scholarly journals Small lakes in big landscape: External drivers of littoral ecosystem in high elevation lakes

2015 ◽  
Author(s):  
Dragos G Zaharescu ◽  
Carmen I Burghelea ◽  
Peter S Hooda ◽  
Richard N Lester ◽  
Antonio Palanca-Soler
Keyword(s):  
Large Scale ◽  
Environmental Changes ◽  
Local Environment ◽  
High Elevation ◽  
Alpine Lakes ◽  
Major Influence ◽  
Catchment Scale ◽  
Water Conductivity ◽  
Geographical Scale ◽  
Water Ph

In low nutrient alpine lakes, the littoral zone is the most productive part of the ecosystem, and it is a biodiversity hotspot. It is not entirely clear how the scale and physical heterogeneity of surrounding catchment, its ecological composition, and larger landscape gradients work together to sustain littoral communities. A total of 114 alpine lakes in the central Pyrenees were surveyed to evaluate the functional connectivity between catchment physical and ecological elements and littoral zoobenthos, and ascertain their effect on community formation. At each lake, the zoobenthic composition was assessed together with geolocation (altitude, latitude and longitude), catchment hydrodynamics, geomorphology, topography, riparian vegetation composition, the presence of trout and frogs, water pH and conductivity. Uni- and multidimensional fuzzy set ordination models integrating benthic biota and environmental variables revealed that at geographical scale longitude surpassed altitude in its effect on the littoral ecosystem, reflecting a sharp transition between Atlantic and Mediterranean bioregions. Topography (through its control of catchment type, summer snow coverage, and connectivity with other lakes) was the largest catchment-scale driver, followed by hydrodynamics (waterbody size, type and inflow/outflow volumes). Locally, riparian plant composition significantly related to littoral community structure, richness and morphotype diversity. These variables, directly and indirectly, create habitats for aquatic and terrestrial stages of invertebrates, and control nutrient and water cycles. Three ecologically diverse associations characterised distinct lake sets. Vertebrate predation, water conductivity and pH (broad measures of total dissolved ions/nutrients and their bioavailability) had no major influence on littoral taxa. The work provides exhaustive information from relatively pristine sites, which unveil a strong connection between littoral ecosystem and catchment heterogeneity at scales beyond the local environment. This underpins their role as sensors of local and large-scale environmental changes, and can be used to evaluate further impacts.

scholarly journals New kid on the block: Research of alpine-lake macroinvertebrates in the Tatra Mountains enhanced by DNA barcoding and metabarcoding

2021 ◽  
Vol 4 ◽  
Author(s):  
Ondrej Vargovčík ◽  
Zuzana Čiamporová-Zaťovičová ◽  
Fedor Čiampor Jr
Keyword(s):  
Large Scale ◽  
Environmental Changes ◽  
Human Impacts ◽  
Sampling Error ◽  
Alpine Lakes ◽  
Alpine Lake ◽  
Tatra Mountains ◽  
Aquatic Communities ◽  
Wide Range ◽  
The Tatra Mountains

State of ecosystems and biodiversity protection are becoming the key interests for modern society due to climate change and negative human impacts (Leese 2018). Environmental changes in freshwaters are indicated also by benthic communities, especially in sensitive ecosystems like alpine lakes (Fjellheim 2009). Moreover, remoteness and isolation of alpine lakes make them a source of biodiversity, which is worth conserving (Hamerlík 2014). A promising tool for efficient large-scale monitoring of aquatic communities is DNA metabarcoding (Leese 2018). In this study, we applied metabarcoding to analyse macrozoobenthos of 12 lakes in the Tatra Mountains, using benthic bulk samples and eDNA filtered from water (Fig. 1). In compliance with recent publications, eDNA amplified with BF3/BR2 primers resulted in high percentage of non-invertebrate reads (Leese 2021). Based on in silico tests with the obtained sequences, we confirm that the recently developed EPTDr2n primer enables minimizing non-target amplification even with eDNA filtered from alpine-lake water (Elbrecht and Leese 2017). This ability is facilitated by 3’ end of the primer and we observed the two important mismatches in non-target sequences from our study (Leese 2021). Thus, our future analyses of eDNA (and bulk-sample fixative) will benefit from the new primer. Concerning bulk samples, a wide range of invertebrate taxa was assigned to the OTUs and they showed good congruence with previous studies using morphological determination (e.g. Krno 2006). Certain differences with (and among) the previous records per lake were observed, which could suggest ecological changes, but at the moment the influence of sampling error cannot be excluded. In eDNA, several taxa were congruent with the previous records, but their amount and read abundance was considerably lower due to non-target amplification. Apart from that, filling gaps in barcoding databases remains one of our priorities, as identification to species or genus level was not yet possible for some invertebrate OTUs. In addition, we subjected the NGS data to denoising and abundance-filtering in order to explore haplotype-level diversity (Andújar 2021). Although more comprehensive conclusions will be possible only after obtaining data from more lakes and years, already the two metabarcoding experiments presented here enabled us to efficiently detect within-species genetic diversity and identify a large variety of taxa, including groups that would otherwise be omitted or very challenging to identify. This underlines the potential of DNA methods to provide valuable ecological and biodiversity data across the tree of life for modern biomonitoring. This study was realized with support from VEGA 2/0030/17 and VEGA 2/0084/21.

scholarly journals Specific Functional Features of the Cell Integrity MAP Kinase Pathway in the Dimorphic Fission Yeast Schizosaccharomyces japonicus

2021 ◽  
Vol 7 (6) ◽  
pp. 482
Author(s):  
Elisa Gómez-Gil ◽  
Alejandro Franco ◽  
Beatriz Vázquez-Marín ◽  
Francisco Prieto-Ruiz ◽  
Armando Pérez-Díaz ◽  
...  
Keyword(s):  
Fission Yeast ◽  
Environmental Changes ◽  
Yeast Species ◽  
Mapk Signaling ◽  
Fine Tuning ◽  
Mitogen Activated Protein Kinase ◽  
Major Influence ◽  
Cell Integrity ◽  
Mitogen Activated Protein ◽  
Functional Features

Mitogen activated protein kinase (MAPK) signaling pathways execute essential functions in eukaryotic organisms by transducing extracellular stimuli into adaptive cellular responses. In the fission yeast model Schizosaccharomyces pombe the cell integrity pathway (CIP) and its core effector, MAPK Pmk1, play a key role during regulation of cell integrity, cytokinesis, and ionic homeostasis. Schizosaccharomyces japonicus, another fission yeast species, shows remarkable differences with respect to S. pombe, including a robust yeast to hyphae dimorphism in response to environmental changes. We show that the CIP MAPK module architecture and its upstream regulators, PKC orthologs Pck1 and Pck2, are conserved in both fission yeast species. However, some of S. pombe’s CIP-related functions, such as cytokinetic control and response to glucose availability, are regulated differently in S. japonicus. Moreover, Pck1 and Pck2 antagonistically regulate S. japonicus hyphal differentiation through fine-tuning of Pmk1 activity. Chimeric MAPK-swapping experiments revealed that S. japonicus Pmk1 is fully functional in S. pombe, whereas S. pombe Pmk1 shows a limited ability to execute CIP functions and promote S. japonicus mycelial development. Our findings also suggest that a modified N-lobe domain secondary structure within S. japonicus Pmk1 has a major influence on the CIP signaling features of this evolutionarily diverged fission yeast.

scholarly journals Impact of the municipal merger on watershed management: a study of Lake Kasumigaura, Japan

2021 ◽  
Author(s):  
Takeshi Mizunoya ◽  
Noriko Nozaki ◽  
Rajeev Kumar Singh
Keyword(s):  
Watershed Management ◽  
Large Scale ◽  
Environmental Changes ◽  
Water Environment ◽  
Reduction Rate ◽  
Oxygen Demand ◽  
Policy Implications ◽  
Pollution Reduction ◽  
Lake Kasumigaura ◽  
The Impact

AbstractIn the early 2000s, Japan instituted the Great Heisei Consolidation, a national strategy to promote large-scale municipal mergers. This study analyzes the impact that this strategy could have on watershed management. We select the Lake Kasumigaura Basin, the second largest lake in Japan, for the case study and construct a dynamic expanded input–output model to simulate the ecological system around the Lake, the socio-environmental changes over the period, and their mutual dependency for the period 2012–2020. In the model, we regulate and control the following water pollutants: total nitrogen, total phosphorus, and chemical oxygen demand. The results show that a trade-off between economic activity and the environment can be avoided within a specific range of pollution reduction, given that the prefectural government implements optimal water environment policies, assuming that other factors constraining economic growth exist. Additionally, municipal mergers are found to significantly reduce the budget required to improve the water environment, but merger budget efficiency varies nonlinearly with the reduction rate. Furthermore, despite the increase in financial efficiency from the merger, the efficiency of installing domestic wastewater treatment systems decreases drastically beyond a certain pollution reduction level and eventually reaches a limit. Further reductions require direct regulatory instruments in addition to economic policies, along with limiting the output of each industry. Most studies on municipal mergers apply a political, administrative, or financial perspective; few evaluate the quantitative impact of municipal mergers on the environment and environmental policy implications. This study addresses these gaps.

scholarly journals Combined Block Adjustment for Optical Satellite Stereo Imagery Assisted by Spaceborne SAR and Laser Altimetry Data

2021 ◽  
Vol 13 (16) ◽  
pp. 3062
Author(s):  
Guo Zhang ◽  
Boyang Jiang ◽  
Taoyang Wang ◽  
Yuanxin Ye ◽  
Xin Li
Keyword(s):  
Large Scale ◽  
Satellite Image ◽  
Field Measurements ◽  
High Elevation ◽  
Global Scale ◽  
Stereo Image ◽  
Image Process ◽  
Control Points ◽  
Altimetry Data ◽  
Laser Altimetry

To ensure the accuracy of large-scale optical stereo image bundle block adjustment, it is necessary to provide well-distributed ground control points (GCPs) with high accuracy. However, it is difficult to acquire control points through field measurements outside the country. Considering the high planimetric accuracy of spaceborne synthetic aperture radar (SAR) images and the high elevation accuracy of satellite-based laser altimetry data, this paper proposes an adjustment method that combines both as control sources, which can be independent from GCPs. Firstly, the SAR digital orthophoto map (DOM)-based planar control points (PCPs) acquisition is realized by multimodal matching, then the laser altimetry data are filtered to obtain laser altimetry points (LAPs), and finally the optical stereo images’ combined adjustment is conducted. The experimental results of Ziyuan-3 (ZY-3) images prove that this method can achieve an accuracy of 7 m in plane and 3 m in elevation after adjustment without relying on GCPs, which lays the technical foundation for a global-scale satellite image process.

Tree growth across the Nepal Himalaya during the last four centuries

2017 ◽  
Vol 41 (4) ◽  
pp. 478-495 ◽  
Author(s):  
UK Thapa ◽  
S St. George ◽  
DK Kharal ◽  
NP Gaire
Keyword(s):  
Tree Ring ◽  
Tree Growth ◽  
Environmental Changes ◽  
Ring Width ◽  
High Elevation ◽  
Forest Growth ◽  
Tree Ring Width ◽  
Early 19Th Century ◽  
Tree Ring Data ◽  
Instrumental Records

The climate of Nepal has changed rapidly over the recent decades, but most instrumental records of weather and hydrology only extend back to the 1980s. Tree rings can provide a longer perspective on recent environmental changes, and since the early 2000s, a new round of field initiatives by international researchers and Nepali scientists have more than doubled the size of the country’s tree-ring network. In this paper, we present a comprehensive analysis of the current tree-ring width network for Nepal, and use this network to estimate changes in forest growth nation-wide during the last four centuries. Ring-width chronologies in Nepal have been developed from 11 tree species, and half of the records span at least 290 years. The Nepal tree-ring width network provides a robust estimate of annual forest growth over roughly the last four centuries, but prior to this point, our mean ring-width composite fluctuates wildly due to low sample replication. Over the last four centuries, two major events are prominent in the all-Nepal composite: (i) a prolonged and widespread growth suppression during the early 1800s; and (ii) heightened growth during the most recent decade. The early 19th century decline in tree growth coincides with two major Indonesian eruptions, and suggests that short-term disturbances related to climate extremes can exert a lasting influence on the vigor of Nepal’s forests. Growth increases since AD 2000 are mainly apparent in high-elevation fir, which may be a consequence of the observed trend towards warmer temperatures, particularly during winter. This synthesis effort should be useful to establish baselines for tree-ring data in Nepal and provide a broader context to evaluate the sensitivity or behavior of this proxy in the central Himalayas.

scholarly journals Is environmental legislation conserving tropical stream faunas? A large-scale assessment of local, riparian and catchment-scale influences on Amazonian fish

2017 ◽  
Vol 55 (3) ◽  
pp. 1312-1326 ◽  
Author(s):  
Cecília G. Leal ◽  
Jos Barlow ◽  
Toby A. Gardner ◽  
Robert M. Hughes ◽  
Rafael P. Leitão ◽  
...  
Keyword(s):  
Large Scale ◽  
Environmental Legislation ◽  
Tropical Stream ◽  
Catchment Scale ◽  
Large Scale Assessment ◽  
Amazonian Fish ◽  
Scale Assessment

scholarly journals Variability in larval gut pH regulation defines sensitivity to ocean acidification in six species of the Ambulacraria superphylum

2017 ◽  
Vol 284 (1864) ◽  
pp. 20171066 ◽  
Author(s):  
Marian Hu ◽  
Yung-Che Tseng ◽  
Yi-Hsien Su ◽  
Etienne Lein ◽  
Hae-Gyeong Lee ◽  
...  
Keyword(s):  
Ocean Acidification ◽  
Large Scale ◽  
Environmental Changes ◽  
Ph Regulation ◽  
Gastric Ph ◽  
Differential Sensitivity ◽  
Larval Stages ◽  
Regulatory Systems ◽  
Alkaline Conditions ◽  
Gut Ph

The unusual rate and extent of environmental changes due to human activities may exceed the capacity of marine organisms to deal with this phenomenon. The identification of physiological systems that set the tolerance limits and their potential for phenotypic buffering in the most vulnerable ontogenetic stages become increasingly important to make large-scale projections. Here, we demonstrate that the differential sensitivity of non-calcifying Ambulacraria (echinoderms and hemichordates) larvae towards simulated ocean acidification is dictated by the physiology of their digestive systems. Gastric pH regulation upon experimental ocean acidification was compared in six species of the superphylum Ambulacraria. We observed a strong correlation between sensitivity to ocean acidification and the ability to regulate gut pH. Surprisingly, species with tightly regulated gastric pH were more sensitive to ocean acidification. This study provides evidence that strict maintenance of highly alkaline conditions in the larval gut of Ambulacraria early life stages may dictate their sensitivity to decreases in seawater pH. These findings highlight the importance of identifying and understanding pH regulatory systems in marine larval stages that may contribute to substantial energetic challenges under near-future ocean acidification scenarios.

scholarly journals Changes to the chemical state of the northern hemisphere atmosphere during the second half of the twentieth century

2016 ◽  
Author(s):  
Mike J. Newland ◽  
Patricia Martinerie ◽  
Emmanuel Witrant ◽  
Detlev Helmig ◽  
David R. Worton ◽  
...  
Keyword(s):  
Northern Hemisphere ◽  
Large Scale ◽  
Atmospheric Composition ◽  
The Arctic ◽  
Major Influence ◽  
Secondary Products ◽  
Alkyl Nitrates ◽  
Mixing Ratios ◽  
Wide Range

Abstract. The NOX (NO and NO2) and HOX (OH and HO2) budgets of the atmosphere exert a major influence on atmospheric composition, controlling removal of primary pollutants and formation of a wide range of secondary products, including ozone, that can influence human health and climate. However, there remain large uncertainties in the changes to these budgets over recent decades. Due to their short atmospheric lifetimes, NOX and HOX are highly variable in space and time, and so the measurements of these species are of very limited value for examining long term, large scale changes to their budgets. Here, we take an alternative approach by examining long-term atmospheric trends of alkyl nitrates, the formation of which is dependent on the atmospheric NO / HO2 ratio. We derive long term trends in the alkyl nitrates from measurements in firn air from the NEEM site, Greenland. Their mixing ratios increased by a factor of 4–5 between the 1970s and 1990s. This was followed by a steep decline to the sampling date of 2008. Moreover, we examine how the trends in the alkyl nitrates compare to similarly derived trends in their parent alkanes (i.e. the alkanes which, when oxidised in the presence of NOX, lead to the formation of the alkyl nitrates). The ratios of the alkyl nitrates to their parent alkanes increase from around 1970 to the late 1990's consistent with large changes to the [NO] / [HO2] ratio in the northern hemisphere atmosphere during this period. These could represent historic changes to NOX sources and sinks. Alternatively, they could represent changes to concentrations of the hydroxyl radical, OH, or to the transport time of the air masses from source regions to the Arctic.

scholarly journals Assessing the Vulnerability of Marine Fisheries in China: Towards an Inter-Provincial Perspective

2018 ◽  
Vol 10 (11) ◽  
pp. 4302 ◽  
Author(s):  
Qi Chen ◽  
Weiteng Shen ◽  
Bing Yu
Keyword(s):  
Climate Change ◽  
Adaptive Capacity ◽  
Fisheries Management ◽  
Vocational Training ◽  
Large Scale ◽  
Environmental Changes ◽  
Marine Pollution ◽  
Marine Fisheries ◽  
Intergovernmental Panel ◽  
Adaptation Measures

China’s marine fisheries are undergoing large-scale environmental changes associated with climate change, marine pollution, and overfishing. The assessment of marine fisheries vulnerability has become extremely necessary for fisheries management and sustainable development. However, studies on China’s marine fisheries vulnerability remains sparse. This study aimed to provide an analysis of the inter-provincial level vulnerability of China’s marine fisheries under multiple disturbances. The vulnerability measure was composed of exposure, sensitivity, and adaptive capacity indicators specific to marine fisheries based on the Intergovernmental Panel on Climate Change (IPCC) definitions. Results showed that Liaoning, Hebei, Fujian, and Hainan provinces appeared to be the most vulnerable; Shanghai appeared to be less vulnerable among China’s 11 coastal provinces; and the key sources of vulnerability differed considerably among coastal regions. The high vulnerability regions could be divided into two different patterns according to the combination of exposure, sensitivity, and adaptive capacity, but they all had one thing in common: relatively low adaptive capacity. While some existing coercive measures to reduce dependence on fisheries were found to be helpful in China, the reality showed that appropriate adaptation measures such as improving fishermen’s education level and increasing vocational training may be helpful in enhancing the existing policy effectiveness.

scholarly journals The pitfalls of biodiversity proxies: Differences in richness patterns of birds, trees and understudied diversity across Amazonia

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Camila D. Ritter ◽  
Søren Faurby ◽  
Dominic J. Bennett ◽  
Luciano N. Naka ◽  
Hans ter Steege ◽  
...  
Keyword(s):  
Species Richness ◽  
Large Scale ◽  
Spatial Scales ◽  
Local Environment ◽  
Life Forms ◽  
Taxonomic Group ◽  
Diversity Gradients ◽  
Richness Patterns ◽  
Taxonomic Groups ◽  
Micro Organisms

AbstractMost knowledge on biodiversity derives from the study of charismatic macro-organisms, such as birds and trees. However, the diversity of micro-organisms constitutes the majority of all life forms on Earth. Here, we ask if the patterns of richness inferred for macro-organisms are similar for micro-organisms. For this, we barcoded samples of soil, litter and insects from four localities on a west-to-east transect across Amazonia. We quantified richness as Operational Taxonomic Units (OTUs) in those samples using three molecular markers. We then compared OTU richness with species richness of two relatively well-studied organism groups in Amazonia: trees and birds. We find that OTU richness shows a declining west-to-east diversity gradient that is in agreement with the species richness patterns documented here and previously for birds and trees. These results suggest that most taxonomic groups respond to the same overall diversity gradients at large spatial scales. However, our results show a different pattern of richness in relation to habitat types, suggesting that the idiosyncrasies of each taxonomic group and peculiarities of the local environment frequently override large-scale diversity gradients. Our findings caution against using the diversity distribution of one taxonomic group as an indication of patterns of richness across all groups.

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