The solution structure of the intramolecular photoproduct of d(TpA) derived with the use of NMR and a combination of distance geometry and molecular dynamics

T.M.G. Koning; R.J.H. Davies; R. Kaptein

doi:10.1093/nar/18.2.277

The solution structure of the intramolecular photoproduct of d(TpA) derived with the use of NMR and a combination of distance geometry and molecular dynamics

Nucleic Acids Research ◽

10.1093/nar/18.2.277 ◽

1990 ◽

Vol 18 (2) ◽

pp. 277-284 ◽

Cited By ~ 18

Author(s):

T.M.G. Koning ◽

R.J.H. Davies ◽

R. Kaptein

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Distance Geometry

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The solution structure of motilin from NMR distance constraints, distance geometry, molecular dynamics, and an iterative full relaxation matrix refinement

Biochemistry ◽

10.1021/bi00111a012 ◽

1991 ◽

Vol 30 (47) ◽

pp. 11271-11279 ◽

Cited By ~ 21

Author(s):

S. Edmondson ◽

N. Khan ◽

J. Shriver ◽

J. Zdunek ◽

A. Graeslund

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Distance Geometry ◽

Distance Constraints ◽

Relaxation Matrix ◽

Full Relaxation ◽

Relaxation Matrix Refinement

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Solution structure of human corticotropin releasing factor by 1H NMR and distance geometry with restrained molecular dynamics

Protein Engineering Design and Selection ◽

10.1093/protein/6.2.149 ◽

1993 ◽

Vol 6 (2) ◽

pp. 149-156 ◽

Cited By ~ 29

Author(s):

Christophe Romier ◽

Jean-Marie Bernassau ◽

Christian Cambillau ◽

Hervé Darbon

Keyword(s):

Molecular Dynamics ◽

1H Nmr ◽

Solution Structure ◽

Distance Geometry ◽

Corticotropin Releasing Factor ◽

Restrained Molecular Dynamics

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Solution structure of human calcitonin gene-related peptide by proton NMR and distance geometry with restrained molecular dynamics

Biochemistry ◽

10.1021/bi00216a036 ◽

1991 ◽

Vol 30 (2) ◽

pp. 575-582 ◽

Cited By ~ 59

Author(s):

Alexander L. Breeze ◽

Timothy S. Harvey ◽

Renzo Bazzo ◽

Iain D. Campbell

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Distance Geometry ◽

Proton Nmr ◽

Calcitonin Gene Related Peptide ◽

Human Calcitonin ◽

Related Peptide ◽

Calcitonin Gene ◽

Restrained Molecular Dynamics

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Investigation of the solution structure of the human parathyroid hormone fragment (1-34) by proton NMR spectroscopy, distance geometry, and molecular dynamics calculations

Biochemistry ◽

10.1021/bi00242a018 ◽

1991 ◽

Vol 30 (28) ◽

pp. 6936-6942 ◽

Cited By ~ 69

Author(s):

Werner Klaus ◽

Thorsten Dieckmann ◽

Victor Wray ◽

Dietmar Schomburg ◽

Edgar Wingender ◽

...

Keyword(s):

Molecular Dynamics ◽

Parathyroid Hormone ◽

Nmr Spectroscopy ◽

Solution Structure ◽

Distance Geometry ◽

Proton Nmr ◽

Proton Nmr Spectroscopy ◽

Human Parathyroid Hormone ◽

Molecular Dynamics Calculations

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Solution structure of neurotoxin I from the sea anemone Stichodactyla helianthus. A nuclear magnetic resonance, distance geometry, and restrained molecular dynamics study.

Journal of Biological Chemistry ◽

10.1016/s0021-9258(19)38261-4 ◽

1990 ◽

Vol 265 (22) ◽

pp. 13016-13028

Author(s):

R H Fogh ◽

W R Kem ◽

R S Norton

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Magnetic Resonance ◽

Solution Structure ◽

Distance Geometry ◽

Sea Anemone ◽

Restrained Molecular Dynamics ◽

Nuclear Magnetic

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The solution structure of a monomeric insulin. A two-dimensional 1H-NMR study of des-(B26-B30)-insulin in combination with distance geometry and restrained molecular dynamics

European Journal of Biochemistry ◽

10.1111/j.1432-1033.1991.tb16394.x ◽

1991 ◽

Vol 202 (2) ◽

pp. 447-458 ◽

Cited By ~ 19

Author(s):

Ronald M. A. KNEGTEL ◽

Rolf BOELENS ◽

Maria Luisa GANADU ◽

Robert KAPTEIN

Keyword(s):

Molecular Dynamics ◽

1H Nmr ◽

Solution Structure ◽

Distance Geometry ◽

Two Dimensional ◽

Nmr Study ◽

Monomeric Insulin ◽

Restrained Molecular Dynamics

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Combined procedure of distance geometry and restrained molecular dynamics techniques for protein structure determination from nuclear magnetic resonance data: Application to the DNA binding domain of lac repressor fromEscherichia coli

Proteins Structure Function and Bioinformatics ◽

10.1002/prot.340030402 ◽

1988 ◽

Vol 3 (4) ◽

pp. 209-218 ◽

Cited By ~ 52

Author(s):

J. de Vlieg ◽

R. M. Scheek ◽

W. F. van Gunsteren ◽

H. J. C. Berendsen ◽

R. Kaptein ◽

...

Keyword(s):

Molecular Dynamics ◽

Nuclear Magnetic Resonance ◽

Distance Geometry ◽

Protein Structure Determination ◽

Lac Repressor ◽

Dna Binding Domain ◽

Combined Procedure ◽

Magnetic Resonance Data ◽

Data Application ◽

Resonance Data

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Effects of Urea, Tetramethyl Urea, and TrimethylamineN-Oxide on Aqueous Solution Structure and Solvation of Protein Backbones: A Molecular Dynamics Simulation Study

The Journal of Physical Chemistry B ◽

10.1021/jp9084926 ◽

2010 ◽

Vol 114 (1) ◽

pp. 557-568 ◽

Cited By ~ 128

Author(s):

Haiyan Wei ◽

Yubo Fan ◽

Yi Qin Gao

Keyword(s):

Molecular Dynamics ◽

Aqueous Solution ◽

Molecular Dynamics Simulation ◽

Simulation Study ◽

Solution Structure ◽

Dynamics Simulation ◽

Protein Backbones

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Determination of the three-dimensional solution structure of the antihypertensive and antiviral protein BDS-I from the sea anemone Anemonia sulcata: a study using nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing

Biochemistry ◽

10.1021/bi00431a033 ◽

1989 ◽

Vol 28 (5) ◽

pp. 2188-2198 ◽

Cited By ~ 107

Author(s):

Paul C. Driscoll ◽

Angela M. Gronenborn ◽

Laszlo Beress ◽

G. Marius Clore

Keyword(s):

Nuclear Magnetic Resonance ◽

Simulated Annealing ◽

Solution Structure ◽

Distance Geometry ◽

Three Dimensional ◽

Antiviral Protein ◽

Dimensional Solution ◽

Anemonia Sulcata ◽

Hybrid Distance

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Investigation of the solution structure of chymotrypsin inhibitor 2 using molecular dynamics: comparison to X-ray crystallographic and NMR data

Protein Engineering Design and Selection ◽

10.1093/protein/8.11.1117 ◽

1995 ◽

Vol 8 (11) ◽

pp. 1117-1128 ◽

Cited By ~ 33

Author(s):

Aijun Li ◽

Valerie Daggett

Keyword(s):

Molecular Dynamics ◽

Solution Structure ◽

Chymotrypsin Inhibitor ◽

X Ray ◽

Chymotrypsin Inhibitor 2 ◽

Nmr Data

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