scholarly journals Mutation rates in seeds and seed-banking influence substitution rates across the angiosperm phylogeny

2017 ◽  
Author(s):  
Marcel Dann ◽  
Sidonie Bellot ◽  
Sylwia Schepella ◽  
Hanno Schaefer ◽  
Aurélien Tellier
Keyword(s):  
Seed Storage ◽  
Branch Length ◽  
Population Diversity ◽  
Bet Hedging ◽  
Novel Mutations ◽  
Hedging Strategy ◽  
Substitution Rates ◽  
Unpredictable Environments ◽  
Nuclear Its ◽  
Selection Generation

Summary1)BackgroundSeed-banking (the ability to persist in the soil over many generations) is usually considered as a dormant stage where genotypes are “stored” as a bet-hedging strategy in response to unpredictable environments. However, seed dormancy may instead have consequences for the integrity of the DNA and generate novel mutations.2)MethodsWe address this paradox by building phylogenies based on the plastomes and nuclear ITS of species belonging to ten angiosperm clades. In each clade, the substitution rate (branch-length) of a seed-banking species is compared with that of a closely-related non-seed-banking species.3)ResultsSeed-banking species show as high or higher substitution rates than non-seedbanking species, and therefore mutations occur in dormant seeds at a rate at least as high as in above-ground plants. Moreover, seed born mutations have the same probability to reach fixation as those from above ground. Our results are robust to differences in selection, generation time, and polymorphism.4)ConclusionsMutations occurring in seeds, and thus seed-banking, affect the population diversity of plant species, and are observable at the macro-evolutionary scale. Our study has consequences for seed storage projects, since the stored seeds are likely to accumulate mutations at a higher rate than previously thought.

scholarly journals Phenotypic heterogeneity implements a game theoretic mixed strategy in a clonal microbial population

2014 ◽  
Author(s):  
David Healey ◽  
Jeff Gore
Keyword(s):  
Experimental Evidence ◽  
Evolutionary Game ◽  
Phenotypic Heterogeneity ◽  
Microbial Populations ◽  
Bet Hedging ◽  
Hedging Strategy ◽  
Unpredictable Environments ◽  
Game Theoretic ◽  
Pure Strategies ◽  
Genetic Mutants

Genetically identical cells in microbial populations often exhibit a remarkable degree of phenotypic heterogeneity even in homogenous environments. While such heterogeneity is often thought to be a bet-hedging strategy against unpredictable environments, evolutionary game theory also predicts phenotypic heterogeneity as a stable response to evolutionary "hawk-dove" games, in which rare strategies are favored over common ones. Here we provide experimental evidence for this game theoretic explanation in the context of the well-studied yeast GAL network. In an environment containing the two sugars glucose and galactose, the yeast GAL network displays stochastic bimodal activation. We show that genetic mutants playing the "pure" strategies of GAL-ON or GAL-OFF can each invade the opposite strategy when rare, indicating a hawk-dove game between the two. Consistent with the Nash equilibrium of an evolutionary game, the stable mix of pure strategists does not necessarily maximize the growth of the overall population. We also find that the wild type GAL network can invade populations of both pure strategists while remaining uninvasible by either. Taken together, our results provide experimental evidence that evolutionary hawk-dove games between identical cells can explain the phenotypic heterogeneity found in clonal microbial populations.

scholarly journals OFFSPRING SIZE VARIATION WITHIN BROODS AS A BET-HEDGING STRATEGY IN UNPREDICTABLE ENVIRONMENTS

Ecology ◽  
2008 ◽  
Vol 89 (9) ◽  
pp. 2506-2517 ◽  
Author(s):  
Dustin J. Marshall ◽  
Russell Bonduriansky ◽  
Luc F. Bussière
Keyword(s):  
Size Variation ◽  
Offspring Size ◽  
Bet Hedging ◽  
Hedging Strategy ◽  
Unpredictable Environments

scholarly journals Individual reversible plasticity as a genotype‐level bet‐hedging strategy

2021 ◽  
Author(s):  
Thomas R. Haaland ◽  
Jonathan Wright ◽  
Irja I. Ratikainen
Keyword(s):  
Bet Hedging ◽  
Hedging Strategy

scholarly journals Seasonality and competition select for variable germination behavior in perennials

2022 ◽  
Author(s):  
Hanna ten Brink ◽  
Thomas Ray Haaland ◽  
Oystein Hjorthol Opedal
Keyword(s):  
Simulation Models ◽  
Population Variation ◽  
Priority Effects ◽  
Bet Hedging ◽  
Environmental Predictability ◽  
Hedging Strategies ◽  
Unpredictable Environments ◽  
Evolutionary Simulation ◽  
Negative Frequency Dependent Selection ◽  
Germination Timing

The common occurrence of within-population variation in germination behavior and associated traits such as seed size has long fascinated evolutionary ecologists. In annuals, unpredictable environments are known to select for bet-hedging strategies causing variation in dormancy duration and germination strategies. Variation in germination timing and associated traits is also commonly observed in perennials, and often tracks gradients of environmental predictability. Although bet-hedging is thought to occur less frequently in long-lived organisms, these observations suggest a role of bet-hedging strategies in perennials occupying unpredictable environments. We use complementary numerical and evolutionary simulation models of within- and among-individual variation in germination behavior in seasonal environments to show how bet-hedging interacts with density dependence, life-history traits, and priority effects due to competitive differences among germination strategies. We reveal substantial scope for bet-hedging to produce variation in germination behavior in long-lived plants, when "false starts" to the growing season results in either competitive advantages or increased mortality risk for alternative germination strategies. Additionally, we find that two distinct germination strategies can evolve and coexist through negative frequency-dependent selection. These models extend insights from bet-hedging theory to perennials and explore how competitive communities may be affected by ongoing changes in climate and seasonality patterns.

scholarly journals Different resource allocation in a Bacillus subtilis population displaying bimodal motility

2021 ◽  
Author(s):  
Simon Syvertsson ◽  
Biwen Wang ◽  
Jojet Staal ◽  
Yongqiang Gao ◽  
Remco Kort ◽  
...  
Keyword(s):  
Gene Expression ◽  
Bacillus Subtilis ◽  
Exponential Growth ◽  
Environmental Changes ◽  
Feedback Regulation ◽  
Bet Hedging ◽  
Hedging Strategy ◽  
Negative Feedback Regulation ◽  
Continuous Increase ◽  
Motile Cells

To cope with sudden changes in their environment, bacteria can use a bet-hedging strategy by dividing the population into cells with different properties. This so-called bimodal or bistable cellular differentiation is generally controlled by positive feedback regulation of transcriptional activators. Due to the continuous increase in cell volume, it is difficult for these activators to reach an activation threshold concentration when cells are growing exponentially. This is one reason why bimodal differentiation is primarily observed from the onset of the stationary phase when exponential growth ceases. An exception is the bimodal induction of motility in Bacillus subtilis, which occurs early during exponential growth. Several mechanisms have been put forward to explain this, including double negative-feedback regulation and the stability of the mRNA molecules involved. In this study, we used fluorescence-assisted cell sorting to compare the transcriptome of motile and non-motile cells and noted that expression of ribosomal genes is lower in motile cells. This was confirmed using an unstable GFP reporter fused to the strong ribosomal rpsD promoter. We propose that the reduction in ribosomal gene expression in motile cells is the result of a diversion of cellular resources to the synthesis of the chemotaxis and motility systems. In agreement, single-cell microscopic analysis showed that motile cells are slightly shorter than non-motile cells, an indication of slower growth. We speculate that this growth rate reduction can contribute to the bimodal induction of motility during exponential growth. IMPORTANCE To cope with sudden environmental changes, bacteria can use a bet-hedging strategy and generate different types of cells within a population, so called bimodal differentiation. For example, a Bacillus subtilis culture can contain both motile and non-motile cells. In this study we compared the gene expression between motile and non-motile cells. It appeared that motile cells express less ribosomes. To confirm this, we constructed a ribosomal promoter fusion that enabled us to measure expression of this promoter in individual cells. This reporter fusion confirmed our initial finding. The re-allocation of cellular resources from ribosome synthesis towards synthesis of the motility apparatus results in a reduction in growth. Interestingly, this growth reduction has been shown to stimulate bimodal differentiation.

scholarly journals Costs and benefits of maternally inherited algal symbionts in coral larvae

2017 ◽  
Vol 284 (1857) ◽  
pp. 20170852 ◽  
Author(s):  
Valérie F. Chamberland ◽  
Kelly R. W. Latijnhouwers ◽  
Jef Huisman ◽  
Aaron C. Hartmann ◽  
Mark J. A. Vermeij
Keyword(s):  
Marine Invertebrates ◽  
Costs And Benefits ◽  
Bet Hedging ◽  
Hedging Strategy ◽  
Coral Larvae ◽  
Stony Coral ◽  
Algal Symbionts ◽  
Settlement Success ◽  
Spatio Temporal ◽  
Endosymbiotic Algae

Many marine invertebrates provide their offspring with symbionts. Yet the consequences of maternally inherited symbionts on larval fitness remain largely unexplored. In the stony coral Favia fragum (Esper 1797), mothers produce larvae with highly variable amounts of endosymbiotic algae, and we examined the implications of this variation in symbiont density on the performance of F. fragum larvae under different environmental scenarios. High symbiont densities prolonged the period that larvae actively swam and searched for suitable settlement habitats. Thermal stress reduced survival and settlement success in F. fragum larvae, whereby larvae with high symbiont densities suffered more from non-lethal stress and were five times more likely to die compared with larvae with low symbiont densities. These results show that maternally inherited algal symbionts can be either beneficial or harmful to coral larvae depending on the environmental conditions at hand, and suggest that F. fragum mothers use a bet-hedging strategy to minimize risks associated with spatio-temporal variability in their offspring's environment.

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