scholarly journals A primer on rhythm quantification for fish sounds: a Mediterranean case study

2021 ◽  
Vol 8 (9) ◽  
pp. 210494
Author(s):  
Lara S. Burchardt ◽  
Marta Picciulin ◽  
Eric Parmentier ◽  
Marta Bolgan

We have used a lately established workflow to quantify rhythms of three fish sound types recorded in different areas of the Mediterranean Sea. So far, the temporal structure of fish sound sequences has only been described qualitatively. Here, we propose a standardized approach to quantify them, opening the path for assessment and comparison of an often underestimated but potentially critical aspect of fish sounds. Our approach is based on the analysis of inter-onset-intervals (IOIs), the intervals between the start of one sound element and the next. We calculate exact beats of a sequence using Fourier analysis and IOI analysis. Furthermore, we report on important parameters describing the variability in timing within a given sound sequence. Datasets were chosen to depict different possible rhythmic properties: Sciaena umbra sounds have a simple isochronous—metronome-like—rhythm. The /Kwa/ sound type emitted by Scorpaena spp. has a more complex rhythm, still presenting an underlying isochronous pattern. Calls of Ophidion rochei males present no rhythm, but a random temporal succession of sounds. This approach holds great potential for shedding light on important aspects of fish bioacoustics. Applications span from the characterization of specific behaviours to the potential discrimination of yet not distinguishable species.

2018 ◽  
Author(s):  
Marie Barbieux ◽  
Julia Uitz ◽  
Bernard Gentili ◽  
Orens Pasqueron de Fommervault ◽  
Alexandre Mignot ◽  
...  

Abstract. As commonly observed in oligotrophic stratified waters, a Subsurface (or Deep) Chlorophyll Maximum (SCM) frequently characterizes the vertical distribution of phytoplankton chlorophyll in the Mediterranean Sea. Occurring far from the surface layer seen by ocean color satellites, SCMs are difficult to observe with adequate spatio-temporal resolution and their biogeochemical impact remains unknown. BioGeochemical-Argo (BGC-Argo) profiling floats represent appropriate tools for studying the dynamics of SCMs. Based on data collected from 36 BGC-Argo floats deployed in the Mediterranean Sea, our study aims to address two main questions: (1) What are the different types of SCMs in Mediterranean Sea? (2) Which environmental factors control their occurrence and dynamics? First, we analyzed the seasonal and regional variations of the chlorophyll concentration (Chla), particulate backscattering coefficient (bbp), a proxy of the Particulate Organic Carbon (POC), and environmental parameters (PAR and nitrates) within the SCM layer over the Mediterranean basin. The vertical profiles of Chla and bbp were then statistically classified, and the seasonal occurrence of each of the different types of SCMs quantified. Finally, a case study was performed on two contrasted regions and the environmental conditions at depth were further investigated to understand which parameter controls the SCMs. In the Eastern Basin, SCMs result, at a first order, from photoacclimation process. Conversely, SCMs in the Western Basin reflect a biomass increase at depth benefiting from both light and nitrate resources. Our results also suggest that a variety of intermediate types of SCMs are encountered between these two end-member situations.


2016 ◽  
Vol 22 (6) ◽  
pp. 694-707 ◽  
Author(s):  
Stelios Katsanevakis ◽  
Fernando Tempera ◽  
Heliana Teixeira

2011 ◽  
Vol 8 (5) ◽  
pp. 8961-8998 ◽  
Author(s):  
Y. Cuypers ◽  
P. Bouruet-Aubertot ◽  
C. Marec ◽  
J.-L. Fuda

Abstract. One main purpose of BOUM experiment was to give evidence of the possible impact of submesoscale dynamics on biogeochemical cycles. To this aim physical as well as biogeochemical data were collected along a zonal transect through the western and eastern basins. Along this transect 3 day fixed point stations were performed within anticyclonic eddies during which microstructure measurements were collected over the first 100 m. We focus here on the characterization of turbulent mixing induced by internal wave breaking. The analysis of microstructure measurements revealed a high level of turbulence in the seasonal pycnocline and a moderate level below with energy dissipation mean values of the order of 10−6 W kg−1 and 10−8 W kg−1, respectively. Fine-scale parameterizations developed to mimic energy dissipation produced by internal wavebreaking were then tested against these direct measurements. Once validated a parameterization has been applied to infer energy dissipation and mixing over the whole data set, thus providing an overview over a latitudinal section of the Mediterranean sea. The results evidence a significant increase of dissipation at the top and base of eddies associated with strong near inertial waves. Vertical turbulent diffusivity is increased both in these regions and in the weakly stratified eddy core.


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