evaluation for the prototype system, we could verify the usability and scalability of our suggested system.


2011 ◽  
Vol 28 (1) ◽  
pp. 119-122 ◽  
Author(s):  
Georgina O'Farrill ◽  
Sophie Calmé ◽  
Raja Sengupta ◽  
Andrew Gonzalez

Even though the full process of seed dispersal is the combination of movement mode and distance, deposition, successful germination and survival (Nathan 2006, Westcott et al. 2005), relatively few studies have documented the role of mammals as facilitators of germination and survival (Paine & Harms 2009). In particular, the effectiveness of large terrestrial mammals (>50 kg) as effective dispersers of large seeds is poorly known, but has been linked to the treatment of the seeds in their digestive system, the deposition of viable seeds in nutrient-rich environments (faeces) and favourable sites. Other aspects related to long-distance movements, defecation patterns and home-range size are frequently cited as factors that favour the deposition of seeds far from parent trees, which is expected to reduce predation and intraspecific competition, and enhance fitness (Schupp et al. 2002). We addressed these issues through a large-scale field experiment.


2012 ◽  
Vol 3 (2) ◽  
pp. 149-156 ◽  
Author(s):  
P. K. Haff

Abstract. Displacement of mass of limited deformability ("solids") on the Earth's surface is opposed by friction and (the analog of) form resistance – impediments relaxed by rotational motion, self-powering of mass units, and transport infrastructure. These features of solids transport first evolved in the biosphere prior to the emergence of technology, allowing slope-independent, diffusion-like motion of discrete objects as massive as several tons, as illustrated by animal foraging and movement along game trails. However, high-energy-consumption technology powered by fossil fuels required a mechanism that could support fast advective transport of solids, i.e., long-distance, high-volume, high-speed, unidirectional, slope-independent transport across the land surface of materials like coal, containerized fluids, minerals, and economic goods. Pre-technology nature was able to sustain regional- and global-scale advection only in the limited form of piggybacking on geophysical flows of water (river sediment) and air (dust). The appearance of a mechanism for sustained advection of solids independent of fluid flows and gravity appeared only upon the emergence of human purpose. Purpose enables solids advection by, in effect, simulating a continuous potential gradient, otherwise lacking, between discrete and widely separated fossil-fuel energy sources and sinks. Invoking purpose as a mechanism in solids advection is an example of the need to import anthropic principles and concepts into the language and methodology of modern Earth system dynamics. As part of the emergence of a generalized solids advection mechanism, several additional transport requirements necessary to the function of modern large-scale technological systems were also satisfied. These include spatially accurate delivery of advected payload, targetability to essentially arbitrarily located destinations (such as cities), and independence of structure of advected payload from transport mechanism. The latter property enables the transport of an onboard power supply and delivery of persistent-memory, high-information-content payload, such as technological artifacts ("parts").


Author(s):  
F. S. Alvi ◽  
H. Lou ◽  
C. Shih

Supersonic impinging jets produce a highly unsteady flowfield leading to very high dynamic pressure loads on nearby surfaces. In earlier studies, we conclusively demonstrated that arrays of supersonic microjet, 400 μm in diameter, effectively disrupted the feedback loop inherent in high-speed impinging jet flows. This feedback disruption results in significant reductions in the adverse effects associated with such flows. In this paper, by primarily using detailed velocity field measurements, we examine the role of streamwise vorticity in order to better understand the mechanisms behind this control scheme. The velocity field measurements clearly reveal the presence of well-organized, streamwise vortices with the activation of microjets. This increase in streamwise vorticity is concomitant with a reduction in the azimuthal vorticity of the primary jet. We propose that the streamwise vorticity is mainly a result of the redirection of the azimuthal vorticity, which leads to a weakening of the large-scale structures in the primary jet. The appearance of strong vortices in the shear layer near the nozzle exit due to microjets further weakens the spatial coherence of the coupling between the acoustic waves and shear layer instability, while thickening the jet shear layer. All these effects are thought to be collectively responsible for the efficient disruption of the feedback loop using microjets.


2011 ◽  
Vol 9 (67) ◽  
pp. 376-388 ◽  
Author(s):  
L. Mari ◽  
E. Bertuzzo ◽  
L. Righetto ◽  
R. Casagrandi ◽  
M. Gatto ◽  
...  

We investigate the role of human mobility as a driver for long-range spreading of cholera infections, which primarily propagate through hydrologically controlled ecological corridors. Our aim is to build a spatially explicit model of a disease epidemic, which is relevant to both social and scientific issues. We present a two-layer network model that accounts for the interplay between epidemiological dynamics, hydrological transport and long-distance dissemination of the pathogen Vibrio cholerae owing to host movement, described here by means of a gravity-model approach. We test our model against epidemiological data recorded during the extensive cholera outbreak occurred in the KwaZulu-Natal province of South Africa during 2000–2001. We show that long-range human movement is fundamental in quantifying otherwise unexplained inter-catchment transport of V. cholerae , thus playing a key role in the formation of regional patterns of cholera epidemics. We also show quantitatively how heterogeneously distributed drinking water supplies and sanitation conditions may affect large-scale cholera transmission, and analyse the effects of different sanitation policies.


2017 ◽  
Vol 4 (3) ◽  
pp. 160914 ◽  
Author(s):  
Alberto Aleta ◽  
Andreia N. S. Hisi ◽  
Sandro Meloni ◽  
Chiara Poletto ◽  
Vittoria Colizza ◽  
...  

Rapidly mutating pathogens may be able to persist in the population and reach an endemic equilibrium by escaping hosts’ acquired immunity. For such diseases, multiple biological, environmental and population-level mechanisms determine the dynamics of the outbreak, including pathogen's epidemiological traits (e.g. transmissibility, infectious period and duration of immunity), seasonality, interaction with other circulating strains and hosts’ mixing and spatial fragmentation. Here, we study a susceptible-infected-recovered-susceptible model on a metapopulation where individuals are distributed in sub-populations connected via a network of mobility flows. Through extensive numerical simulations, we explore the phase space of pathogen's persistence and map the dynamical regimes of the pathogen following emergence. Our results show that spatial fragmentation and mobility play a key role in the persistence of the disease whose maximum is reached at intermediate mobility values. We describe the occurrence of different phenomena including local extinction and emergence of epidemic waves, and assess the conditions for large-scale spreading. Findings are highlighted in reference to previous studies and to real scenarios. Our work uncovers the crucial role of hosts’ mobility on the ecological dynamics of rapidly mutating pathogens, opening the path for further studies on disease ecology in the presence of a complex and heterogeneous environment.


2020 ◽  
Author(s):  
Rahul Potluri ◽  
Deepthi Lavu

BACKGROUND The Coronavirus disease 2019(COVID-19) outbreak has caused havoc across the world. Subsequently, research on COVID-19 has focused on number of cases and deaths and predicted projections have focused on these parameters. We propose that the number of tests performed is a very important denominator in understanding the COVID-19 data. OBJECTIVE We analysed the number of diagnostic tests performed in proportion to the number of cases and subsequently deaths across different countries and projected pandemic outcomes. METHODS We obtained real time COVID-19 data from the reference website Worldometer at 0900 BST on Saturday 4th April, 2020 and collated the information obtained on the top 50 countries with the highest number of COVID 19 cases. We analysed this data according to the number of tests performed as the main denominator. Country wise population level pandemic projections were extrapolated utilising three models - 1) inherent case per test and death per test rates at the time of obtaining the data (4/4/2020 0900 BST) for each country; 2) rates adjusted according to the countries who conducted at least 100000 tests and 3) rates adjusted according to South Korea. RESULTS We showed that testing rates impact on the number of cases and deaths and ultimately on future projections for the pandemic across different countries. CONCLUSIONS We found that countries with the highest testing rates per population have the lowest death rates and give us an early indication of an eventual COVID-19 mortality rate. It is only by continued testing on a large scale that will enable us to know if the increasing number of patients who are seriously unwell in hospitals across the world are the tip of the iceberg or not. Accordingly, obtaining this information through a rapid increase in testing globally is the only way which will enable us to exit the COVID-19 pandemic and reduce economic and social instability. CLINICALTRIAL Not applicable


2020 ◽  
Author(s):  
Rahul Potluri ◽  
Deepthi Lavu

AbstractThe Coronavirus disease 2019(COVID-19) outbreak has caused havoc across the world. Subsequently, research on COVID-19 has focused on number of cases and deaths and predicted projections have focused on these parameters. We propose that the number of tests performed is a very important denominator in understanding the COVID-19 data. We analysed the number of diagnostic tests performed in proportion to the number of cases and subsequently deaths across different countries and projected pandemic outcomes.We obtained real time COVID-19 data from the reference website Worldometer at 0900 BST on Saturday 4th April, 2020 and collated the information obtained on the top 50 countries with the highest number of COVID 19 cases. We analysed this data according to the number of tests performed as the main denominator. Country wise population level pandemic projections were extrapolated utilising three models - 1) inherent case per test and death per test rates at the time of obtaining the data (4/4/2020 0900 BST) for each country; 2) rates adjusted according to the countries who conducted at least 100000 tests and 3) rates adjusted according to South Korea.We showed that testing rates impact on the number of cases and deaths and ultimately on future projections for the pandemic across different countries. We found that countries with the highest testing rates per population have the lowest death rates and give us an early indication of an eventual COVID-19 mortality rate. It is only by continued testing on a large scale that will enable us to know if the increasing number of patients who are seriously unwell in hospitals across the world are the tip of the iceberg or not. Accordingly, obtaining this information through a rapid increase in testing globally is the only way which will enable us to exit the COVID-19 pandemic and reduce economic and social instability.


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