scholarly journals Tandem arrayed ligation of expressed sequence tags (TALEST): a new method for generating global gene expression profiles

1999 ◽  
Vol 27 (18) ◽  
pp. 22e-22 ◽  
Author(s):  
D. Spinella
Keyword(s):  
Gene Expression ◽  
Expressed Sequence Tags ◽  
Expression Profiles ◽  
Gene Expression Profiles ◽  
Global Gene Expression ◽  
New Method ◽  
Expressed Sequence

scholarly journals Tandem arrayed Iigation of expressed sequence tags (TALEST): a new method for generating global gene expression profiles

1999 ◽  
Vol 27 (18) ◽  
pp. i-viii
Author(s):  
D. G. Spinella ◽  
A. K. Bernardino ◽  
A. C. Redding ◽  
P. Koutz ◽  
Y. Wei ◽  
...  
Keyword(s):  
Gene Expression ◽  
Expressed Sequence Tags ◽  
Expression Profiles ◽  
Gene Expression Profiles ◽  
Global Gene Expression ◽  
New Method ◽  
Expressed Sequence

scholarly journals Preparing and Analyzing Expressed Sequence Tags (ESTs) Library for the Mammary Tissue of Local Turkish Kivircik Sheep

2017 ◽  
Vol 2017 ◽  
pp. 1-14
Author(s):  
Nehir Ozdemir Ozgenturk ◽  
Zehra Omeroglu Ulu ◽  
Salih Ulu ◽  
Cemal Un ◽  
Kemal Ozdem Oztabak ◽  
...  
Keyword(s):  
Gene Expression ◽  
Expressed Sequence Tags ◽  
Expression Profiles ◽  
Gene Expression Profiles ◽  
Cdna Libraries ◽  
Mammary Tissue ◽  
Mammary Gland Tissue ◽  
Gland Tissue ◽  
Source Of Information ◽  
Expressed Sequence

Kivircik sheep is an important local Turkish sheep according to its meat quality and milk productivity. The aim of this study was to analyze gene expression profiles of both prenatal and postnatal stages for the Kivircik sheep. Therefore, two different cDNA libraries, which were taken from the same Kivircik sheep mammary gland tissue at prenatal and postnatal stages, were constructed. Total 3072 colonies which were randomly selected from the two libraries were sequenced for developing a sheep ESTs collection. We used Phred/Phrap computer programs for analysis of the raw EST and readable EST sequences were assembled with the CAP3 software. Putative functions of all unique sequences and statistical analysis were determined by Geneious software. Total 422 ESTs have over 80% similarity to known sequences of other organisms in NCBI classified by Panther database for the Gene Ontology (GO) category. By comparing gene expression profiles, we observed some putative genes that may be relative to reproductive performance or play important roles in milk synthesis and secretion. A total of 2414 ESTs have been deposited to the NCBI GenBank database (GW996847–GW999260). EST data in this study have provided a new source of information to functional genome studies of sheep.

scholarly journals Analysis of Expressed Sequence Tag Data and Gene Expression Profiles Involved in Conidial Germination of Fusarium oxysporum

2006 ◽  
Vol 72 (2) ◽  
pp. 1667-1671 ◽  
Author(s):  
Ye Deng ◽  
Haitao Dong ◽  
Qingchao Jin ◽  
Cheng'en Dai ◽  
Yongqi Fang ◽  
...  
Keyword(s):  
Gene Expression ◽  
Protein Synthesis ◽  
Fusarium Oxysporum ◽  
Cdna Library ◽  
Expressed Sequence Tag ◽  
Expression Profiles ◽  
Cdna Array ◽  
Gene Expression Profiles ◽  
Conidial Germination ◽  
Expressed Sequence

ABSTRACT We obtained 3,372 tentative unique transcripts (TUTs) from a cDNA library of Fusarium oxysporum. A cDNA array with 3,158 TUTs was produced to analyze gene expression profiles in conidial germination. It seems that ras and other signaling genes, e.g., ccg, cooperatively initiate conidial germination in Fusarium by increasing protein synthesis.

scholarly journals Granulosa cells from human primordial and primary follicles show differential global gene expression profiles

2018 ◽  
Vol 33 (4) ◽  
pp. 666-679 ◽  
Author(s):  
E H Ernst ◽  
S Franks ◽  
K Hardy ◽  
P Villesen ◽  
K Lykke-Hartmann
Keyword(s):  
Gene Expression ◽  
Granulosa Cells ◽  
Expression Profiles ◽  
Gene Expression Profiles ◽  
Global Gene Expression

scholarly journals Dynamical consequences of regional heterogeneity in the brain’s transcriptional landscape

2020 ◽  
Author(s):  
Gustavo Deco ◽  
Kevin Aquino ◽  
Aurina Arnatkevičiūtė ◽  
Stuart Oldham ◽  
Kristina Sabaroedin ◽  
...  
Keyword(s):  
Gene Expression ◽  
Large Scale ◽  
Expression Profiles ◽  
Gene Expression Profiles ◽  
Global Gene Expression ◽  
Brain Regions ◽  
Biophysical Model ◽  
Neuronal Dynamics ◽  
Regional Heterogeneity ◽  
Magnetic Resonance Imaging Mri

AbstractBrain regions vary in their molecular and cellular composition, but how this heterogeneity shapes neuronal dynamics is unclear. Here, we investigate the dynamical consequences of regional heterogeneity using a biophysical model of whole-brain functional magnetic resonance imaging (MRI) dynamics in humans. We show that models in which transcriptional variations in excitatory and inhibitory receptor (E:I) gene expression constrain regional heterogeneity more accurately reproduce the spatiotemporal structure of empirical functional connectivity estimates than do models constrained by global gene expression profiles and MRI-derived estimates of myeloarchitecture. We further show that regional heterogeneity is essential for yielding both ignition-like dynamics, which are thought to support conscious processing, and a wide variance of regional activity timescales, which supports a broad dynamical range. We thus identify a key role for E:I heterogeneity in generating complex neuronal dynamics and demonstrate the viability of using transcriptional data to constrain models of large-scale brain function.

scholarly journals Quantitative Gene Expression Profiles in Real Time From Expressed Sequence Tag Databases

2010 ◽  
Vol 14 (6) ◽  
pp. 321-336 ◽  
Author(s):  
VINCENT A. FUNARI ◽  
KONSTANTIN VOEVODSKI ◽  
DIMITRY LEYFER ◽  
LAURA YERKES ◽  
DONALD CRAMER ◽  
...  
Keyword(s):  
Gene Expression ◽  
Real Time ◽  
Expressed Sequence Tag ◽  
Expression Profiles ◽  
Gene Expression Profiles ◽  
Quantitative Gene Expression ◽  
Expressed Sequence
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