scholarly journals Diel periodicity of grazing by heterotrophic nanoflagellates influenced by prey cell properties and intrinsic grazing rhythm

2016 ◽  
Vol 38 (3) ◽  
pp. 636-651 ◽  
Author(s):  
Wai Ho Albert Ng ◽  
Hongbin Liu
2020 ◽  
Vol 85 ◽  
pp. 131-139
Author(s):  
S Shen ◽  
Y Shimizu

Despite the importance of bacterial cell volume in microbial ecology in aquatic environments, literature regarding the effects of seasonal and spatial variations on bacterial cell volume remains scarce. We used transmission electron microscopy to examine seasonal and spatial variations in bacterial cell size for 18 mo in 2 layers (epilimnion 0.5 m and hypolimnion 60 m) of Lake Biwa, Japan, a large and deep freshwater lake. During the stratified period, we found that the bacterial cell volume in the hypolimnion ranged from 0.017 to 0.12 µm3 (median), whereas that in the epilimnion was less variable (0.016 to 0.033 µm3, median) and much lower than that in the hypolimnion. Additionally, in the hypolimnion, cell volume during the stratified period was greater than that during the mixing period (up to 5.7-fold). These differences in cell volume resulted in comparable bacterial biomass in the hypolimnion and epilimnion, despite the fact that there was lower bacterial abundance in the hypolimnion than in the epilimnion. We also found that the biomass of larger bacteria, which are not likely to be grazed by heterotrophic nanoflagellates, increased in the hypolimnion during the stratified period. Our data suggest that estimation of carbon flux (e.g. bacterial productivity) needs to be interpreted cautiously when cell volume is used as a constant parametric value. In deep freshwater lakes, a difference in cell volume with seasonal and spatial variation may largely affect estimations.


2005 ◽  
Vol 27 (9) ◽  
pp. 923-935 ◽  
Author(s):  
Johnny Berglund ◽  
Kristina Samuelsson ◽  
Tomas Kull ◽  
Umut Müren ◽  
Agneta Andersson

2010 ◽  
Vol 192 (24) ◽  
pp. 6329-6335 ◽  
Author(s):  
A. K. Fenton ◽  
M. Kanna ◽  
R. D. Woods ◽  
S.-I. Aizawa ◽  
R. E. Sockett

ABSTRACT The Bdellovibrio are miniature “living antibiotic” predatory bacteria which invade, reseal, and digest other larger Gram-negative bacteria, including pathogens. Nutrients for the replication of Bdellovibrio bacteria come entirely from the digestion of the single invaded bacterium, now called a bdelloplast, which is bound by the original prey outer membrane. Bdellovibrio bacteria are efficient digesters of prey cells, yielding on average 4 to 6 progeny from digestion of a single prey cell of a genome size similar to that of the Bdellovibrio cell itself. The developmental intrabacterial cycle of Bdellovibrio is largely unknown and has never been visualized “live.” Using the latest motorized xy stage with a very defined z-axis control and engineered periplasmically fluorescent prey allows, for the first time, accurate return and visualization without prey bleaching of developing Bdellovibrio cells using solely the inner resources of a prey cell over several hours. We show that Bdellovibrio bacteria do not follow the familiar pattern of bacterial cell division by binary fission. Instead, they septate synchronously to produce both odd and even numbers of progeny, even when two separate Bdellovibrio cells have invaded and develop within a single prey bacterium, producing two different amounts of progeny. Evolution of this novel septation pattern, allowing odd progeny yields, allows optimal use of the finite prey cell resources to produce maximal replicated, predatory bacteria. When replication is complete, Bdellovibrio cells exit the exhausted prey and are seen leaving via discrete pores rather than by breakdown of the entire outer membrane of the prey.


2002 ◽  
Vol 25 (1) ◽  
pp. 100-108 ◽  
Author(s):  
Teresa Guindulain Rifà ◽  
Ainhoa Latatu ◽  
Begoña Ayo ◽  
Juan Iriberri ◽  
Jaume Comas-Riu ◽  
...  

2006 ◽  
Vol 57 (4) ◽  
pp. 441 ◽  
Author(s):  
M. Alvarez-Cobelas ◽  
A. Baltanás ◽  
J. L. Velasco ◽  
C. Rojo

Few studies have been undertaken on zooplankton dynamics during the transition from late stratification to early mixing in lakes. The Plankton Ecology Group (PEG) model of plankton seasonality only considers water temperature, edible phytoplankton and fish predation as zooplankton-controlling factors during that period. The water-column edible algal and bacterial fractions, heterotrophic nanoflagellates, ciliates, rotifers, cladocerans and copepods were studied during 93 consecutive days of mixing-transition in a wind-sheltered, Mediterranean lake without planktivorous fish. Abundances of all zooplankton populations except ciliates, Daphnia longispina and copepodites, were related to water temperature. In addition to PEG controlling factors, time series analysis indicated competition between ciliates and Ceriodaphnia reticulata and Polyarthra dolichoptera and D. longispina, predation of Arctodiaptomus salinus on ciliates, herbivory of adult copepods on the 5–20 μm phytoplanktonic size and delayed effects shorter than one week. The remaining zooplankton populations did not show any edible size preference. Ceriodaphnia reticulata showed evidence of herbivory on bacteria and picoplankton and competition with Hexarthra fennica in shorter periods. Phyto- and zooplankton production were decoupled. These results, and others from warmer periods and latitudes, suggest that the current model of lake plankton seasonality must be reviewed.


2013 ◽  
Vol 24 (4) ◽  
pp. 427-437
Author(s):  
Danielle Goeldner Pereira ◽  
Fábio Amodêo Lansac-Tôha ◽  
Gustavo Mayer Pauleto ◽  
Luis Mauricio Bini ◽  
Luiz Felipe Machado Velho

AIM: We experimentally investigated the effects of nutrients (Nitrogen and Phosphorus) enrichment on the density, biomass, and cell size of pigmented and heterotrophic plankton nanoflagellates communities. METHODS: The experiment was done in mesocosms in a tropical reservoir during a 19-day period. Four different treatments were carried out: Control (non-nutrient addition - C), phosphorus additions (P), nitrogen addition (N) and phosphorus + nitrogen addition (N + P). Each treatment was performed in triplicate, sorted randomly, thus giving a total of 12 experimental carboys, which were placed transversely in the middle of the reservoir. RESULTS: In general, pigmented and heterotrophic nanoflagellates fractions responded to nutrient addition, increasing densities and biomass values at the fertilized treatments. Opposed to expected, enriched treatments resulted in a slight decrease in mean cell size of the pigmented fraction. Moreover, in nutrient-rich treatments, pigmented nanoflagellates had higher relative abundance than in the control. CONCLUSIONS: Our results indicate that: i) the density and biomass of nanoflagellates responded to the nutrient enrichment, mainly when N and P were added together; ii) the pigmented and heterotrophic fractions showed distinct time responses to fertilization; iii) the growth of nanoflagellate community seems to be co-limited by N and P; iv) the nutrient enrichment led to a greater pigmented than heterotrophic fraction contribution; and v) among the analyzed variables, nanoflagellate densities seem to be more sensitive to changes in nutrient availability than biomass or mean cell size.


2016 ◽  
Vol 20 (8) ◽  
pp. 3411-3418 ◽  
Author(s):  
Masahiro Ryo ◽  
Marie Leys ◽  
Christopher T. Robinson

Abstract. Temperature models that directly predict ecologically important thermal attributes across spatiotemporal scales are still poorly developed. This study developed an analytical method based on Fourier analysis to estimate seasonal and diel periodicities, as well as irregularities in stream temperature, at data-poor sites. The method extrapolates thermal attributes from highly resolved temperature data at a reference site to the data-poor sites on the assumption of spatial autocorrelation. We first quantified the thermal attributes of a glacier-fed stream in the Swiss Alps using 2 years of hourly recorded temperature. Our approach decomposed stream temperature into its average temperature of 3.8 °C, a diel periodicity of 4.9 °C, seasonal periodicity spanning 7.5 °C, and the remaining irregularity (variance) with an average of 0.0 °C but spanning 9.7 °C. These attributes were used to estimate thermal characteristics at upstream sites where temperatures were measured monthly, and we found that a diel periodicity and the variance strongly contributed to the variability at the sites. We evaluated the performance of our predictive mechanism and found that our approach can reasonably estimate periodic components and extremes. We could also estimate the variability in irregularity, which cannot be represented by other techniques that assume a linear relationship in temperature variabilities between sites. The results confirm that spatially extrapolating thermal attributes based on Fourier analysis can predict thermal characteristics at a data-poor site. The R scripts used in this study are available in the Supplement.


eLife ◽  
2021 ◽  
Vol 10 ◽  
Author(s):  
Sofiene Seef ◽  
Julien Herrou ◽  
Paul de Boissier ◽  
Laetitia My ◽  
Gael Brasseur ◽  
...  

Myxococcus xanthus, a soil bacterium, predates collectively using motility to invade prey colonies. Prey lysis is mostly thought to rely on secreted factors, cocktails of antibiotics and enzymes, and direct contac with Myxococcus cells. In this study, we show that on surfaces the coupling of A-motility and contact-dependent killing is the central predatory mechanism driving effective prey colony invasion and consumption. At the molecular level, contact-dependent killing involves a newly discovered type IV filament-like machinery (Kil) that both promotes motility arrest and prey cell plasmolysis. In this process, Kil proteins assemble at the predator-prey contact site, suggesting that they allow tight contact with prey cells for their intoxication. Kil-like systems form a new class of Tad-like machineries in predatory bacteria, suggesting a conserved function in predator-prey interactions. This study further reveals a novel cell-cell interaction function for bacterial pili-like assemblages.


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