scholarly journals Structural basis for translation termination by archaeal RF1 and GTP-bound EF1α complex

2012 ◽  
Vol 40 (18) ◽  
pp. 9319-9328 ◽  
Author(s):  
Kan Kobayashi ◽  
Kazuki Saito ◽  
Ryuichiro Ishitani ◽  
Koichi Ito ◽  
Osamu Nureki
Nature ◽  
2016 ◽  
Vol 541 (7638) ◽  
pp. 546-549 ◽  
Author(s):  
Paul Huter ◽  
Claudia Müller ◽  
Bertrand Beckert ◽  
Stefan Arenz ◽  
Otto Berninghausen ◽  
...  

Nature ◽  
2008 ◽  
Vol 454 (7206) ◽  
pp. 852-857 ◽  
Author(s):  
Martin Laurberg ◽  
Haruichi Asahara ◽  
Andrei Korostelev ◽  
Jianyu Zhu ◽  
Sergei Trakhanov ◽  
...  

2016 ◽  
Vol 7 (1) ◽  
Author(s):  
Xuhua Tang ◽  
Yiping Zhu ◽  
Stacey L. Baker ◽  
Matthew W. Bowler ◽  
Benjamin Jieming Chen ◽  
...  

2018 ◽  
Author(s):  
Wenfei Li ◽  
Fred R. Ward ◽  
Kim F. McClure ◽  
Stacey Tsai-Lan Chang ◽  
Elizabeth Montabana ◽  
...  

AbstractSmall molecules that target the ribosome generally have a global impact on protein synthesis. However, the drug-like molecule PF-06446846 (PF846) binds the human ribosome and selectively blocks the translation of a small subset of proteins by an unknown mechanism. In high-resolution cryo-electron microscopy (cryo-EM) structures of human ribosome nascent chain complexes stalled by PF846, PF846 binds in the ribosome exit tunnel in a newly-identified and eukaryotic-specific pocket formed by the 28S ribosomal RNA (rRNA), and redirects the path of the nascent polypeptide chain. PF846 arrests the translating ribosome in the rotated state that precedes mRNA and tRNA translocation, with peptidyl-tRNA occupying a mixture of A/A and hybrid A/P sites, in which the tRNA 3’-CCA end is improperly docked in the peptidyl transferase center. Using mRNA libraries, selections of PF846-dependent translation elongation stalling sequences reveal sequence preferences near the peptidyl transferase center, and uncover a newly-identified mechanism by which PF846 selectively blocks translation termination. These results illuminate how a small molecule selectively stalls the translation of the human ribosome, and provides a structural foundation for developing small molecules that inhibit the production of proteins of therapeutic interest.


2019 ◽  
Vol 116 (3) ◽  
pp. 574a-575a ◽  
Author(s):  
Ziao Fu ◽  
Gabriele Indrisiunaite ◽  
Sandip Kaledhonkar ◽  
Binita Shah ◽  
Ming Sun ◽  
...  

2021 ◽  
Author(s):  
Eva Kummer ◽  
Katharina Noel Schubert ◽  
Tanja Schoenhut ◽  
Alain Scaiola ◽  
Nenad Ban

2016 ◽  
Vol 428 (10) ◽  
pp. 2228-2236 ◽  
Author(s):  
Egor Svidritskiy ◽  
Rohini Madireddy ◽  
Andrei A. Korostelev

Author(s):  
B. Van Deurs ◽  
J. K. Koehler

The choroid plexus epithelium constitutes a blood-cerebrospinal fluid (CSF) barrier, and is involved in regulation of the special composition of the CSF. The epithelium is provided with an ouabain-sensitive Na/K-pump located at the apical surface, actively pumping ions into the CSF. The choroid plexus epithelium has been described as “leaky” with a low transepithelial resistance, and a passive transepithelial flux following a paracellular route (intercellular spaces and cell junctions) also takes place. The present report describes the structural basis for these “barrier” properties of the choroid plexus epithelium as revealed by freeze fracture.Choroid plexus from the lateral, third and fourth ventricles of rats were used. The tissue was fixed in glutaraldehyde and stored in 30% glycerol. Freezing was performed either in liquid nitrogen-cooled Freon 22, or directly in a mixture of liquid and solid nitrogen prepared in a special vacuum chamber. The latter method was always used, and considered necessary, when preparations of complementary (double) replicas were made.


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