scholarly journals EST assembly supported by a draft genome sequence: an analysis of the Chlamydomonas reinhardtii transcriptome

2007 ◽  
Vol 35 (6) ◽  
pp. 2074-2083 ◽  
Author(s):  
Monica Jain ◽  
Jeff Shrager ◽  
Elizabeth H. Harris ◽  
Renee Halbrook ◽  
Arthur R. Grossman ◽  
...  
Keyword(s):  
Chlamydomonas Reinhardtii ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Est Assembly

scholarly journals Draft Genome Sequence of Trebouxiophyceae sp. Strain KSI-1, Isolated from an Island Hot Spring

2018 ◽  
Vol 7 (16) ◽  
Author(s):  
Hiro Takahashi ◽  
Satoshi Tanaka ◽  
Shuhei Hayashi ◽  
Shido Miyaki ◽  
Anna Takahashi ◽  
...  
Keyword(s):  
Oxidative Stress ◽  
Green Alga ◽  
Genome Sequence ◽  
Hot Spring ◽  
Draft Genome ◽  
Draft Genome Sequence

Trebouxiophyceae sp. KSI-1 is a green alga isolated from a seashore hot spring on Satsuma Iōjima in Kagoshima, Japan, and is highly tolerant to oxidative stress.

scholarly journals Draft Genome Sequence of Urease-Producing Pseudorhodobacter sp. Strain E13, Isolated from the Yellow Sea in Gunsan, South Korea

2019 ◽  
Vol 8 (23) ◽  
Author(s):  
Si Chul Kim ◽  
Hyo Jung Lee
Keyword(s):  
South Korea ◽  
Genome Sequence ◽  
Yellow Sea ◽  
Draft Genome ◽  
The Yellow Sea ◽  
Draft Genome Sequence ◽  
Protein Coding ◽  
Coding Sequences ◽  
Gram Negative ◽  
Content Type

Here, we report the draft genome sequence of Pseudorhodobacter sp. strain E13, a Gram-negative, aerobic, nonflagellated, and rod-shaped bacterium which was isolated from the Yellow Sea in South Korea. The assembled genome sequence is 3,878,578 bp long with 3,646 protein-coding sequences in 159 contigs.

scholarly journals Draft Genome Sequence of Saccharomonospora sp. Strain LRS4.154, a Moderately Halophilic Actinobacterium with the Biotechnologically Relevant Polyketide Synthase and Nonribosomal Peptide Synthetase Systems

2017 ◽  
Vol 5 (21) ◽  
Author(s):  
Scarlett Alonso-Carmona ◽  
Blanca Vera-Gargallo ◽  
Rafael R. de la Haba ◽  
Antonio Ventosa ◽  
Horacio Sandoval-Trujillo ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Polyketide Synthase ◽  
Draft Genome ◽  
Nonribosomal Peptide Synthetase ◽  
Open Reading Frames ◽  
Draft Genome Sequence ◽  
Nonribosomal Peptide ◽  
Moderately Halophilic ◽  
Peptide Synthetase ◽  
Reading Frames

ABSTRACT The draft genome sequence of Saccharomonospora sp. strain LRS4.154, a moderately halophilic actinobacterium, has been determined. The genome has 4,860,108 bp, a G+C content of 71.0%, and 4,525 open reading frames (ORFs). The clusters of PKS and NRPS genes, responsible for the biosynthesis of a large number of biomolecules, were identified in the genome.

scholarly journals Draft genome sequence data of the facultative, thermophilic, xylanolytic bacterium Paenibacillus sp. strain DA-C8

Data in Brief ◽  
2021 ◽  
Vol 35 ◽  
pp. 106784
Author(s):  
Chinda Chhe ◽  
Ayaka Uke ◽  
Sirilak Baramee ◽  
Umbhorn Ungkulpasvich ◽  
Chakrit Tachaapaikoon ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Sequence Data ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Genome Sequence Data ◽  
Paenibacillus Sp

scholarly journals High quality draft genome sequence and description of Occidentia massiliensis gen. nov., sp. nov., a new member of the family Rickettsiaceae

2014 ◽  
Vol 9 (1) ◽  
Author(s):  
Oleg Mediannikov ◽  
Thi-Thien Nguyen ◽  
Lesley Bell-Sakyi ◽  
Roshan Padmanabhan ◽  
Pierre-Edouard Fournier ◽  
...  
Keyword(s):  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
High Quality ◽  
The Family

scholarly journals Draft Genome Sequences of Fungus Aspergillus calidoustus

2016 ◽  
Vol 4 (2) ◽  
Author(s):  
Fabian Horn ◽  
Jörg Linde ◽  
Derek J. Mattern ◽  
Grit Walther ◽  
Reinhard Guthke ◽  
...  
Keyword(s):  
Secondary Metabolite ◽  
Genome Sequence ◽  
Functional Annotation ◽  
Draft Genome ◽  
Genome Mining ◽  
Gene Clusters ◽  
Draft Genome Sequence ◽  
Genome Sequences

Here, we report the draft genome sequence of Aspergillus calidoustus (strain SF006504) . The functional annotation of A. calidoustus predicts a relatively large number of secondary metabolite gene clusters. The presented genome sequence builds the basis for further genome mining.

scholarly journals Draft Genome Sequence of the Bacterium Gordonia jacobaea , a New Member of the Gordonia Genus

2015 ◽  
Vol 3 (5) ◽  
Author(s):  
G. Jiménez-Galisteo ◽  
T. G. Villa ◽  
T. Vinuesa ◽  
M. Viñas ◽  
A. Domínguez ◽  
...  
Keyword(s):  
Cell Wall ◽  
Genome Sequence ◽  
Draft Genome ◽  
Draft Genome Sequence ◽  
Cell Wall Proteins ◽  
Santiago De Compostela

Gordonia jacobaea was isolated and characterized in the Department of Microbiology, University of Santiago de Compostela, in 2000. Here we present the draft genome sequence of this species, which will improve our understanding of the diversity and the relation of the cell wall proteins of G. jacobaea with other mycolata.

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