scholarly journals Demographic variability and heterogeneity among individuals within and among clonal bacteria strains

2017 ◽  
Author(s):  
Lionel Jouvet ◽  
Alexandro Rodríguez-Rojas ◽  
Ulrich K. Steiner
Keyword(s):  
Genetic Variability ◽  
Population Growth ◽  
Natural Populations ◽  
Analysis Data ◽  
Individual Variability ◽  
Dynamic Heterogeneity ◽  
Population Growth Rates ◽  
Leslie Matrices ◽  
Dynamic Stochastic ◽  
Demographic Patterns

AbstractIdentifying what drives individual heterogeneity has been of long interest to ecologists, evolutionary biologists and biodemographers, because only such identification provides deeper understanding of ecological and evolutionary population dynamics. In natural populations one is challenged to accurately decompose the drivers of heterogeneity among individuals as genetically fixed or selectively neutral. Rather than working on wild populations we present here data from a simple bacterial system in the lab, Escherichia coli. Our system, based on cutting-edge microfluidic techniques, provides high control over the genotype and the environment. It therefore allows to unambiguously decompose and quantify fixed genetic variability and dynamic stochastic variability among individuals. We show that within clonal individual variability (dynamic heterogeneity) in lifespan and lifetime reproduction is dominating at about 82-88%, over the 12-18% genetically (adaptive fixed) driven differences. The genetic differences among the clonal strains still lead to substantial variability in population growth rates (fitness), but, as well understood based on foundational work in population genetics, the within strain neutral variability slows adaptive change, by enhancing genetic drift, and lowering overall population growth. We also revealed a surprising diversity in senescence patterns among the clonal strains, which indicates diverse underlying cell-intrinsic processes that shape these demographic patterns. Such diversity is surprising since all cells belong to the same bacteria species, E. coli, and still exhibit patterns such as classical senescence, non-senescence, or negative senescence. We end by discussing whether similar levels of non-genetic variability might be detected in other systems and close by stating the open questions how such heterogeneity is maintained, how it has evolved, and whether it is adaptive.Data depositionThe processed image analysis data, R code, as well as the Leslie matrices will be archived at Dryad.org.

scholarly journals Six-Year Demographic Study of the Terrestrial Orchid, Crepidium acuminatum: Implications for Conservation

2021 ◽  
Vol 9 ◽  
Author(s):  
Binu Timsina ◽  
Pavel Kindlmann ◽  
Zuzana Münzbergová ◽  
Maan B. Rokaya
Keyword(s):  
Population Dynamics ◽  
Population Growth ◽  
Management Strategies ◽  
Natural Populations ◽  
Important Species ◽  
Growth And Survival ◽  
Population Growth Rates ◽  
Matrix Modeling ◽  
Species Population ◽  
Medicinal Orchid

Studies on population dynamics are helpful for understanding the factors determining population development and predicting the effects of disturbances, such as harvesting of plant species. In an investigation of the demography of a terrestrial medicinal orchid known as Crepidium acuminatum, the effects of harvesting on its population dynamics were recorded. Data on recruitment, growth and survival were collected in three populations of C. acuminatum over a 6-year period (2012–2017) in central Nepal. A matrix modeling method was used to determine the effect of different harvesting regimes on the population growth and survival of this species. Population growth rates (λ) of unharvested populations were relatively similar and stable in different years of the study. Harvesting significantly reduced λ. The results of this study indicate that the sustainable survival of a population that is subject to harvesting can only occur when it is either selective (only flowering individuals or only small amounts of vegetative individuals) or rotational (once every 3–5 or more years). This study demonstrates the necessity of using a sustainable method when harvesting natural populations. Our results are useful for developing efficient management strategies for this species. As each species has a different biology, similar studies are needed for other rare and/or economically important species in the Himalayan region and in other understudied parts of the world.

scholarly journals Archaeology, demography and life history theory together can help us explain past and present population patterns

2020 ◽  
Vol 376 (1816) ◽  
pp. 20190711 ◽  
Author(s):  
Stephen Shennan ◽  
Rebecca Sear
Keyword(s):  
Population Growth ◽  
Life History Theory ◽  
Environmental Variability ◽  
Demographic Data ◽  
Population Decline ◽  
Human Populations ◽  
Demographic Stochasticity ◽  
Population Growth Rates ◽  
Population Patterns ◽  
Demographic Patterns

Population matters. Demographic patterns are both a cause and a consequence of human behaviour in other important domains, such as subsistence, cooperation, politics and culture. Demographers interested in contemporary and recent historical populations have rich data at their fingertips; the importance of demography means many interested parties have gathered demographic data, much of which is now readily available for all to explore. Those interested in the demography of the distant past are not so fortunate, given the lack of written records. Nevertheless, the emergence in recent years of a new interest in the demography of ancient populations has seen the development of a range of new methods for piecing together archaeological, skeletal and DNA evidence to reconstruct past population patterns. These efforts have found evidence in support of the view that the relatively low long-term population growth rates of prehistoric human populations, albeit ultimately conditioned by carrying capacities, may have been owing to ‘boom–bust’ cycles at the regional level; rapid population growth, followed by population decline. In fact, this archaeological research may have come to the same conclusion as some contemporary demographers: that demography can be remarkably hard to predict, at least in the short term. It also fits with evidence from biology that primates, and particularly humans, may be adapted to environmental variability, leading to associated demographic stochasticity. This evidence of the fluctuating nature of human demographic patterns may be of considerable significance in understanding our species' evolution, and of understanding what our species future demographic trajectories might be. This article is part of the theme issue ‘Cross-disciplinary approaches to prehistoric demography’.

scholarly journals Daphnia invest in sexual reproduction when its relative costs are reduced

2018 ◽  
Vol 285 (1871) ◽  
pp. 20172176 ◽  
Author(s):  
Nina Gerber ◽  
Hanna Kokko ◽  
Dieter Ebert ◽  
Isobel Booksmythe
Keyword(s):  
Population Growth ◽  
Sexual Reproduction ◽  
Dynamic Models ◽  
Natural Populations ◽  
Resting Eggs ◽  
Optimal Timing ◽  
Life Stages ◽  
Asexual Population ◽  
Population Growth Rates ◽  
Cost Of Sex

The timing of sex in facultatively sexual organisms is critical to fitness, due to the differing demographic consequences of sexual versus asexual reproduction. In addition to the costs of sex itself, an association of sex with the production of dormant life stages also influences the optimal use of sex, especially in environments where resting eggs are essential to survive unfavourable conditions. Here we document population dynamics and the occurrence of sexual reproduction in natural populations of Daphnia magna across their growing season. The frequency of sexually reproducing females and males increased with population density and with decreasing asexual clutch sizes. The frequency of sexually reproducing females additionally increased as population growth rates decreased. Consistent with population dynamic models showing that the opportunity cost of sexual reproduction (foregoing contribution to current population growth) diminishes as populations approach carrying capacity, we found that investment in sexual reproduction was highest when asexual population growth was low or negative. Our results support the idea that the timing of sex is linked with periods when the relative cost of sex is reduced due to low potential asexual growth at high population densities. Thus, a combination of ecological and demographic factors affect the optimal timing of sexual reproduction, allowing D. magna to balance the necessity of sex against its costs.

scholarly journals Estimates of regional annual abundance and population growth rates of white sharks off central California

2021 ◽  
Vol 257 ◽  
pp. 109104
Author(s):  
Paul E. Kanive ◽  
Jay J. Rotella ◽  
Taylor K. Chapple ◽  
Scot D. Anderson ◽  
Timothy D. White ◽  
...  
Keyword(s):  
Population Growth ◽  
Growth Rates ◽  
Central California ◽  
Population Growth Rates

scholarly journals Differentiation and genetic variability in natural populations of Anopheles (N.) triannulatus (Neiva& Pinto, 1922) of Brazilian Amazonia

2004 ◽  
Vol 64 (2) ◽  
pp. 327-336 ◽  
Author(s):  
J. M. M. Santos ◽  
J. F. Maia ◽  
W. P. Tadei
Keyword(s):  
Genetic Variability ◽  
Natural Populations ◽  
Isozyme Analysis ◽  
Brazilian Amazonia ◽  
F Statistics

Populations of Anopheles triannulatus from Macapá (AP), Aripuanã (MT), Ji-Paraná (RO), and Manaus-Janauari Lake (AM) were studied using 16 enzymatic loci. The results of the isozyme analysis showed that the population of Macapá presented higher polymorphism (56.3%). The lowest variability was observed in the population of Manaus (p = 25.0; Ho = 0.077 ± 0.046). The results of Wright's F statistics showed unbalance due to excess of homozygotes (Fis > Fst), denoting a certain intrapopulational differentiation. Although the populations are genetically very close (D = 0.003 - 0.052), the dendrogram separates the populations in two groups: Macapá separated from that of Manaus, Ji-Paraná, and Aripuanã. This result may suggest a reduction in the genic flow, which possibly had some influence in the substructuration of the populations.

Demography of Xenosaurus platyceps (Squamata: Xenosauridae): a comparison between tropical and temperate populations

2008 ◽  
Vol 29 (2) ◽  
pp. 245-256 ◽  
Author(s):  
Carissa Jones ◽  
Isaac Rojas-González ◽  
Julio Lemos-Espinal ◽  
Jaime Zúñiga-Vega
Keyword(s):  
Life History ◽  
Population Growth ◽  
Adult Mortality ◽  
Life History Strategies ◽  
Relative Importance ◽  
Theoretical Frameworks ◽  
Population Growth Rates ◽  
Relative Contribution ◽  
Two Populations ◽  
Average Fitness

Abstract There appears to be variation in life-history strategies even between populations of the same species. For ectothermic organisms such as lizards, it has been predicted that demographic and life-history traits should differ consistently between temperate and tropical populations. This study compares the demographic strategies of a temperate and a tropical population of the lizard Xenosaurus platyceps. Population growth rates in both types of environments indicated populations in numerical equilibrium. Of the two populations, we found that the temperate population experiences lower adult mortality. The relative importance (estimated as the relative contribution to population growth rate) of permanence and of the adult/reproductive size classes is higher in the temperate population. In contrast, the relative importance for average fitness of fecundity and growth is higher in the tropical population. These results are consistent with the theoretical frameworks about life-historical differences among tropical and temperate lizard populations.

scholarly journals Genetic variability of brycon orbignyanus (valenciennes, 1850) (characiformes: characidae) in cultivated and natural populations of the upper paraná river, and implications for the conservation of the species

2011 ◽  
Vol 54 (4) ◽  
pp. 839-848 ◽  
Author(s):  
Renata de Souza Panarari-Antunes ◽  
Alberto José Prioli ◽  
Sônia Maria Alves Pinto Prioli ◽  
Alexsandro Sobreira Galdino ◽  
Horácio Ferreira Julio Junior ◽  
...  
Keyword(s):  
Genetic Variability ◽  
Natural Populations ◽  
Paraná River ◽  
Parana River ◽  
Upper Paraná River

Genetic variability in the natural populations of Lasioderma serricorne (F.) (Coleoptera: Anobiidae), detected by RAPD markers and by esterase isozymes

2015 ◽  
Vol 106 (1) ◽  
pp. 47-53 ◽  
Author(s):  
T. Coelho-Bortolo ◽  
C.A. Mangolin ◽  
A.S. Lapenta
Keyword(s):  
Genetic Variability ◽  
Random Amplified Polymorphic Dna ◽  
Natural Populations ◽  
Electrophoretic Analysis ◽  
Effective Control ◽  
Lasioderma Serricorne ◽  
Control Programs ◽  
Dried Fruit ◽  
High Level ◽  
High Degree

AbstractLasioderma serricorne (F.) is a small cosmopolitan beetle regarded as a destructive pest of several stored products such as grains, flour, spices, dried fruit and tobacco. Chemical insecticides are one of the measures used against the pest. However, intensive insecticide use has resulted in the appearance of resistant insect populations. Therefore, for the elaboration of more effective control programs, it is necessary to know the biological aspects of L. serricorne. Among these aspects, the genetic variability knowledge is very important and may help in the development of new control methods. The objective of this study was to evaluate the genetic variability of 11 natural populations of L. serricorne collected respectively in three and four towns in the states of Paraná and São Paulo, Brazil, using 20 primers random amplified polymorphic DNA (RAPD) and polymorphisms of esterases. These primers produced 352 polymorphic bands. Electrophoretic analysis of esterases allowed the identification of four polymorphic loci (Est-2, Est-4, Est-5 and Est-6) and 18 alleles. Results show that populations are genetically differentiated and there is a high level of genetic variability within populations. The high degree of genetic differentiation is not directly correlated to geographical distance. Thus, our data indicate that movement of infested commodities may contribute to the dissemination of L. serricorne, facilitating gene flow.

Sign in / Sign up

Export Citation Format

Share Document