scholarly journals Explaining large-scale patterns of vertebrate diversity

2015 ◽  
Vol 11 (7) ◽  
pp. 20150506 ◽  
Author(s):  
John J. Wiens
Keyword(s):  
Species Richness ◽  
Large Scale ◽  
Comparative Methods ◽  
Phylogenetic Comparative Methods ◽  
Metabolic Rates ◽  
Diversification Rates ◽  
Richness Patterns ◽  
Current Species

The major clades of vertebrates differ dramatically in their current species richness, from 2 to more than 32 000 species each, but the causes of this variation remain poorly understood. For example, a previous study noted that vertebrate clades differ in their diversification rates, but did not explain why they differ. Using a time-calibrated phylogeny and phylogenetic comparative methods, I show that most variation in diversification rates among 12 major vertebrate clades has a simple ecological explanation: predominantly terrestrial clades (i.e. birds, mammals, and lizards and snakes) have higher net diversification rates than predominantly aquatic clades (i.e. amphibians, crocodilians, turtles and all fish clades). These differences in diversification rates are then strongly related to patterns of species richness. Habitat may be more important than other potential explanations for richness patterns in vertebrates (such as climate and metabolic rates) and may also help explain patterns of species richness in many other groups of organisms.

scholarly journals The pitfalls of biodiversity proxies: Differences in richness patterns of birds, trees and understudied diversity across Amazonia

2019 ◽  
Vol 9 (1) ◽  
Author(s):  
Camila D. Ritter ◽  
Søren Faurby ◽  
Dominic J. Bennett ◽  
Luciano N. Naka ◽  
Hans ter Steege ◽  
...  
Keyword(s):  
Species Richness ◽  
Large Scale ◽  
Spatial Scales ◽  
Local Environment ◽  
Life Forms ◽  
Taxonomic Group ◽  
Diversity Gradients ◽  
Richness Patterns ◽  
Taxonomic Groups ◽  
Micro Organisms

AbstractMost knowledge on biodiversity derives from the study of charismatic macro-organisms, such as birds and trees. However, the diversity of micro-organisms constitutes the majority of all life forms on Earth. Here, we ask if the patterns of richness inferred for macro-organisms are similar for micro-organisms. For this, we barcoded samples of soil, litter and insects from four localities on a west-to-east transect across Amazonia. We quantified richness as Operational Taxonomic Units (OTUs) in those samples using three molecular markers. We then compared OTU richness with species richness of two relatively well-studied organism groups in Amazonia: trees and birds. We find that OTU richness shows a declining west-to-east diversity gradient that is in agreement with the species richness patterns documented here and previously for birds and trees. These results suggest that most taxonomic groups respond to the same overall diversity gradients at large spatial scales. However, our results show a different pattern of richness in relation to habitat types, suggesting that the idiosyncrasies of each taxonomic group and peculiarities of the local environment frequently override large-scale diversity gradients. Our findings caution against using the diversity distribution of one taxonomic group as an indication of patterns of richness across all groups.

scholarly journals Testing Seven Hypotheses to Determine What Explains the Current Planthopper (Fulgoridae) Geographical and Species Richness Patterns in China

Insects ◽  
2020 ◽  
Vol 11 (12) ◽  
pp. 892
Author(s):  
Zheng-Xue Zhao ◽  
Lin Yang ◽  
Jian-Kun Long ◽  
Zhi-Min Chang ◽  
Zheng-Xiang Zhou ◽  
...  
Keyword(s):  
Species Richness ◽  
Large Scale ◽  
Net Primary Productivity ◽  
Model Averaging ◽  
Ordinary Least Squares ◽  
Environmental Variable ◽  
Vital Role ◽  
Mean Annual Temperature ◽  
Spatial Error ◽  
Richness Patterns

Although many hypotheses have been proposed to understand the mechanisms underlying large-scale richness patterns, the environmental determinants are still poorly understood, particularly in insects. Here, we tested the relative contributions of seven hypotheses previously proposed to explain planthopper richness patterns in China. The richness patterns were visualized at a 1° × 1° grid size, using 14,722 distribution records for 1335 planthoppers. We used ordinary least squares and spatial error simultaneous autoregressive models to examine the relationships between richness and single environmental variables and employed model averaging to assess the environmental variable relative roles. Species richness was unevenly distributed, with high species numbers occurring in the central and southern mountainous areas. The mean annual temperature change since the Last Glacial Maximum was the most important factor for richness patterns, followed by mean annual temperature and net primary productivity. Therefore, historical climate stability, ambient energy, and productivity hypotheses were supported strongly, but orogenic processes and geological isolation may also play a vital role.

scholarly journals Explaining the ocean's richest biodiversity hotspot and global patterns of fish diversity

2018 ◽  
Vol 285 (1888) ◽  
pp. 20181314 ◽  
Author(s):  
Elizabeth Christina Miller ◽  
Kenji T. Hayashi ◽  
Dongyuan Song ◽  
John J. Wiens
Keyword(s):  
Large Scale ◽  
Fish Diversity ◽  
Relative Importance ◽  
Diversification Rates ◽  
Marine Habitats ◽  
History Of ◽  
Richness Patterns ◽  
Colonization Time ◽  
Almost All

For most marine organisms, species richness peaks in the Central Indo-Pacific region and declines longitudinally, a striking pattern that remains poorly understood. Here, we used phylogenetic approaches to address the causes of richness patterns among global marine regions, comparing the relative importance of colonization time, number of colonization events, and diversification rates (speciation minus extinction). We estimated regional richness using distributional data for almost all percomorph fishes (17 435 species total, including approximately 72% of all marine fishes and approximately 33% of all freshwater fishes). The high diversity of the Central Indo-Pacific was explained by its colonization by many lineages 5.3–34 million years ago. These relatively old colonizations allowed more time for richness to build up through in situ diversification compared to other warm-marine regions. Surprisingly, diversification rates were decoupled from marine richness patterns, with clades in low-richness cold-marine habitats having the highest rates. Unlike marine richness, freshwater diversity was largely derived from a few ancient colonizations, coupled with high diversification rates. Our results are congruent with the geological history of the marine tropics, and thus may apply to many other organisms. Beyond marine biogeography, we add to the growing number of cases where colonization and time-for-speciation explain large-scale richness patterns instead of diversification rates.

Does habitat use explain large scale species richness patterns of aquatic beetles in Europe?

Ecography ◽  
2003 ◽  
Vol 26 (2) ◽  
pp. 145-152 ◽  
Author(s):  
Ignacio Ribera ◽  
Garth N. Foster ◽  
Alfried P. Vogler
Keyword(s):  
Species Richness ◽  
Habitat Use ◽  
Large Scale ◽  
Aquatic Beetles ◽  
Richness Patterns

scholarly journals Spatial Pattern of Species Richness among Terrestrial Mammals in China

Diversity ◽  
2020 ◽  
Vol 12 (3) ◽  
pp. 96
Author(s):  
Yao Chi ◽  
Jiechen Wang ◽  
Changbai Xi ◽  
Tianlu Qian ◽  
Caiying Sheng
Keyword(s):  
Species Richness ◽  
Spatial Pattern ◽  
Large Scale ◽  
Negative Relationship ◽  
Geographical Information ◽  
Western China ◽  
Strongly Correlated ◽  
Terrestrial Mammals ◽  
Richness Patterns ◽  
Forested Ecosystems

We describe large-scale patterns of terrestrial mammal distribution in China by using geographical information system (GIS) spatial analysis. Mammal taxa, examined by species, family, and order, were binned into 10 km × 10 km grids to explore the relationship between their spatial distribution and geographical factors potentially affecting the same. The spatial pattern of species richness revealed four agglomerations: high richness in the south, low in north, and two low richness areas in eastern and western China. Species richness patterns in Carnivora was the most similar to overall terrestrial mammals’ richness; however, species richness in different orders exhibited distributions distinct from the overall pattern. We found a negative relationship between richness and latitude gradient. Species richness was most strongly correlated with forested ecosystems, and was found to be higher at an elevation of 2000~2200 m, with greater altitudinal variation indicative of higher species richness.

scholarly journals Can net diversification rates account for spatial patterns of species richness?

2017 ◽  
Author(s):  
Camilo Sanín ◽  
Iván Jiménez ◽  
Jon Fjeldså ◽  
Carsten Rahbek ◽  
Carlos Daniel Cadena
Keyword(s):  
Species Richness ◽  
Spatial Variation ◽  
Spatial Patterns ◽  
Explanatory Power ◽  
Large Family ◽  
Diversification Rate ◽  
Diversification Rates ◽  
Grain Sizes ◽  
Time Period ◽  
Richness Patterns

ABSTRACTThe diversification rate hypothesis (DRH) proposes that spatial patterns of species richness result from spatial variation in net diversification rates. We developed an approach using a time-calibrated phylogeny and distributional data to estimate the maximum explanatory power of the DRH, over a given time period, to current species richness in an area. We used this approach to study species richness patterns of a large family of suboscine birds across South America. The maximum explanatory power of the DRH increased with the duration of the time period considered and grain size; it ranged from 13 – 37 fold local increases in species richness for T = 33 Ma to less than 2-fold increases for T ≤ 10 Ma. For large grain sizes (≤ 8° × 8°) diversification rate over the last 10 Ma could account for all the spatial variance in species richness, but for smaller grain sizes commonly used in biogeographical studies (1° × 1°), it could only explain < 16% of this variance. Thus, diversification since the Late Miocene, often thought to be a major determinant of Neotropical diversity, had a limited imprint on spatial richness patterns at small grain sizes. Further application of our approach will help determine the role of the DRH in explaining current spatial patterns of species richness.Note to readersThis manuscript has been seen by a few researchers, some of whom suggested that before publishing our work in a peer-reviewed journal we should conduct simulations to demonstrate that our methods properly estimate the contribution of variance in diversification rates to spatial variation in species richness. Although we believe that our approach derives logically from theory and statistics and is therefore valid, we understand that it is rather unique and see why some readers would think that an independent validation is necessary. Unable to complete such validation in the near future, however, we decided to make this manuscript available as a preprint to share our ideas and hopefully stimulate discussion on what we believe is a most interesting topic. We also hope to receive feedback that may enable us to improve our work for publication in a journal at a later date.

scholarly journals Digging their own macroevolutionary grave: fossoriality as an evolutionary dead end in snakes

2018 ◽  
Author(s):  
Vivek Philip Cyriac ◽  
Ullasa Kodandaramaiah
Keyword(s):  
Species Richness ◽  
Phylogenetic Comparative Methods ◽  
Transition Rates ◽  
Ecological Interactions ◽  
Ecological Specialization ◽  
Diversification Rates ◽  
Mixed Support ◽  
Dead End ◽  
Broad Scale ◽  
Lineage Diversification

The tree of life is highly asymmetrical in its clade wise species richness and this has often been attributed to variation in diversification rates either across time or lineages. Variations across lineages are usually associated with traits that increase lineage diversification. Certain traits can also hinder diversification by increasing extinction and such traits are called evolutionary dead-ends. Ecological specialization has usually been considered as an evolutionary dead-end. However, recent analyses of specializations along single axes have provided mixed support for this model. Here, we test if fossoriality, a trait that forces specialization at multiple axes, acts as an evolutionary dead-end in squamates (lizards and snakes) using recently developed phylogenetic comparative methods. We show that fossoriality is an evolutionary dead-end in snakes but not in lizards. Fossorial snakes exhibit reduced speciation and increased extinction compared to non-fossorial snakes. Our analysis also indicates that transition rates from fossoriality to non-fossoriality in snakes are significantly lower than transition rates from non-fossoriality to fossoriality. Overall our results suggest that broad scale ecological interactions that lead to specialization at multiple axes limit diversification.

scholarly journals Cooperate-and-radiate co-evolution between ants and plants

2018 ◽  
Author(s):  
Katrina M. Kaur ◽  
Pierre-Jean G. Malé ◽  
Erik Spence ◽  
Crisanto Gomez ◽  
Megan E. Frederickson
Keyword(s):  
Text Mining ◽  
Seed Dispersal ◽  
Comparative Methods ◽  
Species Level ◽  
Phylogenetic Comparative Methods ◽  
Diversification Rates ◽  
Ecological Interaction ◽  
Recent Species ◽  
Lineage Diversification ◽  
Key Innovations

AbstractMutualisms may be “key innovations” that spur diversification in one partner lineage, but no study has evaluated whether mutualism accelerates diversification in both interacting lineages. Recent research suggests that plants that attract ant mutualists for defense or seed dispersal have higher diversification rates than non-ant associated plant lineages. We ask whether the reciprocal is true: does the ecological interaction between ants and plants also accelerate diversification in ants? In other words, do ants and plants cooperate-and-radiate? We used a novel text-mining approach to determine which ant species associate with plants in defensive or seed dispersal mutualisms. We investigated patterns of trait evolution and lineage diversification using phylogenetic comparative methods on a large, recent species-level ant phylogeny. We found that ants that associate mutualistically with plants have elevated diversification rates compared to non-mutualistic ants, suggesting that ants and plants cooperate-and-radiate.

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