scholarly journals Additive Dose Response Models: Defining Synergy

2018 ◽  
Author(s):  
Simone Lederer ◽  
Tjeerd M.H. Dijkstra ◽  
Tom Heskes

AbstractIn synergy studies, one focuses on compound combinations that promise a synergistic or antagonistic effect. With the help of high-throughput techniques, a huge amount of compound combinations can be screened and filtered for suitable candidates for a more detailed analysis. Those promising candidates are chosen based on the deviance between a measured response and an expected non-interactive response. A non-interactive response is based on a principle of no interaction, such as Loewe Additivity [Loewe, 1928] or Bliss Independence [Bliss, 1939]. In Lederer et al. [2018a], an explicit formulation of the hitherto implicitly defined Loewe Additivity has been introduced, the so-called Explicit Mean Equation. In the current study we show that this Explicit Mean Equation outperforms the original implicit formulation of Loewe Additivity and Bliss Independence when measuring synergy in terms of the deviance between measured and expected response. Further, we show that a deviance based computation of synergy outper-forms a parametric approach. We show this on two datasets of compound combinations that are categorized into synergistic, non-interactive and antagonistic [Yadav et al., 2015, Cokol et al., 2011].

2018 ◽  
Vol 17 (1) ◽  
pp. 63-71 ◽  
Author(s):  
Kara Dean ◽  
Mark H. Weir ◽  
Jade Mitchell

Abstract This study develops novel dose–response models for Naegleria fowleri from selected peer-reviewed experiments on the virulence based on the intranasal exposure pathway. One data set measured the response of mice intranasally inoculated with the amebae and the other study addressed the response of mice swimming in N. fowleri infected water. The measured response for both studies was death. All experimental data were best fit by the beta-Poisson dose–response model. The three swimming experiments could be pooled, and this is the final recommended model with an LD50 of 13,257 amebae. The results of this study provide a better estimate of the probability of the risk to N. fowleri exposure than the previous models developed based on an intravenous exposure. An accurate dose–response model is the first step in quantifying the risk of free-living amebae like N. fowleri, which pose risks in recreational environments and have been detected in drinking water and premise plumbing systems. A better understanding of this risk will allow for risk management that limits the ability for pathogen growth, proliferation, and exposure.


Author(s):  
Nicola Orsini

Recognizing a dose–response pattern based on heterogeneous tables of contrasts is hard. Specification of a statistical model that can consider the possible dose–response data-generating mechanism, including its variation across studies, is crucial for statistical inference. The aim of this article is to increase the understanding of mixed-effects dose–response models suitable for tables of correlated estimates. One can use the command drmeta with additive (mean difference) and multiplicative (odds ratios, hazard ratios) measures of association. The postestimation command drmeta_graph greatly facilitates the visualization of predicted average and study-specific dose–response relationships. I illustrate applications of the drmeta command with regression splines in experimental and observational data based on nonlinear and random-effects data-generation mechanisms that can be encountered in health-related sciences.


Risk Analysis ◽  
2015 ◽  
Vol 36 (5) ◽  
pp. 926-938 ◽  
Author(s):  
Miao Guo ◽  
Abhinav Mishra ◽  
Robert L. Buchanan ◽  
Jitender P. Dubey ◽  
Dolores E. Hill ◽  
...  

2001 ◽  
Vol 7 (5) ◽  
pp. 1091-1120 ◽  
Author(s):  
Robert S. DeWoskin ◽  
Stan Barone ◽  
Harvey J. Clewell ◽  
R. Woodrow Setzer

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